BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00023557
         (1604 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002451657.1| hypothetical protein SORBIDRAFT_04g005370 [S...   469   e-129
ref|NP_001148810.1| LOC100282427 [Zea mays] gi|195622286|gb|ACG3...   464   e-128
gb|EOY27440.1| Rad23 UV excision repair protein family isoform 1...   461   e-127
ref|XP_006646969.1| PREDICTED: ubiquitin receptor RAD23b-like is...   460   e-127
ref|XP_006646967.1| PREDICTED: ubiquitin receptor RAD23b-like is...   460   e-127
gb|AFW66280.1| hypothetical protein ZEAMMB73_839350 [Zea mays]        459   e-126
ref|XP_006646968.1| PREDICTED: ubiquitin receptor RAD23b-like is...   456   e-125
ref|XP_006646966.1| PREDICTED: ubiquitin receptor RAD23b-like is...   455   e-125
ref|XP_006493449.1| PREDICTED: ubiquitin receptor RAD23b-like [C...   453   e-125
ref|XP_004303217.1| PREDICTED: putative DNA repair protein RAD23...   453   e-124
gb|EMJ16752.1| hypothetical protein PRUPE_ppa007284mg [Prunus pe...   452   e-124
ref|NP_001046083.1| Os02g0179300 [Oryza sativa Japonica Group] g...   452   e-124
gb|EEC72612.1| hypothetical protein OsI_06092 [Oryza sativa Indi...   452   e-124
dbj|BAK04690.1| predicted protein [Hordeum vulgare subsp. vulgare]    447   e-123
ref|XP_002512770.1| uv excision repair protein rad23, putative [...   446   e-122
ref|XP_003570619.1| PREDICTED: putative DNA repair protein RAD23...   443   e-122
ref|XP_002303970.1| DNA repair protein RAD23 [Populus trichocarp...   441   e-121
ref|XP_004235877.1| PREDICTED: putative DNA repair protein RAD23...   440   e-121
ref|XP_006341431.1| PREDICTED: ubiquitin receptor RAD23b-like [S...   439   e-120
ref|XP_006845449.1| hypothetical protein AMTR_s00019p00116110 [A...   439   e-120

>ref|XP_002451657.1| hypothetical protein SORBIDRAFT_04g005370 [Sorghum bicolor]
            gi|241931488|gb|EES04633.1| hypothetical protein
            SORBIDRAFT_04g005370 [Sorghum bicolor]
          Length = 369

 Score =  469 bits (1208), Expect = e-129
 Identities = 245/377 (64%), Positives = 283/377 (75%), Gaps = 11/377 (2%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKGTHFEIRVQPNDTI+AVKKNIE++QGKD+YPWGQQLLI NGKVLKDE+TL+
Sbjct: 1    MKLTVKTLKGTHFEIRVQPNDTIMAVKKNIEEIQGKDSYPWGQQLLIFNGKVLKDESTLD 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQAP--------SQV 451
            ENKV EDGFLVVML              QPS T   +     DAP QAP        +  
Sbjct: 61   ENKVNEDGFLVVMLSKGKTSGSSGTSSSQPSNTPAARQAPPLDAPQQAPQPPVAPTTTSQ 120

Query: 452  PSEVPAQ-PILSDAQAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERA 628
            P  +PAQ P  +   AAS+L+ GSN++  I+QL+EMGGG+WDRD + RALRAAYNNPERA
Sbjct: 121  PEGLPAQAPPNTYDNAASSLLSGSNVDTMINQLMEMGGGSWDRDKVQRALRAAYNNPERA 180

Query: 629  VEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGP--LFGVPNSSPLNMFPQXX 802
            VEYLYSGIP+TAE+A+P        +  QGA+T D A  G   L G+PN++PLN+FPQ  
Sbjct: 181  VEYLYSGIPVTAEVAVP--------IGGQGANTTDRAPTGEAGLSGIPNTAPLNLFPQGG 232

Query: 803  XXXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEF 982
                       LDFLRNNQQF   R MVH NPQILQPML ELSKQNPQ+LRLI+E+H+EF
Sbjct: 233  SNAGGGAGGGPLDFLRNNQQFQAVREMVHTNPQILQPMLVELSKQNPQILRLIEENHDEF 292

Query: 983  LQLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDR 1162
            LQL+NEP EG EGD  DQP++DEMPH ISVTPEEQ A+ RLE++GFDRARVIEAF+ACDR
Sbjct: 293  LQLLNEPFEGGEGDFLDQPEEDEMPHAISVTPEEQDAIGRLESMGFDRARVIEAFIACDR 352

Query: 1163 NEELAANYLLEHYGEED 1213
            NEELAANYLLEH GEED
Sbjct: 353  NEELAANYLLEHAGEED 369


>ref|NP_001148810.1| LOC100282427 [Zea mays] gi|195622286|gb|ACG32973.1| DNA repair
            protein RAD23-1 [Zea mays] gi|238014028|gb|ACR38049.1|
            unknown [Zea mays] gi|413926349|gb|AFW66281.1| DNA repair
            protein RAD23-1 isoform 1 [Zea mays]
            gi|413926350|gb|AFW66282.1| DNA repair protein RAD23-1
            isoform 2 [Zea mays] gi|413926351|gb|AFW66283.1| DNA
            repair protein RAD23-1 isoform 3 [Zea mays]
          Length = 368

 Score =  464 bits (1194), Expect = e-128
 Identities = 242/376 (64%), Positives = 279/376 (74%), Gaps = 10/376 (2%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKGTHFEIRVQPNDTI+AVKKNIE++QGKD+YPWGQQLLI NGKVLKDE+TLE
Sbjct: 1    MKLTVKTLKGTHFEIRVQPNDTIMAVKKNIEEIQGKDSYPWGQQLLIFNGKVLKDESTLE 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQAP--------SQV 451
            ENKV EDGFLVVML              Q S T   +     +AP QAP        +  
Sbjct: 61   ENKVNEDGFLVVMLSKGKTSGSTGTSSSQHSNTPATRQAPPLEAPQQAPQPPVAPITTSQ 120

Query: 452  PSEVPAQPILSDAQAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERAV 631
            P  +PAQ   +   AASNL+ G N++  I+QL+EMGGG+WD+D + RALRAAYNNPERAV
Sbjct: 121  PEGLPAQAPNTHDNAASNLLSGRNVDTIINQLMEMGGGSWDKDKVQRALRAAYNNPERAV 180

Query: 632  EYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGP--LFGVPNSSPLNMFPQXXX 805
            EYLYSGIP+TAEIA+P        +  QGA+T D A  G   L G+PN++PL++FPQ   
Sbjct: 181  EYLYSGIPVTAEIAVP--------IGGQGANTTDRAPTGEAGLSGIPNTAPLDLFPQGAS 232

Query: 806  XXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEFL 985
                      LDFLRNN QF   R MVH NPQILQPML ELSKQNPQ+LRLI+E+H+EFL
Sbjct: 233  NAGGGAGGGPLDFLRNNPQFQAVREMVHTNPQILQPMLVELSKQNPQILRLIEENHDEFL 292

Query: 986  QLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDRN 1165
            QL+NEP EG EGD  DQP++DEMPH ISVTPEEQ A+ RLE++GFDRARVIEAFLACDRN
Sbjct: 293  QLLNEPFEGGEGDFLDQPEEDEMPHAISVTPEEQEAIGRLESMGFDRARVIEAFLACDRN 352

Query: 1166 EELAANYLLEHYGEED 1213
            EELAANYLLEH GEED
Sbjct: 353  EELAANYLLEHAGEED 368


>gb|EOY27440.1| Rad23 UV excision repair protein family isoform 1 [Theobroma cacao]
          Length = 373

 Score =  461 bits (1187), Expect = e-127
 Identities = 247/376 (65%), Positives = 282/376 (75%), Gaps = 12/376 (3%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKG+HFEIRVQPNDT++AVKKNIE  QGKDNYP GQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQP-SATSVVQHPALKDAPS-QAPSQVPSE--- 460
            +NKV EDGFLVVML              QP S+T  V  PA   AP+ +AP+Q P+    
Sbjct: 61   DNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASSTPSVTPPASNPAPAPEAPAQAPTSKGT 120

Query: 461  ------VPAQPILSD-AQAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNP 619
                    A P     +QAASNLV G+N+EQTI QL++MGGGNWD++T+ RALRAAYNNP
Sbjct: 121  TSASDTATANPNTDTYSQAASNLVAGNNLEQTIQQLMDMGGGNWDKETVTRALRAAYNNP 180

Query: 620  ERAVEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGPLFGVPNSSPLNMFPQX 799
            ERAV+YLYSGIP +AE+A+P   FP+S  +  GA     A A P+ G PNSSPLNMFPQ 
Sbjct: 181  ERAVDYLYSGIPESAEVAVPVGRFPTSQTTETGA-----APAAPVSGAPNSSPLNMFPQE 235

Query: 800  XXXXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEE 979
                        LDFLRNNQQF   R+MV +NPQILQPMLQEL KQNPQLLRLIQEHH E
Sbjct: 236  TLSGAGAGGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHHAE 295

Query: 980  FLQLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACD 1159
            FLQL+NEP+EG EGD+FDQ +QD MPH I+VTP EQ A+ERLEA+GFDRA VIEAFLACD
Sbjct: 296  FLQLINEPLEGSEGDIFDQAEQD-MPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACD 354

Query: 1160 RNEELAANYLLEHYGE 1207
            RNEELAANYLLE+ G+
Sbjct: 355  RNEELAANYLLENAGD 370


>ref|XP_006646969.1| PREDICTED: ubiquitin receptor RAD23b-like isoform X2 [Oryza
            brachyantha]
          Length = 369

 Score =  460 bits (1184), Expect = e-127
 Identities = 240/377 (63%), Positives = 278/377 (73%), Gaps = 11/377 (2%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKGT+FEIRVQP+DTI+AVKKNIE +QGKD+YPWGQQLLIHNGKVLKDE+TLE
Sbjct: 1    MKLTVKTLKGTNFEIRVQPHDTIMAVKKNIEDIQGKDSYPWGQQLLIHNGKVLKDESTLE 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQAPSQV--PSEVPA 469
            ENKV ED FLVVML                S+T   +     DAP QAP  +  PS  P 
Sbjct: 61   ENKVSEDNFLVVMLSKSKASGSSGALTALASSTPSTRQAPPPDAPQQAPQPLAAPSTTPQ 120

Query: 470  -------QPILSDAQAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERA 628
                    P  +  QAASNL+ GSN++ TI+QL+EMGGG+WDRD + RALRAAYNNPERA
Sbjct: 121  LERPPADDPSNAYGQAASNLLSGSNLDTTINQLMEMGGGSWDRDKVQRALRAAYNNPERA 180

Query: 629  VEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAA--GPLFGVPNSSPLNMFPQXX 802
            VEYLYSGIPITAE+A+P D         QGA+T + ++     L G+PN+SPLN+FPQ  
Sbjct: 181  VEYLYSGIPITAEVAVPAD--------GQGANTTEPSSTREASLSGIPNTSPLNLFPQGG 232

Query: 803  XXXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEF 982
                       L+FLR+NQQF   R MVH NPQILQPMLQELSKQNPQLLRLIQE+H+EF
Sbjct: 233  PNDGGGAGGGTLEFLRHNQQFQALREMVHTNPQILQPMLQELSKQNPQLLRLIQENHDEF 292

Query: 983  LQLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDR 1162
            LQL+NEP +G +GD  DQPDQDEMPH I+VTPEEQ A+ RLEA+GFDRARV EAF ACDR
Sbjct: 293  LQLINEPFDGADGDFLDQPDQDEMPHAINVTPEEQEAIGRLEAMGFDRARVFEAFFACDR 352

Query: 1163 NEELAANYLLEHYGEED 1213
            NE+LA NYLLEH  +ED
Sbjct: 353  NEQLAVNYLLEHAADED 369


>ref|XP_006646967.1| PREDICTED: ubiquitin receptor RAD23b-like isoform X2 [Oryza
            brachyantha]
          Length = 370

 Score =  460 bits (1183), Expect = e-127
 Identities = 239/378 (63%), Positives = 278/378 (73%), Gaps = 12/378 (3%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKGTHFEIRVQP+DTI+AVKKNIE++QGKD+YPWGQQLLIHNGKVLKDE+TLE
Sbjct: 1    MKLTVKTLKGTHFEIRVQPHDTIMAVKKNIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQA--PSQVPSEVPA 469
            ENKV EDGFLVVML                S+T   +     DAP QA  P   PS  P 
Sbjct: 61   ENKVSEDGFLVVMLSKSKASGSSGALTALASSTPSTRQAPPPDAPQQATQPPAAPSTTPQ 120

Query: 470  -------QPILSDAQAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERA 628
                    P  +  QAASNL+ GS+++ TI+QL+EMGGG+WDRD + RALRA YNNPERA
Sbjct: 121  LERPPADDPSNAYGQAASNLLSGSSLDTTINQLMEMGGGSWDRDKVKRALRAPYNNPERA 180

Query: 629  VEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAA---GPLFGVPNSSPLNMFPQX 799
            VEYLYSGIP+TAE+A+P           QGA+T + ++      L G+PN+SPLN+FPQ 
Sbjct: 181  VEYLYSGIPVTAEVAVPA--------GGQGANTTEPSSTTREASLSGIPNTSPLNLFPQG 232

Query: 800  XXXXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEE 979
                        L+FLR+NQQF   R MVH NPQILQPMLQELSKQNPQLLRLIQE+H+E
Sbjct: 233  GPNDGGGAGGGTLEFLRHNQQFQALREMVHTNPQILQPMLQELSKQNPQLLRLIQENHDE 292

Query: 980  FLQLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACD 1159
            FLQL+NEP +G +GD  DQPDQDEMPH I+VTPEEQ A+ RLEA+GFDRARVIEAF ACD
Sbjct: 293  FLQLINEPFDGADGDFLDQPDQDEMPHAINVTPEEQEAIGRLEAMGFDRARVIEAFFACD 352

Query: 1160 RNEELAANYLLEHYGEED 1213
            RNE+LA NYLLEH  +ED
Sbjct: 353  RNEQLAVNYLLEHAADED 370


>gb|AFW66280.1| hypothetical protein ZEAMMB73_839350 [Zea mays]
          Length = 369

 Score =  459 bits (1182), Expect = e-126
 Identities = 242/377 (64%), Positives = 279/377 (74%), Gaps = 11/377 (2%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKGTHFEIRVQPNDTI+AVKKNIE++QGKD+YPWGQQLLI NGKVLKDE+TLE
Sbjct: 1    MKLTVKTLKGTHFEIRVQPNDTIMAVKKNIEEIQGKDSYPWGQQLLIFNGKVLKDESTLE 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQAP--------SQV 451
            ENKV EDGFLVVML              Q S T   +     +AP QAP        +  
Sbjct: 61   ENKVNEDGFLVVMLSKGKTSGSTGTSSSQHSNTPATRQAPPLEAPQQAPQPPVAPITTSQ 120

Query: 452  PSEVPAQPILSDAQAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERAV 631
            P  +PAQ   +   AASNL+ G N++  I+QL+EMGGG+WD+D + RALRAAYNNPERAV
Sbjct: 121  PEGLPAQAPNTHDNAASNLLSGRNVDTIINQLMEMGGGSWDKDKVQRALRAAYNNPERAV 180

Query: 632  EYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGP--LFGVPNSSPLNMFPQXXX 805
            EYLYSGIP+TAEIA+P        +  QGA+T D A  G   L G+PN++PL++FPQ   
Sbjct: 181  EYLYSGIPVTAEIAVP--------IGGQGANTTDRAPTGEAGLSGIPNTAPLDLFPQQGA 232

Query: 806  XXXXXXXXXX-LDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEF 982
                       LDFLRNN QF   R MVH NPQILQPML ELSKQNPQ+LRLI+E+H+EF
Sbjct: 233  SNAGGGAGGGPLDFLRNNPQFQAVREMVHTNPQILQPMLVELSKQNPQILRLIEENHDEF 292

Query: 983  LQLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDR 1162
            LQL+NEP EG EGD  DQP++DEMPH ISVTPEEQ A+ RLE++GFDRARVIEAFLACDR
Sbjct: 293  LQLLNEPFEGGEGDFLDQPEEDEMPHAISVTPEEQEAIGRLESMGFDRARVIEAFLACDR 352

Query: 1163 NEELAANYLLEHYGEED 1213
            NEELAANYLLEH GEED
Sbjct: 353  NEELAANYLLEHAGEED 369


>ref|XP_006646968.1| PREDICTED: ubiquitin receptor RAD23b-like isoform X1 [Oryza
            brachyantha]
          Length = 370

 Score =  456 bits (1172), Expect = e-125
 Identities = 240/378 (63%), Positives = 278/378 (73%), Gaps = 12/378 (3%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKGT+FEIRVQP+DTI+AVKKNIE +QGKD+YPWGQQLLIHNGKVLKDE+TLE
Sbjct: 1    MKLTVKTLKGTNFEIRVQPHDTIMAVKKNIEDIQGKDSYPWGQQLLIHNGKVLKDESTLE 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQAPSQV--PSEVPA 469
            ENKV ED FLVVML                S+T   +     DAP QAP  +  PS  P 
Sbjct: 61   ENKVSEDNFLVVMLSKSKASGSSGALTALASSTPSTRQAPPPDAPQQAPQPLAAPSTTPQ 120

Query: 470  -------QPILSDAQAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERA 628
                    P  +  QAASNL+ GSN++ TI+QL+EMGGG+WDRD + RALRAAYNNPERA
Sbjct: 121  LERPPADDPSNAYGQAASNLLSGSNLDTTINQLMEMGGGSWDRDKVQRALRAAYNNPERA 180

Query: 629  VEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAA--GPLFGVPNSSPLNMFPQXX 802
            VEYLYSGIPITAE+A+P D         QGA+T + ++     L G+PN+SPLN+FPQ  
Sbjct: 181  VEYLYSGIPITAEVAVPAD--------GQGANTTEPSSTREASLSGIPNTSPLNLFPQQG 232

Query: 803  XXXXXXXXXXX-LDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEE 979
                        L+FLR+NQQF   R MVH NPQILQPMLQELSKQNPQLLRLIQE+H+E
Sbjct: 233  GPNDGGGAGGGTLEFLRHNQQFQALREMVHTNPQILQPMLQELSKQNPQLLRLIQENHDE 292

Query: 980  FLQLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACD 1159
            FLQL+NEP +G +GD  DQPDQDEMPH I+VTPEEQ A+ RLEA+GFDRARV EAF ACD
Sbjct: 293  FLQLINEPFDGADGDFLDQPDQDEMPHAINVTPEEQEAIGRLEAMGFDRARVFEAFFACD 352

Query: 1160 RNEELAANYLLEHYGEED 1213
            RNE+LA NYLLEH  +ED
Sbjct: 353  RNEQLAVNYLLEHAADED 370


>ref|XP_006646966.1| PREDICTED: ubiquitin receptor RAD23b-like isoform X1 [Oryza
            brachyantha]
          Length = 371

 Score =  455 bits (1171), Expect = e-125
 Identities = 239/379 (63%), Positives = 278/379 (73%), Gaps = 13/379 (3%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKGTHFEIRVQP+DTI+AVKKNIE++QGKD+YPWGQQLLIHNGKVLKDE+TLE
Sbjct: 1    MKLTVKTLKGTHFEIRVQPHDTIMAVKKNIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQA--PSQVPSEVPA 469
            ENKV EDGFLVVML                S+T   +     DAP QA  P   PS  P 
Sbjct: 61   ENKVSEDGFLVVMLSKSKASGSSGALTALASSTPSTRQAPPPDAPQQATQPPAAPSTTPQ 120

Query: 470  -------QPILSDAQAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERA 628
                    P  +  QAASNL+ GS+++ TI+QL+EMGGG+WDRD + RALRA YNNPERA
Sbjct: 121  LERPPADDPSNAYGQAASNLLSGSSLDTTINQLMEMGGGSWDRDKVKRALRAPYNNPERA 180

Query: 629  VEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAA---GPLFGVPNSSPLNMFPQX 799
            VEYLYSGIP+TAE+A+P           QGA+T + ++      L G+PN+SPLN+FPQ 
Sbjct: 181  VEYLYSGIPVTAEVAVPA--------GGQGANTTEPSSTTREASLSGIPNTSPLNLFPQQ 232

Query: 800  XXXXXXXXXXXX-LDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHE 976
                         L+FLR+NQQF   R MVH NPQILQPMLQELSKQNPQLLRLIQE+H+
Sbjct: 233  GGPNDGGGAGGGTLEFLRHNQQFQALREMVHTNPQILQPMLQELSKQNPQLLRLIQENHD 292

Query: 977  EFLQLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLAC 1156
            EFLQL+NEP +G +GD  DQPDQDEMPH I+VTPEEQ A+ RLEA+GFDRARVIEAF AC
Sbjct: 293  EFLQLINEPFDGADGDFLDQPDQDEMPHAINVTPEEQEAIGRLEAMGFDRARVIEAFFAC 352

Query: 1157 DRNEELAANYLLEHYGEED 1213
            DRNE+LA NYLLEH  +ED
Sbjct: 353  DRNEQLAVNYLLEHAADED 371


>ref|XP_006493449.1| PREDICTED: ubiquitin receptor RAD23b-like [Citrus sinensis]
          Length = 377

 Score =  453 bits (1166), Expect = e-125
 Identities = 240/380 (63%), Positives = 280/380 (73%), Gaps = 16/380 (4%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKG+HFEIRVQP+DT++AVKKNIE VQGKDNYP GQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSV-VQHPALKDAPSQAPSQVPS----E 460
            +NKV EDGFLVVML              QP+ T+     P+    P Q  S  P      
Sbjct: 61   DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTTAPSSNSTPPQEASVPPPAPTPS 120

Query: 461  VPAQPILSDA-----------QAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAA 607
            +PA  + S+            QAASNLV G+++EQTI Q+++MGGG WD++T+ RAL+AA
Sbjct: 121  IPASNVTSNVTAANANSDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAA 180

Query: 608  YNNPERAVEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGPLFGVPNSSPLNM 787
            YNNPERAV+YLYSGIP TAE+A+P  HFP+S  +  GA     A A P+ GVPNSSPLNM
Sbjct: 181  YNNPERAVDYLYSGIPETAEVAVPVAHFPASQAAETGA-----AGAAPVSGVPNSSPLNM 235

Query: 788  FPQXXXXXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQE 967
            FPQ             LDFLRNNQQF   R+MV +NPQILQPMLQEL KQNPQLLRLIQE
Sbjct: 236  FPQETLSGAPASGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQE 295

Query: 968  HHEEFLQLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAF 1147
            H  EFLQL+NEP++G EGD+FDQP+QD MPH I+VTP EQ A++RLEA+GFDRA VIEAF
Sbjct: 296  HQAEFLQLINEPVDGSEGDMFDQPEQD-MPHAINVTPAEQEAIQRLEAMGFDRALVIEAF 354

Query: 1148 LACDRNEELAANYLLEHYGE 1207
            LACDRNEELAANYLLE+ G+
Sbjct: 355  LACDRNEELAANYLLENAGD 374


>ref|XP_004303217.1| PREDICTED: putative DNA repair protein RAD23-1-like [Fragaria vesca
            subsp. vesca]
          Length = 371

 Score =  453 bits (1165), Expect = e-124
 Identities = 238/374 (63%), Positives = 274/374 (73%), Gaps = 10/374 (2%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKG+HFEIRVQP DT++AVKKNIE +QGKDNYP GQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPS--QAPSQVPSEVPA 469
            +NKV EDGFLVVML              QP++T       +  + +  +AP Q P     
Sbjct: 61   DNKVTEDGFLVVMLSKSKTSGLAGASSAQPASTIPPTTAPITTSTTRAEAPIQTPPSEST 120

Query: 470  QPILSDA--------QAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPER 625
             P    A        QAASNLV G+N+++TI Q+++MGGGNWDR+T+ RALRAAYNNPER
Sbjct: 121  TPASDTADVHTDTYGQAASNLVAGTNLDETIQQIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 626  AVEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGPLFGVPNSSPLNMFPQXXX 805
            AV+YLYS IP TAE+A+P  HFP S  +  G     +  A P+ G PNS+PLNMFPQ   
Sbjct: 181  AVDYLYSSIPETAEVAVPVAHFPGSQATETG-----ITNAPPVSGAPNSAPLNMFPQEAL 235

Query: 806  XXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEFL 985
                      LDFLRNN QF   R+MV ANPQILQPMLQEL KQNPQLLRLIQEHH EFL
Sbjct: 236  SGAGAGALGSLDFLRNNHQFQTLRSMVQANPQILQPMLQELGKQNPQLLRLIQEHHAEFL 295

Query: 986  QLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDRN 1165
            QL+NEP+EG EGD+FDQPDQ EMPH I+VTP EQ A+ERLEA+GFDRA VIEAFLACDRN
Sbjct: 296  QLINEPLEGSEGDMFDQPDQ-EMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRN 354

Query: 1166 EELAANYLLEHYGE 1207
            EELAANYLLE+ G+
Sbjct: 355  EELAANYLLENAGD 368


>gb|EMJ16752.1| hypothetical protein PRUPE_ppa007284mg [Prunus persica]
          Length = 374

 Score =  452 bits (1164), Expect = e-124
 Identities = 240/379 (63%), Positives = 280/379 (73%), Gaps = 15/379 (3%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKG+HFEIRVQP DT++AVKKNIE VQGKDNYP GQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPS--QAPSQVPSEVPA 469
            +NKV EDGFLVVML              QP++T+    P   ++ +  +AP+Q P   P 
Sbjct: 61   DNKVTEDGFLVVMLSKSKTSGLAGASSTQPTSTNPPPTPPTTNSTTRPEAPAQPP---PV 117

Query: 470  QPILSDA-----------QAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNN 616
            Q  +S +           QAAS L+ G+N+EQTI Q+++MGGGNWDR+T+ RALRAAYNN
Sbjct: 118  QSTISASDSANVHTDTYGQAASTLLAGTNLEQTIQQIMDMGGGNWDRETVTRALRAAYNN 177

Query: 617  PERAVEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGPLFGVPNSSPLNMFPQ 796
            PERAV+YLYS IP TAE+A+P  HFP+S  +  GA     A A P+ G PNS+PLNMFPQ
Sbjct: 178  PERAVDYLYSSIPETAEVAVPVGHFPASQATETGA-----ANAAPVSGAPNSAPLNMFPQ 232

Query: 797  XXXXXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHE 976
                         L FLRNN+QF   R+MV ANPQILQPMLQEL KQNPQLLRLIQEHH 
Sbjct: 233  ETLSGAGAGALGSLAFLRNNRQFQALRSMVQANPQILQPMLQELGKQNPQLLRLIQEHHT 292

Query: 977  EFLQLMNEPIEGLEGDLFDQPD--QDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFL 1150
            EFLQL+NEP+EG EGD+FDQPD    +MPH I+VTP EQ A+ERLEA+GFDRA VIEAFL
Sbjct: 293  EFLQLINEPLEGSEGDIFDQPDGPDQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFL 352

Query: 1151 ACDRNEELAANYLLEHYGE 1207
            ACDRNEELAANYLLE+ G+
Sbjct: 353  ACDRNEELAANYLLENAGD 371


>ref|NP_001046083.1| Os02g0179300 [Oryza sativa Japonica Group]
            gi|50252077|dbj|BAD28007.1| putative RAD23 protein [Oryza
            sativa Japonica Group] gi|113535614|dbj|BAF07997.1|
            Os02g0179300 [Oryza sativa Japonica Group]
            gi|222622305|gb|EEE56437.1| hypothetical protein
            OsJ_05616 [Oryza sativa Japonica Group]
          Length = 369

 Score =  452 bits (1164), Expect = e-124
 Identities = 237/377 (62%), Positives = 278/377 (73%), Gaps = 11/377 (2%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKGT FEIRVQPNDTI+AVKK IE++QGKD+YPWGQQLLIHNGKVLKDE+TLE
Sbjct: 1    MKLTVKTLKGTQFEIRVQPNDTIMAVKKIIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQAPSQV-------- 451
            ENKV E GFLVVML                S+T + +     DA   AP  +        
Sbjct: 61   ENKVSEVGFLVVMLSKSKASGSSGALSSLTSSTPLTRQETPADASRAAPQPLVAPTRTPQ 120

Query: 452  PSEVPAQ-PILSDAQAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERA 628
            P   PA+ P  +  QAASNL+ GSN++ TI+QL+EMGGG+WDRD + RALRAAYNNPERA
Sbjct: 121  PERPPAEAPSNAYGQAASNLLSGSNLDTTINQLMEMGGGSWDRDKVQRALRAAYNNPERA 180

Query: 629  VEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAA--GPLFGVPNSSPLNMFPQXX 802
            VEYLYSGIPITAE+A+P           QGA+T + ++     L G+PN+SPLN+FPQ  
Sbjct: 181  VEYLYSGIPITAEVAVPA--------GGQGANTTEPSSTREASLSGIPNASPLNLFPQGD 232

Query: 803  XXXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEF 982
                       L+FLR+NQQF   R MVH NPQILQPMLQELSK+NPQLLRLIQE+H+EF
Sbjct: 233  ANDGGGAGGGTLEFLRHNQQFQALREMVHTNPQILQPMLQELSKKNPQLLRLIQENHDEF 292

Query: 983  LQLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDR 1162
            LQL+NEP +G +GD  DQPDQDEMPH+I+VTPEEQ A+ RLE +GFDRARVIEAF ACDR
Sbjct: 293  LQLINEPFDGADGDFLDQPDQDEMPHSINVTPEEQEAIGRLEGMGFDRARVIEAFFACDR 352

Query: 1163 NEELAANYLLEHYGEED 1213
            NE+LAANYLLEH  +ED
Sbjct: 353  NEQLAANYLLEHAADED 369


>gb|EEC72612.1| hypothetical protein OsI_06092 [Oryza sativa Indica Group]
          Length = 369

 Score =  452 bits (1164), Expect = e-124
 Identities = 237/377 (62%), Positives = 278/377 (73%), Gaps = 11/377 (2%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKGT FEIRVQPNDTI+AVKK IE++QGKD+YPWGQQLLIHNGKVLKDE+TLE
Sbjct: 1    MKLTVKTLKGTQFEIRVQPNDTIMAVKKIIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQAPSQV-------- 451
            ENKV E GFLVVML                S+T + +     DA   AP  +        
Sbjct: 61   ENKVSEVGFLVVMLSKSKASGSSGALSSLTSSTPLTRQETPADASRAAPQPLVAPTRTPQ 120

Query: 452  PSEVPAQ-PILSDAQAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERA 628
            P   PA+ P  +  QAASNL+ GSN++ TI+QL+EMGGG+WDRD + RALRAAYNNPERA
Sbjct: 121  PERPPAEAPSNAYGQAASNLLSGSNLDTTINQLMEMGGGSWDRDKVQRALRAAYNNPERA 180

Query: 629  VEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAA--GPLFGVPNSSPLNMFPQXX 802
            VEYLYSGIPITAE+A+P           QGA+T + ++     L G+PN+SPLN+FPQ  
Sbjct: 181  VEYLYSGIPITAEVAVPA--------GGQGANTTEPSSTREASLSGIPNASPLNLFPQGD 232

Query: 803  XXXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEF 982
                       L+FLR+NQQF   R MVH NPQILQPMLQELSK+NPQLLRLIQE+H+EF
Sbjct: 233  ANDGDGAGGGTLEFLRHNQQFQALREMVHTNPQILQPMLQELSKKNPQLLRLIQENHDEF 292

Query: 983  LQLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDR 1162
            LQL+NEP +G +GD  DQPDQDEMPH+I+VTPEEQ A+ RLE +GFDRARVIEAF ACDR
Sbjct: 293  LQLINEPFDGADGDFLDQPDQDEMPHSINVTPEEQEAIGRLEGMGFDRARVIEAFFACDR 352

Query: 1163 NEELAANYLLEHYGEED 1213
            NE+LAANYLLEH  +ED
Sbjct: 353  NEQLAANYLLEHAADED 369


>dbj|BAK04690.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 367

 Score =  447 bits (1151), Expect = e-123
 Identities = 236/376 (62%), Positives = 277/376 (73%), Gaps = 10/376 (2%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKGTHFEIRVQ NDTI+AVKKNIE++QGKD+YPWGQQLLIHNGKVLKDE+TL+
Sbjct: 1    MKLTVKTLKGTHFEIRVQHNDTIMAVKKNIEEIQGKDSYPWGQQLLIHNGKVLKDESTLD 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQAPSQVPSEVPAQP 475
            EN+V E GFLVVML              QPS+T V         P     QVPS   +QP
Sbjct: 61   ENQVGEAGFLVVMLSKSKASASSGGSSAQPSSTPVTSQAPPVAQPQAPQPQVPSTTTSQP 120

Query: 476  ILSDAQ--------AASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERAV 631
                A+        AAS+L+ GSN++  I+Q++EMGGG+WDRD + RALRAAYNNPERA+
Sbjct: 121  ERPPAETPLSTVDIAASDLLSGSNLDTMINQIMEMGGGSWDRDKVQRALRAAYNNPERAI 180

Query: 632  EYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGP--LFGVPNSSPLNMFPQXXX 805
            +YLYSGIP+TAE+A+P        V  QGA+T   AA G   L G+PN++PL++FPQ   
Sbjct: 181  DYLYSGIPVTAEVAVP--------VVGQGANTT-AAAPGETGLSGIPNTAPLDLFPQGAS 231

Query: 806  XXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEFL 985
                      LDFLRNNQQF   R MVH NPQILQPMLQELSKQNPQLLRLIQE+++EFL
Sbjct: 232  HAGGAAGGGSLDFLRNNQQFQALREMVHTNPQILQPMLQELSKQNPQLLRLIQENNDEFL 291

Query: 986  QLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDRN 1165
            QL+NE  EG +GD  DQ DQDEMPH ISVTPEEQ A+ RLEA+GF+RARVIEAF ACDRN
Sbjct: 292  QLLNETFEGGDGDFLDQADQDEMPHAISVTPEEQEAIGRLEAMGFERARVIEAFFACDRN 351

Query: 1166 EELAANYLLEHYGEED 1213
            E+LAANYLLEH G+E+
Sbjct: 352  EQLAANYLLEHAGDEE 367


>ref|XP_002512770.1| uv excision repair protein rad23, putative [Ricinus communis]
            gi|223547781|gb|EEF49273.1| uv excision repair protein
            rad23, putative [Ricinus communis]
          Length = 359

 Score =  446 bits (1146), Expect = e-122
 Identities = 243/371 (65%), Positives = 274/371 (73%), Gaps = 7/371 (1%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKG+HFEIRVQPNDT++AVKKNIE VQGKDNYP GQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQAPS--QVPSEVPA 469
            +NKV EDGFLVVML                S TS  Q PA    P+ APS    P+    
Sbjct: 61   DNKVTEDGFLVVMLSKSKTSG--------SSGTSSTQ-PAAATPPTTAPSSNSTPAVEVQ 111

Query: 470  QPILSD--AQAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERAVEYLY 643
             P  +D   +AASNLV G N+EQTI Q+++MGGG WD++T+ RALRAAYNNPERAV+YLY
Sbjct: 112  PPTQTDTYGEAASNLVAGDNLEQTIQQIMDMGGGTWDKETVTRALRAAYNNPERAVDYLY 171

Query: 644  SGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGPLFGVPNSSPLNMFPQ---XXXXXX 814
            SGIP TAE+A+P  H P+   +  GA     A A PL GVPNSSPLNMFPQ         
Sbjct: 172  SGIPETAEVAVPVAHLPAGQATETGA-----APAAPLSGVPNSSPLNMFPQEALSAAGGG 226

Query: 815  XXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEFLQLM 994
                   LDFLRNN QF   R+MV ANPQILQPMLQEL KQNPQLLR+IQEHH EFLQL+
Sbjct: 227  SAGGLGSLDFLRNNAQFQTLRSMVQANPQILQPMLQELGKQNPQLLRMIQEHHAEFLQLL 286

Query: 995  NEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDRNEEL 1174
            NEP+EG EGD+FDQ +QD MPH I+VTP EQAA+ERL A+GFDRA VIEAFLACDRNE L
Sbjct: 287  NEPLEGSEGDIFDQGEQD-MPHAINVTPAEQAAIERLVAMGFDRALVIEAFLACDRNEVL 345

Query: 1175 AANYLLEHYGE 1207
            AANYLLE+ G+
Sbjct: 346  AANYLLENGGD 356


>ref|XP_003570619.1| PREDICTED: putative DNA repair protein RAD23-1-like [Brachypodium
            distachyon]
          Length = 368

 Score =  443 bits (1140), Expect = e-122
 Identities = 235/377 (62%), Positives = 276/377 (73%), Gaps = 11/377 (2%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKGTHFEIRVQ NDTI+AVKKNIE++QGKDNYPWGQQLLIH GK+LKDE+TLE
Sbjct: 1    MKLTVKTLKGTHFEIRVQQNDTIMAVKKNIEEIQGKDNYPWGQQLLIHTGKILKDESTLE 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQAP-SQVPSEVPAQ 472
            EN+V EDG LVVML              QPS+  V +  A  DA  QA  S VP    +Q
Sbjct: 61   ENQVSEDGSLVVMLSKSKASVSSGASSAQPSSIPVTRQ-APPDAQIQAAESSVPPTTTSQ 119

Query: 473  PILSDAQA--------ASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERA 628
            P    A+         AS+L+ GSN++  I+Q++EMGGG+WDRD + RALRAAYNNPERA
Sbjct: 120  PERPPAETPLNTVDHVASDLLSGSNLDTMINQIMEMGGGSWDRDKVQRALRAAYNNPERA 179

Query: 629  VEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGP--LFGVPNSSPLNMFPQXX 802
            V+YLYSGIP+TAE+A+P        V  QGA++ D A  G   L G+PN++PLN+FPQ  
Sbjct: 180  VDYLYSGIPVTAEVAVP--------VGPQGANSTDAAPPGVTGLSGIPNTAPLNLFPQGA 231

Query: 803  XXXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEF 982
                       LDFLRNNQQF   R MVH NPQILQPMLQELSKQNPQLLRLIQE+++EF
Sbjct: 232  SNAGGAAGGGSLDFLRNNQQFQALREMVHTNPQILQPMLQELSKQNPQLLRLIQENNDEF 291

Query: 983  LQLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDR 1162
            L L+NE  +  +GD  DQPD+DEMPH ISVTPEEQ A+ RLEA+GFDRARVIEAF ACDR
Sbjct: 292  LGLLNENFDAGDGDFLDQPDEDEMPHAISVTPEEQEAIGRLEAMGFDRARVIEAFFACDR 351

Query: 1163 NEELAANYLLEHYGEED 1213
            NE+LA NYLLEH G+E+
Sbjct: 352  NEQLAVNYLLEHAGDEE 368


>ref|XP_002303970.1| DNA repair protein RAD23 [Populus trichocarpa]
            gi|222841402|gb|EEE78949.1| DNA repair protein RAD23
            [Populus trichocarpa]
          Length = 358

 Score =  441 bits (1135), Expect = e-121
 Identities = 234/370 (63%), Positives = 271/370 (73%), Gaps = 6/370 (1%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKG+HFEI+V P DTI+ VKKNIE  QGKDNYP GQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIKVHPTDTIMGVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQAPSQVPSEVPAQP 475
            +NKV EDGFLVVML                S+T  V  P     P+  P+ + +  P   
Sbjct: 61   DNKVTEDGFLVVMLSKSKTGTAG------TSSTQPVSTP-----PTTTPTSISTPAPDAQ 109

Query: 476  ILSDA----QAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERAVEYLY 643
              + +    QAASNLV GSN+EQT+ Q+++MGGG WD++T+ RALRAAYNNPERAV+YLY
Sbjct: 110  AFAQSDTYGQAASNLVAGSNLEQTLQQIMDMGGGTWDKETVTRALRAAYNNPERAVDYLY 169

Query: 644  SGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGPLFGVPNSSPLNMFPQ--XXXXXXX 817
            SGIP TAE+A+P   FP+   +  GA     AA  P FG PNSSPLNMFP+         
Sbjct: 170  SGIPETAEVAVPVARFPADQATETGAAP---AAPAPAFGAPNSSPLNMFPETISGGGGGA 226

Query: 818  XXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEFLQLMN 997
                  LDFLRNNQQF   R+MV ANPQILQPMLQEL KQNPQLLR+IQEHH EFLQL+N
Sbjct: 227  GGGLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRIIQEHHAEFLQLIN 286

Query: 998  EPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDRNEELA 1177
            EP++G EGD+FDQPDQD MPH I+VTP EQ A+ERLEA+GFDRA VIEAFLACDRNE+LA
Sbjct: 287  EPLDGSEGDIFDQPDQD-MPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEQLA 345

Query: 1178 ANYLLEHYGE 1207
            ANYLLE+ G+
Sbjct: 346  ANYLLENAGD 355


>ref|XP_004235877.1| PREDICTED: putative DNA repair protein RAD23-1-like [Solanum
            lycopersicum]
          Length = 366

 Score =  440 bits (1131), Expect = e-121
 Identities = 238/374 (63%), Positives = 279/374 (74%), Gaps = 10/374 (2%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKG+HFEIRVQP+DTI+AVKKNIE VQGKDNYP GQQLLIHNGKVLKDE+TL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLL 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDA---PSQAPSQV--PSE 460
            EN V EDGFLVVML              Q  AT+   +P        PSQAP  V   S+
Sbjct: 61   ENNVSEDGFLVVMLSKSKTASSSGTTSAQQPATAA--NPTTTPEVIPPSQAPKDVVSASD 118

Query: 461  VPAQPILSD--AQAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPERAVE 634
              A  + +D  +QAASNLV G+N+EQTI QL++MGGG+WD++T+ RALRAAYNNPERAV+
Sbjct: 119  AAAASLPADDYSQAASNLVAGNNLEQTIQQLMDMGGGSWDKETVTRALRAAYNNPERAVD 178

Query: 635  YLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGPLF---GVPNSSPLNMFPQXXX 805
            YLYSGIP TAE+++P        V+  G ++A V  A P+    G PNS+PLN+FPQ   
Sbjct: 179  YLYSGIPETAEVSVP--------VARGGVNSAAVPTAAPIAPSSGAPNSAPLNLFPQENV 230

Query: 806  XXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEFL 985
                      LDFLRNNQQF   R+MV ANPQILQPMLQEL KQNPQLLR IQEH +EFL
Sbjct: 231  AGGGGAGLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRSIQEHDQEFL 290

Query: 986  QLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDRN 1165
            QL+NEP++G +GD+FDQ +Q E+PHT+SVTPEEQ  +ERLEA+GFDRA VIEAFLACDRN
Sbjct: 291  QLINEPVDGSDGDMFDQAEQ-EIPHTVSVTPEEQEVIERLEAMGFDRALVIEAFLACDRN 349

Query: 1166 EELAANYLLEHYGE 1207
            EELAANYLLEH G+
Sbjct: 350  EELAANYLLEHAGD 363


>ref|XP_006341431.1| PREDICTED: ubiquitin receptor RAD23b-like [Solanum tuberosum]
          Length = 367

 Score =  439 bits (1130), Expect = e-120
 Identities = 240/377 (63%), Positives = 277/377 (73%), Gaps = 13/377 (3%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKG+HFEIRVQP+DTI+AVKKNIE VQGKDNYP GQQLLIHNGKVLKDE+TL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLL 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSVVQHPALKDAPSQAPSQVP-SEVPAQ 472
            EN V EDGFLVVML                S T+  Q PA    P+  P  +P S+VP  
Sbjct: 61   ENNVSEDGFLVVMLSKSKTA--------SSSGTTSAQQPATAANPTTTPEVIPPSQVPKD 112

Query: 473  PI-LSDA-----------QAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNN 616
             +  SDA           QAASNLV G+++EQTI QL++MGGG+WD++T+ RALRAAYNN
Sbjct: 113  VVSASDAAAASLPADDYSQAASNLVAGNSLEQTIQQLMDMGGGSWDKETVTRALRAAYNN 172

Query: 617  PERAVEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGPLFGVPNSSPLNMFPQ 796
            PERAV+YLYSGIP TAE+A+P       V S+  A TA  A   P  G PNS+PLN+FPQ
Sbjct: 173  PERAVDYLYSGIPETAEVAVPVAR--GGVNSAAAAPTA--APTPPSSGAPNSAPLNLFPQ 228

Query: 797  XXXXXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHE 976
                         LDFLRNNQQF   R+MV ANPQILQPMLQEL KQNPQLLR IQEH +
Sbjct: 229  ENVAGAGSAGLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRSIQEHDQ 288

Query: 977  EFLQLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLAC 1156
            EFLQL+NEP++G +GD+FDQ +Q E+PHT+SVTPEEQ  +ERLEA+GFDRA VIEAFLAC
Sbjct: 289  EFLQLINEPVDGSDGDMFDQAEQ-EIPHTVSVTPEEQEVIERLEAMGFDRALVIEAFLAC 347

Query: 1157 DRNEELAANYLLEHYGE 1207
            DRNEELAANYLLEH G+
Sbjct: 348  DRNEELAANYLLEHAGD 364


>ref|XP_006845449.1| hypothetical protein AMTR_s00019p00116110 [Amborella trichopoda]
            gi|548848021|gb|ERN07124.1| hypothetical protein
            AMTR_s00019p00116110 [Amborella trichopoda]
          Length = 370

 Score =  439 bits (1128), Expect = e-120
 Identities = 241/374 (64%), Positives = 273/374 (72%), Gaps = 10/374 (2%)
 Frame = +2

Query: 116  MKLTVKTLKGTHFEIRVQPNDTIIAVKKNIEQVQGKDNYPWGQQLLIHNGKVLKDETTLE 295
            MKLTVKTLKG HFEIRVQ NDT++AVKK+IE++QGKDNYP GQQLLIHNGKVLKDETTLE
Sbjct: 1    MKLTVKTLKGNHFEIRVQANDTVMAVKKHIEELQGKDNYPCGQQLLIHNGKVLKDETTLE 60

Query: 296  ENKVREDGFLVVMLXXXXXXXXXXXXXXQPSATSV-VQHPALKDAPSQAPSQVPSEVPAQ 472
            ENKV EDGFLVVML              QPSA +   Q+P    AP   P  + S+ PA+
Sbjct: 61   ENKVSEDGFLVVMLSKSKTSGSGGATSAQPSAAATNPQNPT--PAPESRPQPMASQNPAR 118

Query: 473  PILSDA---------QAASNLVEGSNMEQTIDQLLEMGGGNWDRDTILRALRAAYNNPER 625
               SDA         QAAS LV G+N+EQ I Q+L+MGG +WDRDT+ RALRAAYNNPER
Sbjct: 119  G--SDAGPEVTNVYGQAASTLVAGNNLEQMIQQILDMGGDSWDRDTVTRALRAAYNNPER 176

Query: 626  AVEYLYSGIPITAEIALPGDHFPSSVVSSQGADTADVAAAGPLFGVPNSSPLNMFPQXXX 805
            AVEYLYSGIP  AE+A+P    P+S  ++     ADVA   P    PN+SPLNMFPQ   
Sbjct: 177  AVEYLYSGIPAAAEVAVPV--VPTSAQAADATTEADVAGVAPNSAGPNASPLNMFPQGSP 234

Query: 806  XXXXXXXXXXLDFLRNNQQFLEFRAMVHANPQILQPMLQELSKQNPQLLRLIQEHHEEFL 985
                      LDFLRNN+QF   R MV ANPQILQPMLQELSKQNPQLLRLIQEH  EFL
Sbjct: 235  TSGAIAGGGSLDFLRNNEQFQTLRHMVQANPQILQPMLQELSKQNPQLLRLIQEHQAEFL 294

Query: 986  QLMNEPIEGLEGDLFDQPDQDEMPHTISVTPEEQAAMERLEALGFDRARVIEAFLACDRN 1165
            QL+NEP EG EGDLF Q +QD MP +I+VTPEE+ A+ERLEA+GFDRA VIEAFLACDRN
Sbjct: 295  QLINEPAEGAEGDLFGQAEQD-MPQSITVTPEEREAIERLEAMGFDRALVIEAFLACDRN 353

Query: 1166 EELAANYLLEHYGE 1207
            EELA NYLLE+ G+
Sbjct: 354  EELAINYLLENPGD 367