BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00023481
         (1737 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058413.2| Os06g0688100 [Oryza sativa Japonica Group] g...   486   e-134
gb|EEC81212.1| hypothetical protein OsI_24246 [Oryza sativa Indi...   486   e-134
ref|XP_006656405.1| PREDICTED: RNA polymerase I-specific transcr...   478   e-132
ref|XP_003563455.1| PREDICTED: RNA polymerase I-specific transcr...   468   e-129
ref|XP_006656406.1| PREDICTED: RNA polymerase I-specific transcr...   456   e-125
ref|XP_004966190.1| PREDICTED: RNA polymerase I-specific transcr...   445   e-122
ref|XP_004966189.1| PREDICTED: RNA polymerase I-specific transcr...   431   e-118
gb|AFW69236.1| hypothetical protein ZEAMMB73_457339 [Zea mays]        408   e-111
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              405   e-110
gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]     400   e-109
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   398   e-108
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   394   e-107
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   394   e-107
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   392   e-106
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   391   e-106
gb|EOX90600.1| Major facilitator superfamily protein isoform 1 [...   391   e-106
ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcr...   387   e-105
ref|XP_002524432.1| transcription initiation factor ia, putative...   387   e-105
ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcr...   385   e-104
ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcr...   385   e-104

>ref|NP_001058413.2| Os06g0688100 [Oryza sativa Japonica Group]
            gi|52076695|dbj|BAD45608.1| putative RNA polymerase I
            transcription factor RRN3 [Oryza sativa Japonica Group]
            gi|52077031|dbj|BAD46064.1| putative RNA polymerase I
            transcription factor RRN3 [Oryza sativa Japonica Group]
            gi|215704896|dbj|BAG94924.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222636116|gb|EEE66248.1|
            hypothetical protein OsJ_22429 [Oryza sativa Japonica
            Group] gi|255677342|dbj|BAF20327.2| Os06g0688100 [Oryza
            sativa Japonica Group]
          Length = 622

 Score =  486 bits (1250), Expect = e-134
 Identities = 257/492 (52%), Positives = 343/492 (69%), Gaps = 1/492 (0%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MG EL+  D  V   +   +SDS+AF  V +V+  VRM P  V   +KE+YD L+++V+ 
Sbjct: 1    MGAELRRDDMEVAEED---ISDSQAFRFVEHVLQSVRMDPFQVDLRDKEEYDSLLSIVDS 57

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
             K+   DDEAL+ T LKALS AV ++D +YH +LLNNIF  SIW    D R+ALL LIT 
Sbjct: 58   SKKRSYDDEALLVTTLKALSEAVSKIDIMYHHALLNNIFTMSIWYLNSDTRDALLSLITR 117

Query: 617  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 796
            LA V D+FL  CL  L++N  PP  L A   Q  RWL RK+E+  +++ +L  I+  VPL
Sbjct: 118  LAAVADQFLRECLQMLVNNFTPPGSLTAFIGQP-RWLARKKEIYSQLHESLRMISDTVPL 176

Query: 797  APARLKILIEKCMPRFTEDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLIDLDVN 976
            AP  LK +I++ MP+  ++K  ++++VE +LGL+ + +G  +G+ +LA+VVDLL +LDVN
Sbjct: 177  APRMLKDIIDRSMPKLFDNKAKMVSFVECMLGLDNDRMGDLIGALLLAKVVDLLTELDVN 236

Query: 977  IPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVK-NTFADKLDGLMLVACEH 1153
            I WEDILQ+E NKGIF +EL +  ED++  ++    T  L   N  A+KLDGLM+V CEH
Sbjct: 237  ITWEDILQDEHNKGIFDMELEDLGEDED--SLGQEGTKALFGGNACAEKLDGLMVVFCEH 294

Query: 1154 LKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDI 1333
            LKSC E G L + F+ L  IF+ ++L++HKSKF QF+MFYACSLDP+ CGL+FA+ L+DI
Sbjct: 295  LKSCKEHGRLPQEFDILKTIFRASVLRVHKSKFAQFIMFYACSLDPEICGLEFALFLSDI 354

Query: 1334 FISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISP 1513
            FI K+ED  SRM A++Y+ SYL+RA+FI +  V  ILKRLVDWC +YC LQ++      P
Sbjct: 355  FIKKEEDSISRMSAVSYVGSYLSRARFISADTVVGILKRLVDWCVDYCDLQNNIRITTKP 414

Query: 1514 QADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQ 1693
               ++FY+ CQAVMYILCFRLRSI D P LK  LF++P   IL HP L+PLKVCLP IV 
Sbjct: 415  INHQIFYASCQAVMYILCFRLRSIMDYPNLKAQLFNMPFGYILTHP-LEPLKVCLPSIVD 473

Query: 1694 EFLRQAQTARLF 1729
            EFLRQA+ ARLF
Sbjct: 474  EFLRQAKAARLF 485


>gb|EEC81212.1| hypothetical protein OsI_24246 [Oryza sativa Indica Group]
          Length = 622

 Score =  486 bits (1250), Expect = e-134
 Identities = 257/492 (52%), Positives = 343/492 (69%), Gaps = 1/492 (0%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MG EL+  D  V   +   +SDS+AF  V +V+  VRM P  V   +KE+YD L+++V+ 
Sbjct: 1    MGAELRRDDMEVAEED---ISDSQAFRFVEHVLQSVRMDPFQVDLRDKEEYDSLLSIVDS 57

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
             K+   DDEAL+ T LKALS AV ++D +YH +LLNNIF  SIW    D R+ALL LIT 
Sbjct: 58   SKKRSYDDEALLVTTLKALSEAVSKIDIMYHHALLNNIFTMSIWYLNSDTRDALLSLITR 117

Query: 617  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 796
            LA V D+FL  CL  L++N  PP  L A   Q  RWL RK+E+  +++ +L  I+  VPL
Sbjct: 118  LAAVADQFLRECLQMLVNNFTPPGSLTAFIGQP-RWLARKKEIYSQLHESLRMISDTVPL 176

Query: 797  APARLKILIEKCMPRFTEDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLIDLDVN 976
            AP  LK +I++ MP+  ++K  ++++VE +LGL+ + +G  +G+ +LA+VVDLL +LDVN
Sbjct: 177  APRMLKDIIDRSMPKLFDNKAKMVSFVECMLGLDNDRMGDLIGALLLAKVVDLLTELDVN 236

Query: 977  IPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVK-NTFADKLDGLMLVACEH 1153
            I WEDILQ+E NKGIF +EL +  ED++  ++    T  L   N  A+KLDGLM+V CEH
Sbjct: 237  ITWEDILQDEHNKGIFDMELEDLGEDED--SLGQEGTKALFGGNACAEKLDGLMVVFCEH 294

Query: 1154 LKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDI 1333
            LKSC E G L + F+ L  IF+ ++L++HKSKF QF+MFYACSLDP+ CGL+FA+ L+DI
Sbjct: 295  LKSCKEHGRLPQEFDILKTIFRASVLRVHKSKFAQFIMFYACSLDPEICGLEFALFLSDI 354

Query: 1334 FISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISP 1513
            FI K+ED  SRM A++Y+ SYL+RA+FI +  V  ILKRLVDWC +YC LQ++      P
Sbjct: 355  FIKKEEDSISRMSAVSYVGSYLSRARFISADTVVGILKRLVDWCVDYCDLQNNIGITTKP 414

Query: 1514 QADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQ 1693
               ++FY+ CQAVMYILCFRLRSI D P LK  LF++P   IL HP L+PLKVCLP IV 
Sbjct: 415  INHQIFYASCQAVMYILCFRLRSIMDYPNLKAQLFNMPFGYILTHP-LEPLKVCLPSIVD 473

Query: 1694 EFLRQAQTARLF 1729
            EFLRQA+ ARLF
Sbjct: 474  EFLRQAKAARLF 485


>ref|XP_006656405.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Oryza brachyantha]
          Length = 622

 Score =  478 bits (1229), Expect = e-132
 Identities = 253/492 (51%), Positives = 344/492 (69%), Gaps = 1/492 (0%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MG EL+  D  V   E+  +SDS+AF  V +V+  VRM P LV   +K+QYD L+ +V+ 
Sbjct: 1    MGAELRPDDMEV---EEEGVSDSQAFRFVEHVLQSVRMDPVLVDLKDKDQYDSLLKIVDS 57

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
             K+   DDEAL+   LKALS AV ++D  YH  LL+NIF  ++W    D R+ALLELIT 
Sbjct: 58   SKKRSFDDEALLVPTLKALSEAVSKIDITYHHELLSNIFTMTLWYMQRDTRDALLELITR 117

Query: 617  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 796
            LA V D+FL  CL  L++N  PP  L A   Q  RW  RK+E+  +++ +L  I+  +PL
Sbjct: 118  LAAVADQFLRECLQMLVNNFTPPGPLTAFIGQP-RWHARKKEIYSQLHESLRVISDTIPL 176

Query: 797  APARLKILIEKCMPRFTEDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLIDLDVN 976
            AP  LK +I++ MP+  ++K   +++VE ILGL+ + +G  +GS +LA+VVDLL +LDVN
Sbjct: 177  APRMLKDIIDRSMPKLFDNKAKTISFVECILGLDNDRMGDLIGSLLLAKVVDLLTELDVN 236

Query: 977  IPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVK-NTFADKLDGLMLVACEH 1153
            I WEDILQEE +KGIF +EL + ++D++  ++    T  L   N  A+KLDGLM+V CEH
Sbjct: 237  ITWEDILQEEHHKGIFDMELEDLDDDED--SLGQEGTKALFGGNACAEKLDGLMVVFCEH 294

Query: 1154 LKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDI 1333
            LK+CSE G LL+ F+ L  IF+ ++L +HKSKF QF++FYACSLDP+ CG++F++ LTDI
Sbjct: 295  LKACSEHGRLLKEFDILKTIFRTSVLTVHKSKFAQFIVFYACSLDPEICGIEFSLFLTDI 354

Query: 1334 FISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISP 1513
            FI K+ED  SRM A++Y+ SYL+RA+FI +  V ++LKRLVDWC +YC LQ++      P
Sbjct: 355  FIKKEEDLLSRMSAVSYVGSYLSRARFISADTVVAVLKRLVDWCVDYCDLQNNKGIITKP 414

Query: 1514 QADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQ 1693
               ++FY+ CQAVMYILCFRLRSI D P LK  LF++P   IL HP L+PLKVCLP+IV 
Sbjct: 415  INHQIFYASCQAVMYILCFRLRSIMDYPNLKSQLFNMPFGYILTHP-LEPLKVCLPVIVD 473

Query: 1694 EFLRQAQTARLF 1729
            EFLRQA+ ARLF
Sbjct: 474  EFLRQAKAARLF 485


>ref|XP_003563455.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Brachypodium distachyon]
          Length = 622

 Score =  468 bits (1203), Expect = e-129
 Identities = 242/472 (51%), Positives = 330/472 (69%)
 Frame = +2

Query: 314  LSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNPGKRIGQDDEALMATALKAL 493
            +SD+ AF  V +V+  V M P LV  S++EQYD L+ +++  K+   DDEAL+ T LKAL
Sbjct: 17   ISDTAAFRMVEHVLQSVSMDPFLVDPSDREQYDILLNILDAVKKRSLDDEALLVTTLKAL 76

Query: 494  SRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITALATVPDKFLDNCLYTLLHN 673
            S AV ++D +YH  LLNNIF   IW +  D R+A L+LIT LA V DK+L  CL  +++N
Sbjct: 77   SEAVSKIDMMYHYILLNNIFGMCIWFFQRDTRDAYLDLITRLAAVADKYLRECLQVVVNN 136

Query: 674  LRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPLAPARLKILIEKCMPRFTED 853
              PP  L  P+ +  RW+ RK+E+  +++  L  I+  VPLAP  LK +I++ MP+  ++
Sbjct: 137  FTPPGPL-VPYMEQPRWIARKKEIYFQLHECLKTISDTVPLAPRMLKDIIDRSMPKLFDN 195

Query: 854  KYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLIDLDVNIPWEDILQEEPNKGIFAIE 1033
            K  ++++VE ++GL+ + +G  +G+ +LA+VVDLL +LDVNI  EDI QEE NKGIF +E
Sbjct: 196  KAKMVSFVECMMGLDTDRMGDLIGALLLAKVVDLLTELDVNITLEDINQEEHNKGIFDME 255

Query: 1034 LGECNEDDEYTTIPNMDTLGLVKNTFADKLDGLMLVACEHLKSCSESGHLLEVFERLSEI 1213
            L + +ED++         L L  N  A+KLDGLM+V CEHLKSC+E G+L + F+ L  I
Sbjct: 256  LEDLDEDEDGFGQEGTKVL-LGGNACAEKLDGLMVVVCEHLKSCAEHGYLTKEFDTLKTI 314

Query: 1214 FQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDIFISKDEDPDSRMKAIAYLAS 1393
            F+ ++L++HKSKF QF+MFYACSLDP+ CGL+FAI LTD F  K+EDP SRM A++Y+ S
Sbjct: 315  FRASLLRVHKSKFAQFIMFYACSLDPEICGLEFAIFLTDTFTKKEEDPISRMSAVSYVGS 374

Query: 1394 YLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISPQADRVFYSGCQAVMYILCFR 1573
            YL+RA+FI +  V  ILKRLV+WC EYC LQ+     I+    ++FY+ CQAVMY+LCFR
Sbjct: 375  YLSRARFISADTVVGILKRLVEWCVEYCDLQNK-RGTIAKPNHQIFYATCQAVMYVLCFR 433

Query: 1574 LRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQEFLRQAQTARLF 1729
            LRSI D P LK  LFH+P   +L HP L+PLKVCLP IV EFLRQA+ A LF
Sbjct: 434  LRSIMDYPNLKSELFHMPFGFLLTHP-LEPLKVCLPSIVNEFLRQAKPAGLF 484


>ref|XP_006656406.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Oryza brachyantha]
          Length = 597

 Score =  456 bits (1172), Expect = e-125
 Identities = 236/453 (52%), Positives = 321/453 (70%), Gaps = 1/453 (0%)
 Frame = +2

Query: 374  PSLVPQSNKEQYDYLVTVVNPGKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIF 553
            P LV   +K+QYD L+ +V+  K+   DDEAL+   LKALS AV ++D  YH  LL+NIF
Sbjct: 12   PVLVDLKDKDQYDSLLKIVDSSKKRSFDDEALLVPTLKALSEAVSKIDITYHHELLSNIF 71

Query: 554  MSSIWDYGLDARNALLELITALATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMR 733
              ++W    D R+ALLELIT LA V D+FL  CL  L++N  PP  L A   Q  RW  R
Sbjct: 72   TMTLWYMQRDTRDALLELITRLAAVADQFLRECLQMLVNNFTPPGPLTAFIGQP-RWHAR 130

Query: 734  KEEVRREVYLALNCINTLVPLAPARLKILIEKCMPRFTEDKYVLMTYVEGILGLERNEIG 913
            K+E+  +++ +L  I+  +PLAP  LK +I++ MP+  ++K   +++VE ILGL+ + +G
Sbjct: 131  KKEIYSQLHESLRVISDTIPLAPRMLKDIIDRSMPKLFDNKAKTISFVECILGLDNDRMG 190

Query: 914  KFLGSTVLARVVDLLIDLDVNIPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLG 1093
              +GS +LA+VVDLL +LDVNI WEDILQEE +KGIF +EL + ++D++  ++    T  
Sbjct: 191  DLIGSLLLAKVVDLLTELDVNITWEDILQEEHHKGIFDMELEDLDDDED--SLGQEGTKA 248

Query: 1094 LVK-NTFADKLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMF 1270
            L   N  A+KLDGLM+V CEHLK+CSE G LL+ F+ L  IF+ ++L +HKSKF QF++F
Sbjct: 249  LFGGNACAEKLDGLMVVFCEHLKACSEHGRLLKEFDILKTIFRTSVLTVHKSKFAQFIVF 308

Query: 1271 YACSLDPDTCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKR 1450
            YACSLDP+ CG++F++ LTDIFI K+ED  SRM A++Y+ SYL+RA+FI +  V ++LKR
Sbjct: 309  YACSLDPEICGIEFSLFLTDIFIKKEEDLLSRMSAVSYVGSYLSRARFISADTVVAVLKR 368

Query: 1451 LVDWCFEYCQLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPV 1630
            LVDWC +YC LQ++      P   ++FY+ CQAVMYILCFRLRSI D P LK  LF++P 
Sbjct: 369  LVDWCVDYCDLQNNKGIITKPINHQIFYASCQAVMYILCFRLRSIMDYPNLKSQLFNMPF 428

Query: 1631 DSILHHPVLDPLKVCLPLIVQEFLRQAQTARLF 1729
              IL HP L+PLKVCLP+IV EFLRQA+ ARLF
Sbjct: 429  GYILTHP-LEPLKVCLPVIVDEFLRQAKAARLF 460


>ref|XP_004966190.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Setaria italica]
          Length = 618

 Score =  445 bits (1145), Expect = e-122
 Identities = 229/474 (48%), Positives = 324/474 (68%), Gaps = 3/474 (0%)
 Frame = +2

Query: 317  SDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNPGKRIGQDDEALMATALKALS 496
            SDS  F  V +V+  VRM P L+   +K+ YD+L+  V+P K+  +D+ A++ T LKALS
Sbjct: 15   SDSHMFRQVQHVLQSVRMDPFLIDLRDKDHYDFLLLAVDPTKKRSKDEMAVLVTILKALS 74

Query: 497  RAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITALATVPDKFLDNCLYTLLHNL 676
             AV ++D +YH +LL+NIF + IW   LD R+ALL LIT LA V D++L  CL  L++N 
Sbjct: 75   EAVSKIDVMYHHALLHNIFTTCIWYLDLDTRDALLHLITRLAAVADQYLRECLQMLVNNF 134

Query: 677  RPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPLAPARLKILIEKCMPRFTEDK 856
             PP     P  +  R L +K+E+  +++  L  I+  VPLA   LK ++ + MP+  ++K
Sbjct: 135  TPPGPY-VPLMEQPRMLAKKKEIYSQLHETLKMISDTVPLASRMLKDVLNRSMPKLFDNK 193

Query: 857  YVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLIDLDVNIPWEDILQEEPNKGIFAIEL 1036
              ++++VE +LGL+ + +G  +G+T+  +VVDLL +LDVNI WEDILQEE NKGIF +EL
Sbjct: 194  AKMLSFVECMLGLDTDRLGDLIGTTLFEKVVDLLTELDVNITWEDILQEEHNKGIFDMEL 253

Query: 1037 GECNEDDEYTTIPNMDTLGLVKNTFADKLDGLMLVACEHLKSCSESGHLLEVFERLSEIF 1216
             + ++DD+         L    N  A+KLDGLM+V CEHLKSC+    L + F  L  IF
Sbjct: 254  EDLDDDDDNFGQEGTKAL-FGGNVCAEKLDGLMVVVCEHLKSCNRD-RLFKEFGILKTIF 311

Query: 1217 QRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASY 1396
            ++++LK+HKSKF QF+MFYACSLDP+ CG+ FA+ LTDIF  K++DP +RM A++Y+ SY
Sbjct: 312  RKSVLKVHKSKFAQFIMFYACSLDPEICGVDFALFLTDIFTKKEDDPIARMSAVSYVGSY 371

Query: 1397 LARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNK---ISPQADRVFYSGCQAVMYILC 1567
            L+RA+FI +  V ++LKRLV+WC +Y +     VN+     P+  ++FY+ CQAVMY+LC
Sbjct: 372  LSRARFISADTVVAVLKRLVEWCIDYIKRDRDPVNQAKATKPKDHQIFYASCQAVMYVLC 431

Query: 1568 FRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQEFLRQAQTARLF 1729
            FRLRSI D P LK  LF +P++SIL    L+PLKVCLP IV EFLRQ++ ARLF
Sbjct: 432  FRLRSIMDYPNLKSQLFQMPIESIL-MDTLEPLKVCLPSIVNEFLRQSRAARLF 484


>ref|XP_004966189.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Setaria italica]
          Length = 644

 Score =  431 bits (1108), Expect = e-118
 Identities = 229/500 (45%), Positives = 324/500 (64%), Gaps = 29/500 (5%)
 Frame = +2

Query: 317  SDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNPGKRIGQDDEALMATALKALS 496
            SDS  F  V +V+  VRM P L+   +K+ YD+L+  V+P K+  +D+ A++ T LKALS
Sbjct: 15   SDSHMFRQVQHVLQSVRMDPFLIDLRDKDHYDFLLLAVDPTKKRSKDEMAVLVTILKALS 74

Query: 497  RAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITALATVPDKFLDNCLYTLLHNL 676
             AV ++D +YH +LL+NIF + IW   LD R+ALL LIT LA V D++L  CL  L++N 
Sbjct: 75   EAVSKIDVMYHHALLHNIFTTCIWYLDLDTRDALLHLITRLAAVADQYLRECLQMLVNNF 134

Query: 677  RPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPLAPARLKILIEKCMPRFTEDK 856
             PP     P  +  R L +K+E+  +++  L  I+  VPLA   LK ++ + MP+  ++K
Sbjct: 135  TPPGPY-VPLMEQPRMLAKKKEIYSQLHETLKMISDTVPLASRMLKDVLNRSMPKLFDNK 193

Query: 857  YVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLIDLDVNIPWEDILQEEPNKGIFAIEL 1036
              ++++VE +LGL+ + +G  +G+T+  +VVDLL +LDVNI WEDILQEE NKGIF +EL
Sbjct: 194  AKMLSFVECMLGLDTDRLGDLIGTTLFEKVVDLLTELDVNITWEDILQEEHNKGIFDMEL 253

Query: 1037 GECNEDDEYTTIPNMDTLGLVKNTFADKLDGLMLVACEHLKSCSESGHLLEVFERLSEIF 1216
             + ++DD+         L    N  A+KLDGLM+V CEHLKSC+    L + F  L  IF
Sbjct: 254  EDLDDDDDNFGQEGTKAL-FGGNVCAEKLDGLMVVVCEHLKSCNRD-RLFKEFGILKTIF 311

Query: 1217 QRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASY 1396
            ++++LK+HKSKF QF+MFYACSLDP+ CG+ FA+ LTDIF  K++DP +RM A++Y+ SY
Sbjct: 312  RKSVLKVHKSKFAQFIMFYACSLDPEICGVDFALFLTDIFTKKEDDPIARMSAVSYVGSY 371

Query: 1397 LARAKFIPSSLVASILK--------------------------RLVDWCFEYCQLQDSWV 1498
            L+RA+FI +  V ++LK                          RLV+WC +Y +     V
Sbjct: 372  LSRARFISADTVVAVLKRWLHSEHRLCMFYAFIHLRFMFYLLHRLVEWCIDYIKRDRDPV 431

Query: 1499 NK---ISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLK 1669
            N+     P+  ++FY+ CQAVMY+LCFRLRSI D P LK  LF +P++SIL    L+PLK
Sbjct: 432  NQAKATKPKDHQIFYASCQAVMYVLCFRLRSIMDYPNLKSQLFQMPIESIL-MDTLEPLK 490

Query: 1670 VCLPLIVQEFLRQAQTARLF 1729
            VCLP IV EFLRQ++ ARLF
Sbjct: 491  VCLPSIVNEFLRQSRAARLF 510


>gb|AFW69236.1| hypothetical protein ZEAMMB73_457339 [Zea mays]
          Length = 620

 Score =  408 bits (1048), Expect = e-111
 Identities = 235/498 (47%), Positives = 319/498 (64%), Gaps = 7/498 (1%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MG E QGY+   G   D     SE F  V  V+  VRM P L+   +K+ YDY++ +++P
Sbjct: 1    MGAE-QGYEDMQGTFRD-----SEVFEFVGKVLQSVRMDPFLIDIRDKDYYDYMLGIIDP 54

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
             K+   DDEA+  T L+ALS+AV ++D VYH +LL+NIF   +W    D R   L+LIT 
Sbjct: 55   TKKRSTDDEAMFVTILRALSQAVSKIDTVYHHALLHNIFTMCVWHLHSDTRVVFLDLITR 114

Query: 617  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 796
            LA V D++L  CL  L++N  PP  L   + +  RWL +KE++  ++  +L  I+  VPL
Sbjct: 115  LAAVADQYLRECLQMLVNNFTPPGPL-IRYIEEPRWLPKKEKIYSQLQESLKMISDTVPL 173

Query: 797  APARLKILIEKCMPRFTEDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLIDLDVN 976
            AP  LK +I++ MP+  + K  ++++V+ +LGL+   +   +GS++L +VV LL +LDVN
Sbjct: 174  APRMLKDIIDRSMPKLFDSKAKMVSFVKCMLGLDA-VVWDIIGSSLLEKVVYLLTELDVN 232

Query: 977  IPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLG----LVKNTFADKLDGLMLVA 1144
            I WEDILQ+E NKGIF +EL +  ED++     N+   G       N  A+KLDGLM+V 
Sbjct: 233  ITWEDILQDEHNKGIFDMELEDLAEDED-----NLGQEGTKVHFGGNMCAEKLDGLMVVV 287

Query: 1145 CEHLKS-CSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIM 1321
            CEHLKS   E   L++ F  L  IF+  +L++HKSKF QF+MFYACSL P+  G  FA  
Sbjct: 288  CEHLKSRVEEPERLIKEFVTLKAIFKSHVLRVHKSKFAQFIMFYACSLHPE-IGDGFANF 346

Query: 1322 LTDIFISKD--EDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSW 1495
            LTDIFI KD  ED  +R+ A++Y+ SYL+RA+FI  ++V S+LKRLVDWC  YC  Q   
Sbjct: 347  LTDIFIDKDKNEDAITRVSAVSYVGSYLSRARFISVNIVVSVLKRLVDWCDYYCGHQLDN 406

Query: 1496 VNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVC 1675
                +P   ++FY+ CQAVMY+LCFRLRSI D P LKQ LF + +  IL HP L PLKVC
Sbjct: 407  GVTANPIKHQLFYASCQAVMYVLCFRLRSIMDYPNLKQQLFRMRIRDILVHP-LQPLKVC 465

Query: 1676 LPLIVQEFLRQAQTARLF 1729
            LP IV EFLRQA  A LF
Sbjct: 466  LPSIVNEFLRQATAASLF 483


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  405 bits (1040), Expect = e-110
 Identities = 229/498 (45%), Positives = 317/498 (63%), Gaps = 7/498 (1%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MGVEL         +E+   SDSE       ++  VR A   VP  + + YD L+ V++ 
Sbjct: 1    MGVELATDRAGFHEMEEVNFSDSE-------LVYHVRHALQSVPLGDSDSYDQLIGVLHH 53

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
             +R+  D+ AL+ T+LKALS AV  +D V+H SLL++IF  S+W+YG D  +ALLELI +
Sbjct: 54   KERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILS 113

Query: 617  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 796
            LA     +LD  L  L+ N  PP  L   F +  R L RK++V   V+  L  I  LVPL
Sbjct: 114  LAASSGNYLDCSLDMLVSNFMPPYSL-LDFLKQPRGLARKDQVLSRVHSTLKDIADLVPL 172

Query: 797  APARLKILIEKCMPRFTEDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLIDLDVN 976
            AP+RL  ++ + MP     + ++M YVE +L LE   I + +G+ +L  ++D L+DLDV 
Sbjct: 173  APSRLVPIVIQRMPNVFTKEPLIMIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVE 232

Query: 977  IPWEDILQEEPNKGIFAIELGECNE-------DDEYTTIPNMDTLGLVKNTFADKLDGLM 1135
            I WE++LQ++ +KGIF +EL +  E       D       ++    L  N  A+KLD LM
Sbjct: 233  IAWEEVLQDDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLM 292

Query: 1136 LVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFA 1315
            ++  EHL+SC   G L+EVFE L   FQ  +L   KSKF QF+MFYAC+LDP+ CG++FA
Sbjct: 293  VLTFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFA 352

Query: 1316 IMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSW 1495
             +L D F+     P +RM A+AYLASYL+R KF+ +S VA+IL+RLV WC EYC++ D  
Sbjct: 353  RVLADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIHDGD 412

Query: 1496 VNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVC 1675
            +N   P+A +VFYSGCQA+MY+LCFR+RS+ +VP L+  L  LP+++IL HP L PLKVC
Sbjct: 413  IN---PKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHP-LSPLKVC 468

Query: 1676 LPLIVQEFLRQAQTARLF 1729
            LP IV+EFLRQA+ ARLF
Sbjct: 469  LPSIVEEFLRQAKAARLF 486


>gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]
          Length = 616

 Score =  400 bits (1028), Expect = e-109
 Identities = 227/497 (45%), Positives = 319/497 (64%), Gaps = 6/497 (1%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MGVEL+  +     ++D   +D +    V + +  V M  S       ++Y+ LV V++ 
Sbjct: 1    MGVELRNGEAGFHELDDADFTDYDLVYHVRDALTSVSMGDS-------DKYNELVAVMHH 53

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
               +  D+ AL+ T+LKALS AV  +D+V H SLL++IF  ++W+Y  D  +ALLELI +
Sbjct: 54   RGPLAPDEVALLVTSLKALSGAVSYIDSVLHESLLSSIFSMNMWNYRPDVMDALLELIIS 113

Query: 617  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 796
            LA     ++D+CL  L+ N  PP+       Q  R + RK++V   V+ +L  +  LVPL
Sbjct: 114  LAASNGTYIDSCLDMLVGNFTPPNYFTDMLKQP-RGIARKDQVLSRVHSSLKVLADLVPL 172

Query: 797  APARLKILIEKCMPRFTEDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLIDLDVN 976
            +P RL  +I +  P +   + +L+ YVE +L LE    G+ +GS +L+ +VDLL+DLDV 
Sbjct: 173  SPMRLLPIIIQRKPHYCSKEIILVIYVENMLKLESGIFGELVGSAMLSGLVDLLLDLDVE 232

Query: 977  IPWEDILQEEPNKGIFAIELGECNED--DEYTT---IPN-MDTLGLVKNTFADKLDGLML 1138
            I W+DILQ+E  KGIF++EL + +ED  DE      +P  +    LV N FA KLD LM+
Sbjct: 233  IGWDDILQDESAKGIFSMELEDVDEDIDDELMDGGELPRELSRKSLVGNLFARKLDSLMV 292

Query: 1139 VACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAI 1318
            +  EHL+SC     L+EVFE L + FQ+ +L  +KSKF+QF+MFYAC+LDP+ CG++FA 
Sbjct: 293  LIFEHLESCEVGRRLVEVFETLLQPFQKTVLTAYKSKFSQFVMFYACALDPENCGVRFAN 352

Query: 1319 MLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWV 1498
            ML D FIS    P  RM A+AYLASYL+R KF+ +SL+A  LKRLVDWC +YC +Q+   
Sbjct: 353  MLGDTFISNSHPPLLRMSAVAYLASYLSRGKFLSTSLIADTLKRLVDWCLDYCTIQE--- 409

Query: 1499 NKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCL 1678
             +I+P+A R+FYSGCQA+MY LCFR+RSI  VP  K  L  +P++ IL H  L PLKVCL
Sbjct: 410  GEINPKAHRIFYSGCQAIMYALCFRMRSIMGVPWFKSQLL-MPINLILSHK-LSPLKVCL 467

Query: 1679 PLIVQEFLRQAQTARLF 1729
            P IV EFLRQ++ A LF
Sbjct: 468  PSIVTEFLRQSKAAGLF 484


>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Vitis vinifera]
          Length = 636

 Score =  398 bits (1023), Expect = e-108
 Identities = 230/507 (45%), Positives = 319/507 (62%), Gaps = 16/507 (3%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MGVEL         +E+   SDSE       ++  VR A   VP  + + YD L+ V++ 
Sbjct: 1    MGVELATDRAGFHEMEEVNFSDSE-------LVYHVRHALQSVPLGDSDSYDQLIGVLHH 53

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
             +R+  D+ AL+ T+LKALS AV  +D V+H SLL++IF  S+W+YG D  +ALLELI +
Sbjct: 54   KERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILS 113

Query: 617  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 796
            LA     +LD  L  L+ N  PP  L   F +  R L RK++V   V+  L  I  LVPL
Sbjct: 114  LAASSGNYLDCSLDMLVSNFMPPYSL-LDFLKQPRGLARKDQVLSRVHSTLKDIADLVPL 172

Query: 797  APARLKILIEKCMPR-FTEDK--------YVLMTYVEGILGLERNEIGKFLGSTVLARVV 949
            AP+RL  ++ + MP  FT++         + +  YVE +L LE   I + +G+ +L  ++
Sbjct: 173  APSRLVPIVIQRMPNVFTKEPVSSICSTLFRIQIYVENMLRLEGGAIRELVGNMMLVALM 232

Query: 950  DLLIDLDVNIPWEDILQEEPNKGIFAIELGECNE-------DDEYTTIPNMDTLGLVKNT 1108
            D L+DLDV I WE++LQ++ +KGIF +EL +  E       D       ++    L  N 
Sbjct: 233  DRLVDLDVEIAWEEVLQDDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNL 292

Query: 1109 FADKLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLD 1288
             A+KLD LM++  EHL+SC   G L+EVFE L   FQ  +L   KSKF QF+MFYAC+LD
Sbjct: 293  IAEKLDSLMVLTFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALD 352

Query: 1289 PDTCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCF 1468
            P+ CG++FA +L D F+     P +RM A+AYLASYL+R KF+ +S VA+IL+RLV WC 
Sbjct: 353  PENCGVRFARVLADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCL 412

Query: 1469 EYCQLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHH 1648
            EYC++ D  +N   P+A +VFYSGCQA+MY+LCFR+RS+ +VP L+  L  LP+++IL H
Sbjct: 413  EYCKIHDGDIN---PKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKH 469

Query: 1649 PVLDPLKVCLPLIVQEFLRQAQTARLF 1729
            P L PLKVCLP IV+EFLRQA+ ARLF
Sbjct: 470  P-LSPLKVCLPSIVEEFLRQAKAARLF 495


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 625

 Score =  394 bits (1013), Expect = e-107
 Identities = 228/504 (45%), Positives = 319/504 (63%), Gaps = 13/504 (2%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MG EL+     +  +ED  L+D    A +++ I G   + SL    + + Y+ LV V++ 
Sbjct: 1    MGAELENNQAQLHAMEDVNLTD----AQLVDFIRGFLSSVSL---GDIDGYNQLVGVIHH 53

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
              R+  D+ AL+ T LKALS AV  +D + H SLL  IF  S+WDYG +  +AL+ELI +
Sbjct: 54   RDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIIS 113

Query: 617  LATVPDKFLDNCLYTLLHNLRPPSR----LKAPFNQSKRWLMRKEEVRREVYLALNCINT 784
            LA    K++D+CL  L++N  PP+     LK P       L RKEEV   V+ AL  I+ 
Sbjct: 114  LAVSNGKYVDSCLDMLVNNFMPPNSYMDLLKKPHG-----LTRKEEVLSRVHTALKDISD 168

Query: 785  LVPLAPARLKILIEKCMPRFTEDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLID 964
            LVPLAP RL+  +   M R   ++ +   YVE +L LE+  + +F+G  +L  +VD L+D
Sbjct: 169  LVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLD 228

Query: 965  LDVNIPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVK---------NTFAD 1117
            LDV I W+DILQ++ +KGIF +EL    +DD+ T   N D+  L +         N  A+
Sbjct: 229  LDVEIGWDDILQDDFSKGIFEMEL---EDDDDTTDDINEDSSELPRELSRRSLGGNVIAE 285

Query: 1118 KLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDT 1297
             LD L+++  EHL+SC   G L EVF+ L   FQR +L  +KSKF QF++FYACSLDP+ 
Sbjct: 286  TLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEV 345

Query: 1298 CGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYC 1477
            CG +FAI L D+F+S ++ P  RM A++YLAS+L+R KF+ +SLV +ILKRLVDWC EY 
Sbjct: 346  CGARFAISLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYG 405

Query: 1478 QLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVL 1657
            +  +   N   P+A +VFYSGCQA+MY+LCFR+RSI ++P+LK  L  +P+  +L H  L
Sbjct: 406  KTLNVDPN---PKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHR-L 461

Query: 1658 DPLKVCLPLIVQEFLRQAQTARLF 1729
             PLKVCLP IV+EFLRQA+ A LF
Sbjct: 462  SPLKVCLPSIVEEFLRQAKVANLF 485


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 626

 Score =  394 bits (1013), Expect = e-107
 Identities = 228/504 (45%), Positives = 319/504 (63%), Gaps = 13/504 (2%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MG EL+     +  +ED  L+D    A +++ I G   + SL    + + Y+ LV V++ 
Sbjct: 1    MGAELENNQAQLHAMEDVNLTD----AQLVDFIRGFLSSVSL---GDIDGYNQLVGVIHH 53

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
              R+  D+ AL+ T LKALS AV  +D + H SLL  IF  S+WDYG +  +AL+ELI +
Sbjct: 54   RDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIIS 113

Query: 617  LATVPDKFLDNCLYTLLHNLRPPSR----LKAPFNQSKRWLMRKEEVRREVYLALNCINT 784
            LA    K++D+CL  L++N  PP+     LK P       L RKEEV   V+ AL  I+ 
Sbjct: 114  LAVSNGKYVDSCLDMLVNNFMPPNSYMDLLKKPHG-----LTRKEEVLSRVHTALKDISD 168

Query: 785  LVPLAPARLKILIEKCMPRFTEDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLID 964
            LVPLAP RL+  +   M R   ++ +   YVE +L LE+  + +F+G  +L  +VD L+D
Sbjct: 169  LVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLD 228

Query: 965  LDVNIPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVK---------NTFAD 1117
            LDV I W+DILQ++ +KGIF +EL    +DD+ T   N D+  L +         N  A+
Sbjct: 229  LDVEIGWDDILQDDFSKGIFEMEL---EDDDDTTDDINEDSSELPRELSRRSLGGNVIAE 285

Query: 1118 KLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDT 1297
             LD L+++  EHL+SC   G L EVF+ L   FQR +L  +KSKF QF++FYACSLDP+ 
Sbjct: 286  TLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEV 345

Query: 1298 CGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYC 1477
            CG +FAI L D+F+S ++ P  RM A++YLAS+L+R KF+ +SLV +ILKRLVDWC EY 
Sbjct: 346  CGARFAISLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYG 405

Query: 1478 QLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVL 1657
            +  +   N   P+A +VFYSGCQA+MY+LCFR+RSI ++P+LK  L  +P+  +L H  L
Sbjct: 406  KTLNVDPN---PKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHR-L 461

Query: 1658 DPLKVCLPLIVQEFLRQAQTARLF 1729
             PLKVCLP IV+EFLRQA+ A LF
Sbjct: 462  SPLKVCLPSIVEEFLRQAKVANLF 485


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Glycine max]
            gi|571527491|ref|XP_006599254.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Glycine max]
          Length = 627

 Score =  392 bits (1006), Expect = e-106
 Identities = 222/484 (45%), Positives = 316/484 (65%), Gaps = 7/484 (1%)
 Frame = +2

Query: 299  VEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNPGKRIGQDDEALMAT 478
            +E+   SDS+    ++    GV +A   V   ++E YD LV  ++P K +  D+ A++ T
Sbjct: 15   MENDDFSDSQ----LVRHFRGVLVA---VTTGDRENYDELVGYLHPKKNLNPDEVAILVT 67

Query: 479  ALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITALATVPDKFLDNCLY 658
             LKALS AV  +D+V+H SLL  +   S+W+YG+D  +ALLELI +LA    K++D CL 
Sbjct: 68   TLKALSGAVSYIDSVHHESLLFAVSRMSLWNYGIDIMDALLELIISLAASNGKYIDWCLE 127

Query: 659  TLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPLAPARLKILIEKCMP 838
             L+ +  PP  L     Q +  + RK +V   V+ AL  I  LVPLAP RL  ++ + MP
Sbjct: 128  MLVKHFVPPFYLLDSLRQ-ENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMP 186

Query: 839  RFTEDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLIDLDVNIPWEDILQEEPNKG 1018
                 +  ++ YVE +L LE   IG+ +GS +L  +VD L++LDV I W+ ILQE+  KG
Sbjct: 187  SVFSKETEIVMYVENMLRLESGAIGETVGSIMLPALVDRLLELDVEIGWDGILQEDA-KG 245

Query: 1019 IFAIELGE----CNEDDEYTTIPNMDTLG---LVKNTFADKLDGLMLVACEHLKSCSESG 1177
            IF +EL +     +ED+   ++P  + L    L  N   +KLD LM++A  HL+SC  SG
Sbjct: 246  IFEMELEDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQSSG 305

Query: 1178 HLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDIFISKDEDP 1357
             L EVF+ L   FQR +L  +KSKFTQ++MFYAC+LDP+ CG+KFA++L D+F      P
Sbjct: 306  RLTEVFDTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNPP 365

Query: 1358 DSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISPQADRVFYS 1537
             +RM A AYLASYL RAKF+ ++LV +I++ LVDWC+ YC+L+D  +N   P+A +VFYS
Sbjct: 366  ITRMSAAAYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLRDFDMN---PRAHQVFYS 422

Query: 1538 GCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQEFLRQAQT 1717
            GCQA+MYILCFR+RS+ D+P+LK  L ++P+++IL H  L PLKVCLP +V EFLRQA+ 
Sbjct: 423  GCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHK-LSPLKVCLPTVVVEFLRQAKA 481

Query: 1718 ARLF 1729
            A+LF
Sbjct: 482  AQLF 485


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Glycine max]
          Length = 628

 Score =  391 bits (1005), Expect = e-106
 Identities = 221/486 (45%), Positives = 314/486 (64%), Gaps = 14/486 (2%)
 Frame = +2

Query: 314  LSDSEAFASVIN-------VINGVRMAPSLVPQSNKEQYDYLVTVVNPGKRIGQDDEALM 472
            +SD E F+ + N       +++  R     V   ++E YD LV  ++P K +  D+ A++
Sbjct: 6    VSDKEEFSQMENNDFSDSQLVHHFRGVLVAVTTGDRENYDELVGYLHPKKHLNPDEVAIL 65

Query: 473  ATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITALATVPDKFLDNC 652
             T LKALS AV  +D+V+H SLL  +   S+W+ G+D  +ALLELI +LA    K++D C
Sbjct: 66   VTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNCGIDIMDALLELIISLAVSNGKYIDWC 125

Query: 653  LYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPLAPARLKILIEKC 832
            L  L+ N  PP  L     Q +  + RK +V   V+ AL  I  LVPLAP RL  ++ + 
Sbjct: 126  LEMLVKNFVPPFYLLDSLRQ-ENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQK 184

Query: 833  MPRFTEDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLIDLDVNIPWEDILQEEPN 1012
            MP     +  ++ YVE +L LE   +G+ +GST+L  +VD L++LDV I W+ ILQE+  
Sbjct: 185  MPSVFSKETEIVMYVENMLRLESGALGETVGSTMLPALVDRLLELDVEIGWDGILQEDA- 243

Query: 1013 KGIFAIELGEC----NEDDEYTTIPNMDTLG---LVKNTFADKLDGLMLVACEHLKSCSE 1171
            KGIF +EL +     +ED+   ++ + + L    L  N   +KLD LM++A  HL+SC  
Sbjct: 244  KGIFEMELEDVTEFTDEDENCDSMLSSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQN 303

Query: 1172 SGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDIFISKDE 1351
            SG L EVF  L   FQR +L  +KSKFTQF+MFYAC+LDP+ CG+KFA++L D+F     
Sbjct: 304  SGRLAEVFNTLLASFQRTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLADMFGGDAN 363

Query: 1352 DPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISPQADRVF 1531
             P +RM A+AYLASYL RAKF+ ++LV SI++ LVDWC+ YC+ +D  +N   P+A +VF
Sbjct: 364  PPITRMSAVAYLASYLTRAKFLSAALVTSIIQSLVDWCYAYCKFRDFDMN---PRAHQVF 420

Query: 1532 YSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQEFLRQA 1711
            YSGCQA+MYI+CFR+RS+ DVP+LK  L ++P+++IL H  L PLKVCLP +V EFLRQA
Sbjct: 421  YSGCQAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILKHK-LSPLKVCLPTVVVEFLRQA 479

Query: 1712 QTARLF 1729
            + A+LF
Sbjct: 480  KAAQLF 485


>gb|EOX90600.1| Major facilitator superfamily protein isoform 1 [Theobroma cacao]
            gi|508698705|gb|EOX90601.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508698706|gb|EOX90602.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 628

 Score =  391 bits (1004), Expect = e-106
 Identities = 222/499 (44%), Positives = 315/499 (63%), Gaps = 8/499 (1%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MG+EL  Y     + ED +++ +++      +++ V+ A + V   +   Y+ LV V++ 
Sbjct: 1    MGLELPKYP---EMEEDNFVNFTDS-----EIVSHVKDALTSVLSGDSNSYNQLVAVMHH 52

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
             KR+  D+ AL+ T LKAL  AV  +D   H SLL+ IF  S+W+YG    +AL ELI +
Sbjct: 53   SKRLAPDEVALLETTLKALGGAVSCIDTTLHDSLLSAIFSMSMWNYGPHVADALAELIVS 112

Query: 617  LATVPDKFLDNCLYTLLHNLRPP----SRLKAPFNQSKRWLMRKEEVRREVYLALNCINT 784
            LA    K+LD CL  L+ N  PP     +LK P     R L RK +V   V+ A   I+ 
Sbjct: 113  LAISNGKYLDLCLGMLVSNFTPPPYFLDKLKLP-----RGLERKGQVLSLVHAAFKKISD 167

Query: 785  LVPLAPARLKILIEKCMPRFTEDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLID 964
             +PLAP RL  ++ + MP        ++ YVE +L LE  EIG+ +GST+L  VVD LI+
Sbjct: 168  YIPLAPLRLSNIVLQGMPTIYHKDRAIVIYVENMLKLESGEIGELVGSTMLMAVVDQLIE 227

Query: 965  LDVNIPWEDILQEEPNKGIFAIELGECNEDDEY----TTIPNMDTLGLVKNTFADKLDGL 1132
            LD+ I W+ ILQ++ +KGIF +EL + +E +E     T    +    L  N+ A+ LD L
Sbjct: 228  LDLEIGWDAILQDDFSKGIFEMELEDVDEVEESAEQDTGEFRLSRKSLAGNSIAELLDNL 287

Query: 1133 MLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKF 1312
            +++  EHL+SC  +G L +VFE L + FQ  ++  +KSKFTQF+MFYAC+LDPD CG++F
Sbjct: 288  LVLTFEHLESCERAGRLAKVFETLLQSFQITVMSAYKSKFTQFVMFYACALDPDYCGMRF 347

Query: 1313 AIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDS 1492
            A ML D+F+        RM A+AYLASYL+RAKF+ +SL++S+LKRLVDWC EY +  D 
Sbjct: 348  ATMLADLFVQDSHPQPIRMSAVAYLASYLSRAKFLSASLISSMLKRLVDWCLEYGKTPDG 407

Query: 1493 WVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKV 1672
             +N   P A RVFYSGCQA+MY+LCFR++   DVP+LK  L  +P++ IL H  L+PLKV
Sbjct: 408  DIN---PNAHRVFYSGCQAIMYVLCFRMKVFMDVPRLKMQLL-MPMEQILKHK-LNPLKV 462

Query: 1673 CLPLIVQEFLRQAQTARLF 1729
            CLP +V+EFLRQ++ A LF
Sbjct: 463  CLPSVVEEFLRQSKAACLF 481


>ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  387 bits (995), Expect = e-105
 Identities = 226/505 (44%), Positives = 318/505 (62%), Gaps = 14/505 (2%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MGVEL         +ED  +SD E       ++  VR A + V   + + Y+ LV V++ 
Sbjct: 1    MGVELPIDHAESHEMEDVNISDLE-------LVYHVREALTSVQSGDNDNYNQLVAVMHL 53

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
              R+  D+ AL+ T+LKALS AV  +D  +H SLL +IF  S+W+Y  D  +AL  LI +
Sbjct: 54   SGRLDPDNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDVMDALKGLIIS 113

Query: 617  LATVPDKFLDNCLYTLLHNLRPPS----RLKAPFNQSKRWLMRKEEVRREVYLALNCINT 784
            LA    K++D+CL  L+ N  PPS    +LK P       L RK +V   V+ AL  I  
Sbjct: 114  LAASNGKYVDSCLTMLVSNFTPPSYFLDKLKEPHG-----LERKHQVLSRVHAALKSIFD 168

Query: 785  LVPLAPARLKILIEKCMPRFT---EDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDL 955
            LVPLAP RL  ++ + MP      E   +++ Y E +L LE + +G+ + ST+L  VVD 
Sbjct: 169  LVPLAPTRLLPIVVQRMPTVHNKHERLKMIVVYTENMLKLESSAMGELVRSTLLMAVVDR 228

Query: 956  LIDLDVNIPWEDILQEEPNKGIFAIELGECNE--DDEYTT---IPN--MDTLGLVKNTFA 1114
            LIDLD+ I W+DIL ++ +KGIF +EL +  E  DD       +P+  +    L  N  A
Sbjct: 229  LIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSLSRKSLSGNLIA 288

Query: 1115 DKLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPD 1294
            + LD LM++  EHL+SC  +G L+EVFE L + FQ  +L  +KSKF QF+MFYAC+LDP+
Sbjct: 289  ELLDSLMVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPE 348

Query: 1295 TCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEY 1474
             CGL+FA ML D+F+S    P +RM A++YLAS+L+RA+F+    + S+LKRLVDWC EY
Sbjct: 349  NCGLRFATMLADVFVSGLYPPLTRMSAVSYLASFLSRARFLSPCFIVSLLKRLVDWCLEY 408

Query: 1475 CQLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPV 1654
            C +    +N   P+A RVFYSGCQA+MY+LCFR+RSI D+P+LK  L  +P++++L H  
Sbjct: 409  CNILGGDIN---PKAHRVFYSGCQAIMYVLCFRMRSIMDIPRLKSQLLLMPLETVLKHD- 464

Query: 1655 LDPLKVCLPLIVQEFLRQAQTARLF 1729
            L+PLKVCLP +V EFL+Q++ ARLF
Sbjct: 465  LNPLKVCLPSVVSEFLQQSKAARLF 489


>ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis]
            gi|223536316|gb|EEF37967.1| transcription initiation
            factor ia, putative [Ricinus communis]
          Length = 640

 Score =  387 bits (995), Expect = e-105
 Identities = 238/515 (46%), Positives = 320/515 (62%), Gaps = 24/515 (4%)
 Frame = +2

Query: 257  MGVELQG-YDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVN 433
            MGVEL   Y   +  +ED  ++ +++     +++  VR A   V   +   YD LV V++
Sbjct: 1    MGVELDSQYKKEIEDMEDDGVNYTDS-----DLVYHVRDALHSVQYGDTNSYDQLVGVMH 55

Query: 434  PGKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELIT 613
              +R+  DD AL+ T+LKALS AV  +D  +H  LL +IF  SIW+YG D   ALLELI 
Sbjct: 56   HSQRLTPDDVALLLTSLKALSGAVSYIDECHHDRLLQSIFGMSIWNYGPDVMEALLELII 115

Query: 614  ALATVPDKFLDNCLYTLLHNLRPP----SRLKAPFNQSKRWLMRKEEVRREVYLALNCIN 781
            ALA    K++D CL  L+ N  PP      LK P  Q+K     KE+V   ++ AL  I 
Sbjct: 116  ALAASNGKYIDPCLKMLVTNFVPPMYLIDILKLPRGQAK-----KEQVLSRLHTALEDIA 170

Query: 782  TLVPLAPARLKI----LIEKCMPRFTED--------KYVLMTYVEGILGLERNEIGKFLG 925
             L+P+A +RL       I++    F +D        KY    YVE +L LE   I +F+G
Sbjct: 171  HLIPMAASRLSTEVVSEIQRIPTTFKKDQYHEKDRVKYRTEIYVENMLRLESGAIREFVG 230

Query: 926  STVLARVVDLLIDLDVNIPWEDILQEEPNKGIFAIEL---GECNEDDEYT---TIP-NMD 1084
            S +L  VVD LIDLDV I W+DIL+++  KGIFAIEL    E ++DDEY     +P  + 
Sbjct: 231  SRMLMAVVDKLIDLDVAIGWDDILRDDSCKGIFAIELEDADEVSDDDEYNDYGELPRTLS 290

Query: 1085 TLGLVKNTFADKLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFL 1264
               L +N  AD LD LM+   EHL+ C+ +  L +VFE L + F   +L  +KSKF QF+
Sbjct: 291  HKSLGENVAADLLDSLMVRIFEHLELCANNKRLNDVFETLLDSFMLTILNTYKSKFAQFV 350

Query: 1265 MFYACSLDPDTCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASIL 1444
            MFYAC+LDP+ CG++FA  L D F +  E+P +RM A+AYLASYLARAKF+P + VAS L
Sbjct: 351  MFYACALDPENCGVEFAERLRDRF-TYGENPLTRMSAVAYLASYLARAKFLPIAFVASTL 409

Query: 1445 KRLVDWCFEYCQLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHL 1624
            KRLVDWC EYC+ QD  +N   P+A RVFYSGCQA++Y+LCFR+ S+ D+P LK  L H+
Sbjct: 410  KRLVDWCSEYCRNQDGDMN---PKAHRVFYSGCQAILYVLCFRMSSMMDIPWLKSQLLHM 466

Query: 1625 PVDSILHHPVLDPLKVCLPLIVQEFLRQAQTARLF 1729
            P++ I+ H  L PLKVCLP IV+EFL+QA+ A LF
Sbjct: 467  PLEQIMKHK-LGPLKVCLPSIVEEFLKQAKAAHLF 500


>ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X3 [Citrus sinensis]
          Length = 534

 Score =  385 bits (990), Expect = e-104
 Identities = 225/505 (44%), Positives = 318/505 (62%), Gaps = 14/505 (2%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MG+EL         +ED  +SD E       ++  VR A + V   + + Y+ LV V++ 
Sbjct: 1    MGMELPKDHAESHEMEDVNISDLE-------LVYHVREALTSVQSGDNDNYNQLVAVMHL 53

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
              R+  D+ AL+ T+LKALS AV  +D  +H SLL +IF  S+W+Y  D  +AL  LI +
Sbjct: 54   SGRLDPDNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDIMDALKGLIIS 113

Query: 617  LATVPDKFLDNCLYTLLHNLRPPS----RLKAPFNQSKRWLMRKEEVRREVYLALNCINT 784
            LA    K++D+CL  L+ N  PPS    +LK P       L RK +V   V+ AL  I  
Sbjct: 114  LAASSGKYVDSCLTMLVGNFTPPSYFLDKLKEPHG-----LERKHQVLSRVHAALKSIFD 168

Query: 785  LVPLAPARLKILIEKCMPRFT---EDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDL 955
            LVPLAP RL  ++ + MP      E   +++ Y E +L LE + +G+ + ST+L  VVD 
Sbjct: 169  LVPLAPMRLLPIVVQRMPTVHNKHERLKLIVVYTENMLKLESSAMGELVRSTLLMAVVDR 228

Query: 956  LIDLDVNIPWEDILQEEPNKGIFAIELGECNE--DDEYTT---IPN--MDTLGLVKNTFA 1114
            LIDLD+ I W+DIL ++ +KGIF +EL +  E  DD       +P+  +    L  N  A
Sbjct: 229  LIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSISRKSLSGNLIA 288

Query: 1115 DKLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPD 1294
            + LD L+++  EHL+SC  +G L+EVFE L + FQ  +L  +KSKF QF+MFYAC+LDP+
Sbjct: 289  ELLDSLLVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPE 348

Query: 1295 TCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEY 1474
             CGL+FA ML D+F+S    P +RM +++YLASYL+RA+F+    + S+LKRLVDWC EY
Sbjct: 349  NCGLRFATMLADVFVSGLYPPLTRMSSVSYLASYLSRARFLSPCFIVSLLKRLVDWCLEY 408

Query: 1475 CQLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPV 1654
            C +       I+P+A RVFYSGCQA+MY+LCFR+RSI DVP+LK  L  +P++++L H  
Sbjct: 409  CNIPG---GNINPKAHRVFYSGCQAIMYVLCFRMRSIMDVPRLKSQLLLMPLETVLKHN- 464

Query: 1655 LDPLKVCLPLIVQEFLRQAQTARLF 1729
            L+PLKVCLP +V EFL+Q++ ARLF
Sbjct: 465  LNPLKVCLPSVVSEFLQQSKAARLF 489


>ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  385 bits (990), Expect = e-104
 Identities = 225/505 (44%), Positives = 318/505 (62%), Gaps = 14/505 (2%)
 Frame = +2

Query: 257  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 436
            MG+EL         +ED  +SD E       ++  VR A + V   + + Y+ LV V++ 
Sbjct: 1    MGMELPKDHAESHEMEDVNISDLE-------LVYHVREALTSVQSGDNDNYNQLVAVMHL 53

Query: 437  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITA 616
              R+  D+ AL+ T+LKALS AV  +D  +H SLL +IF  S+W+Y  D  +AL  LI +
Sbjct: 54   SGRLDPDNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDIMDALKGLIIS 113

Query: 617  LATVPDKFLDNCLYTLLHNLRPPS----RLKAPFNQSKRWLMRKEEVRREVYLALNCINT 784
            LA    K++D+CL  L+ N  PPS    +LK P       L RK +V   V+ AL  I  
Sbjct: 114  LAASSGKYVDSCLTMLVGNFTPPSYFLDKLKEPHG-----LERKHQVLSRVHAALKSIFD 168

Query: 785  LVPLAPARLKILIEKCMPRFT---EDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDL 955
            LVPLAP RL  ++ + MP      E   +++ Y E +L LE + +G+ + ST+L  VVD 
Sbjct: 169  LVPLAPMRLLPIVVQRMPTVHNKHERLKLIVVYTENMLKLESSAMGELVRSTLLMAVVDR 228

Query: 956  LIDLDVNIPWEDILQEEPNKGIFAIELGECNE--DDEYTT---IPN--MDTLGLVKNTFA 1114
            LIDLD+ I W+DIL ++ +KGIF +EL +  E  DD       +P+  +    L  N  A
Sbjct: 229  LIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSISRKSLSGNLIA 288

Query: 1115 DKLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPD 1294
            + LD L+++  EHL+SC  +G L+EVFE L + FQ  +L  +KSKF QF+MFYAC+LDP+
Sbjct: 289  ELLDSLLVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPE 348

Query: 1295 TCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEY 1474
             CGL+FA ML D+F+S    P +RM +++YLASYL+RA+F+    + S+LKRLVDWC EY
Sbjct: 349  NCGLRFATMLADVFVSGLYPPLTRMSSVSYLASYLSRARFLSPCFIVSLLKRLVDWCLEY 408

Query: 1475 CQLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPV 1654
            C +       I+P+A RVFYSGCQA+MY+LCFR+RSI DVP+LK  L  +P++++L H  
Sbjct: 409  CNIPG---GNINPKAHRVFYSGCQAIMYVLCFRMRSIMDVPRLKSQLLLMPLETVLKHN- 464

Query: 1655 LDPLKVCLPLIVQEFLRQAQTARLF 1729
            L+PLKVCLP +V EFL+Q++ ARLF
Sbjct: 465  LNPLKVCLPSVVSEFLQQSKAARLF 489