BLASTX nr result
ID: Zingiber24_contig00023796
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00023796
(422 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006857008.1| hypothetical protein AMTR_s00197p00027080 [A... 145 4e-33
gb|EOY06353.1| SC35-like splicing factor 28 isoform 2 [Theobroma... 138 7e-31
gb|EOY06352.1| SC35-like splicing factor 28 isoform 1 [Theobroma... 138 7e-31
gb|EPS63010.1| hypothetical protein M569_11776, partial [Genlise... 137 2e-30
ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216... 136 3e-30
gb|EMJ28740.1| hypothetical protein PRUPE_ppa010343mg [Prunus pe... 136 3e-30
gb|EMJ28739.1| hypothetical protein PRUPE_ppa010343mg [Prunus pe... 136 3e-30
ref|XP_004984295.1| PREDICTED: serine/arginine-rich splicing fac... 131 1e-28
ref|XP_002516840.1| serine/arginine rich splicing factor, putati... 130 1e-28
ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262... 129 3e-28
gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transc... 129 4e-28
ref|XP_002467817.1| hypothetical protein SORBIDRAFT_01g034590 [S... 129 4e-28
gb|EXC05700.1| Serine/arginine-rich splicing factor 12 [Morus no... 128 7e-28
gb|ABK26743.1| unknown [Picea sitchensis] 128 7e-28
gb|ESW26205.1| hypothetical protein PHAVU_003G099500g [Phaseolus... 128 9e-28
gb|AGV54347.1| serine/arginine rich splicing factor [Phaseolus v... 128 9e-28
gb|ACU20250.1| unknown [Glycine max] 128 9e-28
gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japo... 127 1e-27
gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indi... 127 1e-27
gb|ABF96108.1| RNA recognition motif family protein, expressed [... 127 1e-27
>ref|XP_006857008.1| hypothetical protein AMTR_s00197p00027080 [Amborella trichopoda]
gi|548861084|gb|ERN18475.1| hypothetical protein
AMTR_s00197p00027080 [Amborella trichopoda]
Length = 183
Score = 145 bits (367), Expect = 4e-33
Identities = 74/97 (76%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYRSA-PSGLLIRNISLDARPEDLRIPFERFGPVKDV 310
K YDDPRDRY D RS+ PSGLLIRNISLDARPEDLRIPFERFGPVKDV
Sbjct: 37 KRYDDPRDRYRDRERHSNRFRDRDRRSSGPSGLLIRNISLDARPEDLRIPFERFGPVKDV 96
Query: 311 YLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
YLPKNYYTGEPRGFGFVKFR +DAA AKQ MN QII
Sbjct: 97 YLPKNYYTGEPRGFGFVKFRNPDDAAEAKQQMNHQII 133
>gb|EOY06353.1| SC35-like splicing factor 28 isoform 2 [Theobroma cacao]
Length = 291
Score = 138 bits (348), Expect = 7e-31
Identities = 70/97 (72%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYRS-APSGLLIRNISLDARPEDLRIPFERFGPVKDV 310
K+ DDPRDR+ D RS APSGLLIRN+ LDARPEDLR+PFER+GPVKDV
Sbjct: 26 KYEDDPRDRHRSHR---------DRRSPAPSGLLIRNLPLDARPEDLRVPFERYGPVKDV 76
Query: 311 YLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
YLPKNYYTGEPRGFGFVKFRY EDAA AKQ MN Q+I
Sbjct: 77 YLPKNYYTGEPRGFGFVKFRYGEDAAEAKQRMNHQVI 113
>gb|EOY06352.1| SC35-like splicing factor 28 isoform 1 [Theobroma cacao]
Length = 308
Score = 138 bits (348), Expect = 7e-31
Identities = 70/97 (72%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYRS-APSGLLIRNISLDARPEDLRIPFERFGPVKDV 310
K+ DDPRDR+ D RS APSGLLIRN+ LDARPEDLR+PFER+GPVKDV
Sbjct: 26 KYEDDPRDRHRSHR---------DRRSPAPSGLLIRNLPLDARPEDLRVPFERYGPVKDV 76
Query: 311 YLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
YLPKNYYTGEPRGFGFVKFRY EDAA AKQ MN Q+I
Sbjct: 77 YLPKNYYTGEPRGFGFVKFRYGEDAAEAKQRMNHQVI 113
>gb|EPS63010.1| hypothetical protein M569_11776, partial [Genlisea aurea]
Length = 228
Score = 137 bits (344), Expect = 2e-30
Identities = 70/97 (72%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYRS-APSGLLIRNISLDARPEDLRIPFERFGPVKDV 310
K YDDPRD D RS APSGLL+RNISL ARPEDLRIPFERFGPVKDV
Sbjct: 19 KRYDDPRDHRR------------DRRSPAPSGLLVRNISLSARPEDLRIPFERFGPVKDV 66
Query: 311 YLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
YLPKNYYTGEPRGFGFVKFRY+EDAA AK H++R +I
Sbjct: 67 YLPKNYYTGEPRGFGFVKFRYSEDAADAKSHLDRTVI 103
>ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED:
uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 136 bits (343), Expect = 3e-30
Identities = 69/97 (71%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYRS-APSGLLIRNISLDARPEDLRIPFERFGPVKDV 310
++ DDPRDRY D RS APSGLL+RN+ LDARPEDLRIPFERFGPVKDV
Sbjct: 26 RYDDDPRDRYRESRSHR------DRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDV 79
Query: 311 YLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
YLPKNYYTGEPRGFGFVKFR+AEDAA AKQ +N +I
Sbjct: 80 YLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVI 116
>gb|EMJ28740.1| hypothetical protein PRUPE_ppa010343mg [Prunus persica]
Length = 253
Score = 136 bits (342), Expect = 3e-30
Identities = 68/97 (70%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYRS-APSGLLIRNISLDARPEDLRIPFERFGPVKDV 310
++ DDPRDRY D RS APSGLL+RN+ LDARPEDLRIPFER+GPVKDV
Sbjct: 26 RYDDDPRDRYRESRSYR------DRRSPAPSGLLVRNLPLDARPEDLRIPFERYGPVKDV 79
Query: 311 YLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
YLPKNYYTGEPRGFGFVK+RYAEDAA AKQ +N +I
Sbjct: 80 YLPKNYYTGEPRGFGFVKYRYAEDAAEAKQQLNHSVI 116
>gb|EMJ28739.1| hypothetical protein PRUPE_ppa010343mg [Prunus persica]
Length = 252
Score = 136 bits (342), Expect = 3e-30
Identities = 68/97 (70%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYRS-APSGLLIRNISLDARPEDLRIPFERFGPVKDV 310
++ DDPRDRY D RS APSGLL+RN+ LDARPEDLRIPFER+GPVKDV
Sbjct: 26 RYDDDPRDRYRESRSYR------DRRSPAPSGLLVRNLPLDARPEDLRIPFERYGPVKDV 79
Query: 311 YLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
YLPKNYYTGEPRGFGFVK+RYAEDAA AKQ +N +I
Sbjct: 80 YLPKNYYTGEPRGFGFVKYRYAEDAAEAKQQLNHSVI 116
>ref|XP_004984295.1| PREDICTED: serine/arginine-rich splicing factor 33-like isoform X1
[Setaria italica]
Length = 242
Score = 131 bits (329), Expect = 1e-28
Identities = 66/97 (68%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYR-SAPSGLLIRNISLDARPEDLRIPFERFGPVKDV 310
KHYDDPRDRY R SA SGLLIRNISL RPED+R+PFE+FGPVKDV
Sbjct: 27 KHYDDPRDRYRGGGGGGGGPRRFYGRPSAQSGLLIRNISLTVRPEDIRVPFEQFGPVKDV 86
Query: 311 YLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
YLP+N++T E RGFGFVKFRY EDAAVAKQ MN Q+I
Sbjct: 87 YLPRNFHTRELRGFGFVKFRYPEDAAVAKQEMNHQVI 123
>ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich
splicing factor, putative [Ricinus communis]
Length = 257
Score = 130 bits (328), Expect = 1e-28
Identities = 69/98 (70%), Positives = 75/98 (76%), Gaps = 3/98 (3%)
Frame = +2
Query: 137 HYDD--PRDRYHXXXXXXXXXXXXDYRS-APSGLLIRNISLDARPEDLRIPFERFGPVKD 307
HYDD PRDR D RS APSGLL+RN+ LDARPEDLR PFE++GPVKD
Sbjct: 27 HYDDEDPRDRRRVTRSHR------DRRSPAPSGLLVRNLPLDARPEDLRGPFEKYGPVKD 80
Query: 308 VYLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
VYLPKNYYTGEPRGFGFVK+RYAEDAA AKQ MN +II
Sbjct: 81 VYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQRMNHKII 118
>ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
gi|298205010|emb|CBI34317.3| unnamed protein product
[Vitis vinifera]
Length = 287
Score = 129 bits (325), Expect = 3e-28
Identities = 62/74 (83%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
Frame = +2
Query: 203 DYRS-APSGLLIRNISLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRYAE 379
D RS APSGLL+RNI+LDARPEDLR+PFERFGPVKDVYLPKNYYTGEPRGFGFVKFR AE
Sbjct: 37 DRRSPAPSGLLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAE 96
Query: 380 DAAVAKQHMNRQII 421
DAA AK H+N +I
Sbjct: 97 DAAEAKHHLNHSVI 110
>gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 129 bits (324), Expect = 4e-28
Identities = 65/97 (67%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYR-SAPSGLLIRNISLDARPEDLRIPFERFGPVKDV 310
K YDDPRDRY R SA SGLLIRNISL ARPED+R+PFE+FGP+KDV
Sbjct: 27 KRYDDPRDRYRWAGAGGGGDRRGYGRPSAQSGLLIRNISLTARPEDIRVPFEQFGPIKDV 86
Query: 311 YLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
YLP+N++T E RGFGFVKFRY EDAAVAKQ MN Q+I
Sbjct: 87 YLPRNFHTRELRGFGFVKFRYPEDAAVAKQEMNHQVI 123
>ref|XP_002467817.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
gi|241921671|gb|EER94815.1| hypothetical protein
SORBIDRAFT_01g034590 [Sorghum bicolor]
Length = 190
Score = 129 bits (324), Expect = 4e-28
Identities = 65/97 (67%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYR-SAPSGLLIRNISLDARPEDLRIPFERFGPVKDV 310
K YDDPRDRY R SA SGLLIRNISL ARPED+R+PFE+FGP+KDV
Sbjct: 27 KRYDDPRDRYRWAGAGGGGDRRGYGRPSAQSGLLIRNISLTARPEDIRVPFEQFGPIKDV 86
Query: 311 YLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
YLP+N++T E RGFGFVKFRY EDAAVAKQ MN Q+I
Sbjct: 87 YLPRNFHTRELRGFGFVKFRYPEDAAVAKQEMNHQVI 123
>gb|EXC05700.1| Serine/arginine-rich splicing factor 12 [Morus notabilis]
Length = 269
Score = 128 bits (322), Expect = 7e-28
Identities = 67/98 (68%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
Frame = +2
Query: 134 KHYDD-PRDRYHXXXXXXXXXXXXDYRS-APSGLLIRNISLDARPEDLRIPFERFGPVKD 307
K YDD PRDR D RS APSGLL+RN+ LDARPEDLR PFER+GPVKD
Sbjct: 27 KRYDDEPRDRRRDRR---------DPRSPAPSGLLVRNLPLDARPEDLRTPFERYGPVKD 77
Query: 308 VYLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
VYLPKNYYTGEPRGFGFVK+RYA+DAA AKQ +N +I
Sbjct: 78 VYLPKNYYTGEPRGFGFVKYRYADDAAEAKQQLNHTVI 115
>gb|ABK26743.1| unknown [Picea sitchensis]
Length = 252
Score = 128 bits (322), Expect = 7e-28
Identities = 66/99 (66%), Positives = 74/99 (74%), Gaps = 3/99 (3%)
Frame = +2
Query: 134 KHYDDPRDR--YHXXXXXXXXXXXXDYRSA-PSGLLIRNISLDARPEDLRIPFERFGPVK 304
K YDD R+R Y D RS P+GLL+RNISLDARPEDLRIPFERFGPVK
Sbjct: 23 KRYDDYREREQYRERDQYRERDRFRDRRSTLPTGLLVRNISLDARPEDLRIPFERFGPVK 82
Query: 305 DVYLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
DVYLPKN+YT EPRGFGFVK+R +DAA AK+HMN Q+I
Sbjct: 83 DVYLPKNFYTREPRGFGFVKYRNHDDAAEAKRHMNHQVI 121
>gb|ESW26205.1| hypothetical protein PHAVU_003G099500g [Phaseolus vulgaris]
Length = 254
Score = 128 bits (321), Expect = 9e-28
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +2
Query: 218 PSGLLIRNISLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRYAEDAAVAK 397
PSGLL+RN+ LDARPEDLRIPFER+GPVKDVYLPKNYYTGEPRGFGFVK+RY EDAA AK
Sbjct: 52 PSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAK 111
Query: 398 QHMNRQII 421
QH+N II
Sbjct: 112 QHLNHTII 119
>gb|AGV54347.1| serine/arginine rich splicing factor [Phaseolus vulgaris]
Length = 261
Score = 128 bits (321), Expect = 9e-28
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +2
Query: 218 PSGLLIRNISLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRYAEDAAVAK 397
PSGLL+RN+ LDARPEDLRIPFER+GPVKDVYLPKNYYTGEPRGFGFVK+RY EDAA AK
Sbjct: 52 PSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAK 111
Query: 398 QHMNRQII 421
QH+N II
Sbjct: 112 QHLNHTII 119
>gb|ACU20250.1| unknown [Glycine max]
Length = 270
Score = 128 bits (321), Expect = 9e-28
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +2
Query: 218 PSGLLIRNISLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRYAEDAAVAK 397
PSGLL+RN+ LDARPEDLRIPFER+GPVKDVYLPKNYYTGEPRGFGFVK+RY EDAA AK
Sbjct: 48 PSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAK 107
Query: 398 QHMNRQII 421
QH+N II
Sbjct: 108 QHLNHTII 115
>gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 127 bits (320), Expect = 1e-27
Identities = 64/101 (63%), Positives = 73/101 (72%), Gaps = 5/101 (4%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYRS-----APSGLLIRNISLDARPEDLRIPFERFGP 298
K YDDPRDRY R AP+GLL+RNISL ARPED+RIPFE+FGP
Sbjct: 27 KRYDDPRDRYPRGGGGGGGGGEGPRRGYGRPPAPTGLLVRNISLTARPEDIRIPFEQFGP 86
Query: 299 VKDVYLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
VKDVYLP+N++T E RGFGFVKFRY EDAAVAKQ +N Q+I
Sbjct: 87 VKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQELNHQVI 127
>gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 127 bits (320), Expect = 1e-27
Identities = 64/101 (63%), Positives = 73/101 (72%), Gaps = 5/101 (4%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYRS-----APSGLLIRNISLDARPEDLRIPFERFGP 298
K YDDPRDRY R AP+GLL+RNISL ARPED+RIPFE+FGP
Sbjct: 27 KRYDDPRDRYPRGGGGGGGGGEGPRRGYGRPPAPTGLLVRNISLTARPEDIRIPFEQFGP 86
Query: 299 VKDVYLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
VKDVYLP+N++T E RGFGFVKFRY EDAAVAKQ +N Q+I
Sbjct: 87 VKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQELNHQVI 127
>gb|ABF96108.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 238
Score = 127 bits (320), Expect = 1e-27
Identities = 64/101 (63%), Positives = 73/101 (72%), Gaps = 5/101 (4%)
Frame = +2
Query: 134 KHYDDPRDRYHXXXXXXXXXXXXDYRS-----APSGLLIRNISLDARPEDLRIPFERFGP 298
K YDDPRDRY R AP+GLL+RNISL ARPED+RIPFE+FGP
Sbjct: 27 KRYDDPRDRYPRGGGGGGGGGEGPRRGYGRPPAPTGLLVRNISLTARPEDIRIPFEQFGP 86
Query: 299 VKDVYLPKNYYTGEPRGFGFVKFRYAEDAAVAKQHMNRQII 421
VKDVYLP+N++T E RGFGFVKFRY EDAAVAKQ +N Q+I
Sbjct: 87 VKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQELNHQVI 127