BLASTX nr result

ID: Zingiber24_contig00023108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00023108
         (380 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ28239.1| hypothetical protein PRUPE_ppa000191mg [Prunus pe...    77   2e-12
ref|XP_002526002.1| protein with unknown function [Ricinus commu...    77   3e-12
gb|EXB32524.1| Nuclear pore complex protein [Morus notabilis]          69   5e-10
ref|XP_006416964.1| hypothetical protein EUTSA_v10006562mg [Eutr...    65   9e-09

>gb|EMJ28239.1| hypothetical protein PRUPE_ppa000191mg [Prunus persica]
          Length = 1490

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 50/125 (40%), Positives = 61/125 (48%)
 Frame = +3

Query: 3    ALSRGGVAEACSVVKRVGSNIYTGVEGRLSLEIIYLHLEMAASVKFVFSPQLFFIKVQLF 182
            ALSRGG+AEACSV+KRVGS+IY G    L L+ + LHLE AA  +               
Sbjct: 1300 ALSRGGIAEACSVLKRVGSHIYPGDGAGLPLDTLCLHLEKAALERLE------------- 1346

Query: 183  C*YLYIY*FSVLLV*QCMNILQTGXXXXXXXXXXXCKVEPKPALSTYDQLLSYGAILPSP 362
                               +   G           CK   +P L+TYDQLL+ GAILPSP
Sbjct: 1347 -----------------SGVESVGDEDVARALLAACKGAIEPVLNTYDQLLTSGAILPSP 1389

Query: 363  NLKLR 377
            NL+LR
Sbjct: 1390 NLRLR 1394


>ref|XP_002526002.1| protein with unknown function [Ricinus communis]
            gi|223534734|gb|EEF36426.1| protein with unknown function
            [Ricinus communis]
          Length = 1490

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 50/125 (40%), Positives = 60/125 (48%)
 Frame = +3

Query: 3    ALSRGGVAEACSVVKRVGSNIYTGVEGRLSLEIIYLHLEMAASVKFVFSPQLFFIKVQLF 182
            ALSRGG+AEACSV+KRVGS+IY G    L L+ + LHLE AA  +     +         
Sbjct: 1300 ALSRGGIAEACSVLKRVGSHIYPGDGAILPLDTLCLHLEKAALERLESGAE--------- 1350

Query: 183  C*YLYIY*FSVLLV*QCMNILQTGXXXXXXXXXXXCKVEPKPALSTYDQLLSYGAILPSP 362
                                   G           CK   +P L+ YDQLLS GAILPSP
Sbjct: 1351 ---------------------PVGDEDVARALLAACKGATEPVLNAYDQLLSNGAILPSP 1389

Query: 363  NLKLR 377
            NL+LR
Sbjct: 1390 NLRLR 1394


>gb|EXB32524.1| Nuclear pore complex protein [Morus notabilis]
          Length = 1564

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 47/125 (37%), Positives = 57/125 (45%)
 Frame = +3

Query: 3    ALSRGGVAEACSVVKRVGSNIYTGVEGRLSLEIIYLHLEMAASVKFVFSPQLFFIKVQLF 182
            ALSRGG+AEACSV+KRVGS+IY G    L L+ + LHLE AA  +               
Sbjct: 1374 ALSRGGIAEACSVLKRVGSHIYPGDGAGLPLDTLCLHLEKAALERLE------------- 1420

Query: 183  C*YLYIY*FSVLLV*QCMNILQTGXXXXXXXXXXXCKVEPKPALSTYDQLLSYGAILPSP 362
                               +               CK   +P L+TYDQLLS GAI PS 
Sbjct: 1421 -----------------SGVESVRDEDVPRALLAACKGATEPVLNTYDQLLSSGAIFPSA 1463

Query: 363  NLKLR 377
             L+LR
Sbjct: 1464 KLRLR 1468


>ref|XP_006416964.1| hypothetical protein EUTSA_v10006562mg [Eutrema salsugineum]
            gi|557094735|gb|ESQ35317.1| hypothetical protein
            EUTSA_v10006562mg [Eutrema salsugineum]
          Length = 1456

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 44/125 (35%), Positives = 59/125 (47%)
 Frame = +3

Query: 3    ALSRGGVAEACSVVKRVGSNIYTGVEGRLSLEIIYLHLEMAASVKFVFSPQLFFIKVQLF 182
            ALS+GG+AEACSV+KRVGS IY G    L L+++ LHLE AA  +   +  +        
Sbjct: 1270 ALSQGGIAEACSVLKRVGSQIYPGDGAVLPLDVLCLHLEKAALERSERNEIV-------- 1321

Query: 183  C*YLYIY*FSVLLV*QCMNILQTGXXXXXXXXXXXCKVEPKPALSTYDQLLSYGAILPSP 362
                                   G           CK   +P L+ YD+LLS  AI+ SP
Sbjct: 1322 -----------------------GDEDIARALLAACKGAAEPVLNAYDRLLSNAAIVSSP 1358

Query: 363  NLKLR 377
            NL++R
Sbjct: 1359 NLRIR 1363


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