BLASTX nr result

ID: Zingiber24_contig00023631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00023631
         (619 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004975096.1| PREDICTED: uncharacterized protein LOC101758...    57   4e-06
ref|XP_002451994.1| hypothetical protein SORBIDRAFT_04g012950 [S...    57   4e-06

>ref|XP_004975096.1| PREDICTED: uncharacterized protein LOC101758026 [Setaria italica]
          Length = 239

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -3

Query: 188 GNKRKKKLTKQLSMQETTREARWEKRRRQILEKRQRL 78
           GN  KKKLTKQLSM+ETTRE +WEKRRRQI  +R  +
Sbjct: 51  GNTNKKKLTKQLSMKETTREVKWEKRRRQIQRQRSSM 87


>ref|XP_002451994.1| hypothetical protein SORBIDRAFT_04g012950 [Sorghum bicolor]
           gi|241931825|gb|EES04970.1| hypothetical protein
           SORBIDRAFT_04g012950 [Sorghum bicolor]
          Length = 262

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = -3

Query: 296 REAEEGKEAAEFPDERSLMRQPSGAIGDGATDGSEG-GNKRKKKLTKQLSMQETTREARW 120
           R+ E+ ++ A+  +    M+ P         + + G GN R++ L+KQLSM+ETTREA+W
Sbjct: 32  RDREKEEDEAQQDEVAEAMKAPLLGWNHNHHEAAGGIGNNRRRLLSKQLSMKETTREAKW 91

Query: 119 EKRRRQILEK 90
           EKRRRQIL +
Sbjct: 92  EKRRRQILRR 101


Top