BLASTX nr result

ID: Zingiber24_contig00023545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00023545
         (501 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004957488.1| PREDICTED: myb-related protein Hv1-like [Set...    68   1e-09
gb|AAO21377.1| R2R3 MYB protein MYB1 [Lolium perenne]                  62   8e-08

>ref|XP_004957488.1| PREDICTED: myb-related protein Hv1-like [Setaria italica]
          Length = 246

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
 Frame = +2

Query: 2   NTHIKRKLTSRGIDPATHQKVCAPITNLSVSF------VKVEEKKGGFLRCDQDCTSSRG 163
           NTHI+RKL SRGIDP TH+ +    +N+++SF          E+KG   R ++   ++ G
Sbjct: 109 NTHIRRKLLSRGIDPVTHRPINEHASNITISFEAAAAAATAREEKGAVFRLEEPKAAAIG 168

Query: 164 SNDKGRPW-QSESYKCXXXXXXXXXXXXXXGGI--------GFCINCSWGLHLRSEECKC 316
            +     W Q +  KC                +        G C +CS GL  +S +CKC
Sbjct: 169 RDQNAADWGQGKPLKCPDLNLDLCISPPCQEPMMKPVKREAGLCFSCSLGLP-KSADCKC 227

Query: 317 DTFHGIKSQLWDTKAL 364
             F G+++ + D ++L
Sbjct: 228 SNFLGLRTAMLDFRSL 243


>gb|AAO21377.1| R2R3 MYB protein MYB1 [Lolium perenne]
          Length = 158

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 16/137 (11%)
 Frame = +2

Query: 2   NTHIKRKLTSRGIDPATHQKVCAPI-TNLSVSFVKV----EEKKGGFLRCDQDC-TSSRG 163
           NTHI+RKL SRGIDP TH+ +     +N+++SF       E+ KG   R D+    +   
Sbjct: 19  NTHIRRKLMSRGIDPVTHRSINEQHGSNITISFEAAAAAREDNKGAVFRRDEPTKVAITQ 78

Query: 164 SNDKGRPW-QSESYKC---------XXXXXXXXXXXXXXGGIGFCINCSWGLHLRSEECK 313
           +N     W Q +  KC                        G+G C +CS G   +S +CK
Sbjct: 79  ANHHQMEWGQGKPLKCPDLNLDLCISPPIQEEKPVVKREAGVGVCFSCSLGGLPKSTDCK 138

Query: 314 CDTFHGIKSQLWDTKAL 364
           C +F G ++ + D ++L
Sbjct: 139 CSSFIGFRTAMLDFRSL 155


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