BLASTX nr result
ID: Zingiber24_contig00022559
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00022559
(787 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262... 110 6e-22
ref|XP_006380036.1| hypothetical protein POPTR_0008s20120g [Popu... 102 2e-19
ref|XP_002516840.1| serine/arginine rich splicing factor, putati... 102 2e-19
gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transc... 97 8e-18
gb|EMJ28739.1| hypothetical protein PRUPE_ppa010343mg [Prunus pe... 93 9e-17
ref|XP_004984295.1| PREDICTED: serine/arginine-rich splicing fac... 93 1e-16
ref|XP_006650106.1| PREDICTED: serine/arginine-rich splicing fac... 91 6e-16
gb|ESW26205.1| hypothetical protein PHAVU_003G099500g [Phaseolus... 91 6e-16
gb|EPS63010.1| hypothetical protein M569_11776, partial [Genlise... 90 1e-15
ref|XP_004508323.1| PREDICTED: serine/arginine-rich splicing fac... 89 1e-15
gb|EMJ28740.1| hypothetical protein PRUPE_ppa010343mg [Prunus pe... 89 1e-15
gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japo... 89 2e-15
gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indi... 89 2e-15
ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group] g... 89 2e-15
ref|XP_003557895.1| PREDICTED: uncharacterized protein LOC100829... 88 3e-15
ref|XP_002314444.2| SC35-like splicing factor family protein [Po... 88 3e-15
gb|EOY06353.1| SC35-like splicing factor 28 isoform 2 [Theobroma... 88 4e-15
gb|ACG43943.1| FUS-interacting serine-arginine-rich protein 1 [Z... 86 2e-14
ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216... 85 3e-14
gb|AGE46131.1| arginine/serine-rich splicing factor SCL28 transc... 84 7e-14
>ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
gi|298205010|emb|CBI34317.3| unnamed protein product
[Vitis vinifera]
Length = 287
Score = 110 bits (275), Expect = 6e-22
Identities = 61/113 (53%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRHRRSLSRSPRQRHRSYSHSPTP-RHD 177
GGREI+IV+AEENRKTPQEMR +R+S RH G RRS RSPR+R+RSYS SP+P RHD
Sbjct: 111 GGREIAIVFAEENRKTPQEMRTNSRVSGRHGGSYRRRSPPRSPRRRYRSYSRSPSPVRHD 170
Query: 178 SRDNGRGGRDYYXXXXXXXXXXLNGRDYGSPDDRDHRSKRSERQSPGPEVNEQ 336
SRD RGGRDYY S RD + RS S P N+Q
Sbjct: 171 SRDRDRGGRDYYSPSRSRSVSR-------SVSPRDDKHYRSNHNSKSPRQNDQ 216
>ref|XP_006380036.1| hypothetical protein POPTR_0008s20120g [Populus trichocarpa]
gi|550333516|gb|ERP57833.1| hypothetical protein
POPTR_0008s20120g [Populus trichocarpa]
Length = 246
Score = 102 bits (253), Expect = 2e-19
Identities = 62/122 (50%), Positives = 71/122 (58%), Gaps = 22/122 (18%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRHRRSLSRSPRQRHRSYSHSPTP-RHD 177
GGREI IV+AEENRKTPQEMR+ T +S+RH G R+ SRSPR RHRSYS SP+P RHD
Sbjct: 115 GGREIRIVFAEENRKTPQEMRRTTHVSDRHGGSSRGRTSSRSPRHRHRSYSRSPSPARHD 174
Query: 178 SRDNG--------------------RGGRDYYXXXXXXXXXXLNGRDYG-SPDDRDHRSK 294
SRD G R GRDY L+ R+ G SP +RDH S
Sbjct: 175 SRDRGVKDDYRSRRRSRSISHSRSPRDGRDY-----RADQQSLSPRENGQSPGERDHASG 229
Query: 295 RS 300
RS
Sbjct: 230 RS 231
>ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich
splicing factor, putative [Ricinus communis]
Length = 257
Score = 102 bits (253), Expect = 2e-19
Identities = 59/113 (52%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRHRRSLSRSPRQRHRSYSHSP-TPRHD 177
GGREI IVYAEENRKTPQEMR R+S RH G R+ +SPR+RHRSYSHSP + RHD
Sbjct: 119 GGREIRIVYAEENRKTPQEMRTTARVSGRHGGSTRGRTPPKSPRRRHRSYSHSPSSARHD 178
Query: 178 SRDNGRGGRDYYXXXXXXXXXXLNGRDYGSPDDRDHRSKRSERQSPGPEVNEQ 336
SRD RG +D Y R D+RD+ RS ++SP P N+Q
Sbjct: 179 SRD--RGAKDDYHSPRRSRSI---SRSRSPQDERDY---RSNQRSPSPRENDQ 223
>gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 96.7 bits (239), Expect = 8e-18
Identities = 61/107 (57%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRH-RRSLSRSPRQRHRSYSHSPTP-RH 174
GGREISIVYAEENRKTPQEMR+ TR S R++ GR+ RRSLSRSPR R SYS SP+P R
Sbjct: 124 GGREISIVYAEENRKTPQEMRRRTRTSGRYMEGRYTRRSLSRSPRSRSHSYSPSPSPVRR 183
Query: 175 DSRDNGRGGRDYYXXXXXXXXXXLNGRDYGSPDDRDHRSKRSERQSP 315
D R GRG RD Y SP RD+R RS+ SP
Sbjct: 184 DFR--GRGHRDDYSPEYSH-----------SPRPRDNRRYRSDSSSP 217
>gb|EMJ28739.1| hypothetical protein PRUPE_ppa010343mg [Prunus persica]
Length = 252
Score = 93.2 bits (230), Expect = 9e-17
Identities = 59/110 (53%), Positives = 70/110 (63%), Gaps = 8/110 (7%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRHRRSLSRSPRQRHRSYSHSPTP-RHD 177
GGREI IV+AEENRKTPQEMR TR+S R+ G RR+ RSPR+++RSYS SP+P R D
Sbjct: 117 GGREIRIVFAEENRKTPQEMRTTTRVSGRYGGSSRRRTPPRSPRRQYRSYSRSPSPVRRD 176
Query: 178 SRDNGRGGRDYY-----XXXXXXXXXXLNGRDY-GSPDDRDH-RSKRSER 306
SRD RG RD Y +GRDY SP R++ RS R ER
Sbjct: 177 SRD--RGARDDYRSPVQSRSISRSPSPRDGRDYRRSPSPRENGRSPRDER 224
>ref|XP_004984295.1| PREDICTED: serine/arginine-rich splicing factor 33-like isoform X1
[Setaria italica]
Length = 242
Score = 92.8 bits (229), Expect = 1e-16
Identities = 59/110 (53%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRH-RRSLSRSPRQRHRSYSHSPTP-RH 174
GG+EISIVYAEENRKTPQEMR TRIS R++ GR RRSLSRSPR R S+S SP+P RH
Sbjct: 124 GGQEISIVYAEENRKTPQEMRMRTRISGRYMDGRFTRRSLSRSPRSRSHSHSPSPSPLRH 183
Query: 175 DSRDNGRGGRDYYXXXXXXXXXXLNGRDYGSPDDRDHRSKRSERQSPGPE 324
R GR RD Y SP R +R +RS +SP P+
Sbjct: 184 HFR--GRDHRDNYSPGGSC-----------SPRPRANRHRRSHSRSPSPD 220
>ref|XP_006650106.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Oryza
brachyantha]
Length = 123
Score = 90.5 bits (223), Expect = 6e-16
Identities = 58/110 (52%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRH-RRSLSRSPRQRHRSYSHSPTP-RH 174
GGREISIV+AEENRKTPQEMR TR S R++ G H RRS+SRSPR R+ SYS SP+P R
Sbjct: 7 GGREISIVFAEENRKTPQEMRMRTRTSGRYMDGSHRRRSVSRSPRSRYHSYSPSPSPARR 66
Query: 175 DSRDNGRGGRDYYXXXXXXXXXXLNGRDYGSPDDRDHRSKRSERQSPGPE 324
D RD RD Y G Y SP +D R RS +S P+
Sbjct: 67 DYRDQ----RDDYSP----------GESY-SPHAQDKRHNRSNGRSASPD 101
>gb|ESW26205.1| hypothetical protein PHAVU_003G099500g [Phaseolus vulgaris]
Length = 254
Score = 90.5 bits (223), Expect = 6e-16
Identities = 57/119 (47%), Positives = 69/119 (57%), Gaps = 14/119 (11%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRHRRSLSRSPRQRHRSYSHSPTPRHDS 180
GGREI IV+AEENRKTPQEMR +R S RH GGR RR+ SRSP++R+RSYS SP+P D
Sbjct: 120 GGREIRIVFAEENRKTPQEMRVSSRGSSRHGGGR-RRNRSRSPQRRYRSYSRSPSPARDD 178
Query: 181 RDNGRGGRDYY----XXXXXXXXXXLNGRDY----------GSPDDRDHRSKRSERQSP 315
+ RG DYY G+DY SPDD+ ++ S QSP
Sbjct: 179 SRDDRGRDDYYSPERSRSYSRSLSPSGGKDYKKSPRPRENGRSPDDKKGQTP-SRSQSP 236
>gb|EPS63010.1| hypothetical protein M569_11776, partial [Genlisea aurea]
Length = 228
Score = 89.7 bits (221), Expect = 1e-15
Identities = 55/105 (52%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRHRRSLSRSPRQRHRSYSHSPTPRHDS 180
GGREI IV+AEENRKTPQEMR++TRIS R G RRS S SPR RH S S SP+PRH+S
Sbjct: 104 GGREIRIVFAEENRKTPQEMRRVTRISSR--GSYRRRSPSGSPRHRHHSSSRSPSPRHES 161
Query: 181 RDNGRGGRDYYXXXXXXXXXXLNGRDYGSPDDRDHRSK-RSERQS 312
R +G G R DDR+H S+ RS R+S
Sbjct: 162 RAHGDKG---------SHRPRSASRSASPRDDRNHGSRGRSNRRS 197
>ref|XP_004508323.1| PREDICTED: serine/arginine-rich splicing factor 33-like isoform X1
[Cicer arietinum]
Length = 251
Score = 89.4 bits (220), Expect = 1e-15
Identities = 55/112 (49%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRHRRSLSRSPRQRHRSYSHSPTP-RHD 177
GGREI IV+AEENRKTPQEMR +R S R GG RR+ SRSPR+R+RSYS SP+P R D
Sbjct: 114 GGREIRIVFAEENRKTPQEMRVTSRGSGRSGGGSRRRARSRSPRRRYRSYSRSPSPARAD 173
Query: 178 SRDNGRGGRDYYXXXXXXXXXXLN---GRDYGSPDDRDHRSKRSERQSPGPE 324
SRD+ R DY ++ G+DY RS RS+ P+
Sbjct: 174 SRDDRRKDDDYSPERSRSYSRSVSPGGGKDY-------RRSPRSKENGRSPD 218
>gb|EMJ28740.1| hypothetical protein PRUPE_ppa010343mg [Prunus persica]
Length = 253
Score = 89.4 bits (220), Expect = 1e-15
Identities = 59/111 (53%), Positives = 70/111 (63%), Gaps = 9/111 (8%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISE-RHVGGRHRRSLSRSPRQRHRSYSHSPTP-RH 174
GGREI IV+AEENRKTPQEMR TR+S R+ G RR+ RSPR+++RSYS SP+P R
Sbjct: 117 GGREIRIVFAEENRKTPQEMRTTTRVSSGRYGGSSRRRTPPRSPRRQYRSYSRSPSPVRR 176
Query: 175 DSRDNGRGGRDYY-----XXXXXXXXXXLNGRDY-GSPDDRDH-RSKRSER 306
DSRD RG RD Y +GRDY SP R++ RS R ER
Sbjct: 177 DSRD--RGARDDYRSPVQSRSISRSPSPRDGRDYRRSPSPRENGRSPRDER 225
>gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 89.0 bits (219), Expect = 2e-15
Identities = 57/114 (50%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRH-RRSLSRSPRQRHRSYSHSPTP-RH 174
GGREISIV+AEENRKTPQEMR TR S R++ G H RRS+SRSPR R+ SYS SP+P R
Sbjct: 128 GGREISIVFAEENRKTPQEMRMRTRTSGRYMDGSHRRRSVSRSPRSRYHSYSPSPSPARR 187
Query: 175 DSRDNGRGGRDYYXXXXXXXXXXLNGRDYGSPDDRDHRSKRSERQSPGPEVNEQ 336
D RD+ RD Y SP +D R RS +S P+ E+
Sbjct: 188 DYRDH----RDDYSPGESL-----------SPHGQDKRHHRSNGRSASPDELER 226
>gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 89.0 bits (219), Expect = 2e-15
Identities = 57/114 (50%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRH-RRSLSRSPRQRHRSYSHSPTP-RH 174
GGREISIV+AEENRKTPQEMR TR S R++ G H RRS+SRSPR R+ SYS SP+P R
Sbjct: 128 GGREISIVFAEENRKTPQEMRMRTRTSGRYMDGSHRRRSVSRSPRSRYHSYSPSPSPARR 187
Query: 175 DSRDNGRGGRDYYXXXXXXXXXXLNGRDYGSPDDRDHRSKRSERQSPGPEVNEQ 336
D RD+ RD Y SP +D R RS +S P+ E+
Sbjct: 188 DYRDH----RDDYSPGESL-----------SPHGQDKRHHRSNGRSASPDELER 226
>ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa
Japonica Group] gi|215737124|dbj|BAG96053.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 243
Score = 89.0 bits (219), Expect = 2e-15
Identities = 57/114 (50%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRH-RRSLSRSPRQRHRSYSHSPTP-RH 174
GGREISIV+AEENRKTPQEMR TR S R++ G H RRS+SRSPR R+ SYS SP+P R
Sbjct: 128 GGREISIVFAEENRKTPQEMRMRTRTSGRYMDGSHRRRSVSRSPRSRYHSYSPSPSPARR 187
Query: 175 DSRDNGRGGRDYYXXXXXXXXXXLNGRDYGSPDDRDHRSKRSERQSPGPEVNEQ 336
D RD+ RD Y SP +D R RS +S P+ E+
Sbjct: 188 DYRDH----RDDYSPGESL-----------SPHGQDKRHHRSNGRSASPDELER 226
>ref|XP_003557895.1| PREDICTED: uncharacterized protein LOC100829528 [Brachypodium
distachyon]
Length = 244
Score = 88.2 bits (217), Expect = 3e-15
Identities = 58/113 (51%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = +1
Query: 4 GREISIVYAEENRKTPQEMRKMTRISERHVGG-RHRRSLSRSPRQRHRSYSHSPTP-RHD 177
GREISIV+AEENRKTPQEMR TR RH G R RRSLSRSPR R+ SYS P+P R
Sbjct: 126 GREISIVFAEENRKTPQEMRFRTRTGGRHDGNYRRRRSLSRSPRSRYPSYSPEPSPVRRH 185
Query: 178 SRDNGRGGRDYYXXXXXXXXXXLNGRDYGSPDDRDHRSKRSERQSPGPEVNEQ 336
SRD RG R+ Y SP RD RS +SP P+ E+
Sbjct: 186 SRD--RGDREKYSPGGSH-----------SPHARDKGHYRSNGRSPSPDGQER 225
>ref|XP_002314444.2| SC35-like splicing factor family protein [Populus trichocarpa]
gi|118484981|gb|ABK94355.1| unknown [Populus
trichocarpa] gi|550328960|gb|EEF00615.2| SC35-like
splicing factor family protein [Populus trichocarpa]
Length = 252
Score = 88.2 bits (217), Expect = 3e-15
Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRHRRSLSRSPRQRHRSYSHSPTP-RHD 177
GGREI IV+AEENRKTPQEMR+ R S+RH G R+ RSPR R+RSYS SP+P RHD
Sbjct: 115 GGREIRIVFAEENRKTPQEMRRTPRTSDRHGGSHGGRTPPRSPRHRYRSYSRSPSPARHD 174
Query: 178 SRDNG 192
SRD G
Sbjct: 175 SRDRG 179
>gb|EOY06353.1| SC35-like splicing factor 28 isoform 2 [Theobroma cacao]
Length = 291
Score = 87.8 bits (216), Expect = 4e-15
Identities = 50/72 (69%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRHRRSLSRSPRQRHRSYSHSPTP-RHD 177
GGREI IV+AEENRKTPQEMR TR S RH G RR+ RSPR+R+RSYS SP+P RHD
Sbjct: 114 GGREIRIVFAEENRKTPQEMRLSTRTSGRH--GGSRRTPPRSPRRRYRSYSRSPSPARHD 171
Query: 178 SRDNGRGGRDYY 213
SRD RG RD Y
Sbjct: 172 SRD--RGVRDDY 181
>gb|ACG43943.1| FUS-interacting serine-arginine-rich protein 1 [Zea mays]
gi|448878230|gb|AGE46078.1| arginine/serine-rich
splicing factor SCL28 transcript I [Zea mays]
Length = 240
Score = 85.5 bits (210), Expect = 2e-14
Identities = 56/112 (50%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRHRRSLSRSPRQRHRSYSHSPTP-RHD 177
GGREISIVYAEENRKTPQEMR TR S R++ R+ R LSRSPR R SYS P+P R D
Sbjct: 124 GGREISIVYAEENRKTPQEMRMRTRTSRRYMDERYTR-LSRSPRSRSHSYSPPPSPVRRD 182
Query: 178 SRDNGRGGRDYYXXXXXXXXXXLNGRDYGSPDDRDHRSKRSERQSPGPEVNE 333
R GR D Y SP RD R RS+ +SP P +++
Sbjct: 183 FR--GRERPDSYSPQYSH-----------SPRPRDSRHHRSDGRSPTPSLDD 221
>ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED:
uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 84.7 bits (208), Expect = 3e-14
Identities = 55/111 (49%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRHRRSLSRSPRQRHRSYSHSPTP-RHD 177
GGREI IV+AEENRKTPQEMR +R S R RRS +RSPR+R+RSYS SP+P RHD
Sbjct: 117 GGREIRIVFAEENRKTPQEMRVTSRSSGR---SYRRRSPARSPRRRNRSYSRSPSPARHD 173
Query: 178 SRDNGRGGRDYYXXXXXXXXXXLNGRDYGSPDDRDHRSKRSERQSPGPEVN 330
SR RG RD Y R R R +R +SP P+ N
Sbjct: 174 SR--SRGARDEYLSP---------ARSRSISHSRSPRDRRDYSRSPTPKDN 213
>gb|AGE46131.1| arginine/serine-rich splicing factor SCL28 transcript II [Sorghum
bicolor]
Length = 190
Score = 83.6 bits (205), Expect = 7e-14
Identities = 43/57 (75%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 1 GGREISIVYAEENRKTPQEMRKMTRISERHVGGRH-RRSLSRSPRQRHRSYSHSPTP 168
GGREISIVYAEENRKTPQEMR+ TR S R++ GR+ RRSLSRSPR R SYS SP+P
Sbjct: 124 GGREISIVYAEENRKTPQEMRRRTRTSGRYMEGRYTRRSLSRSPRSRSHSYSPSPSP 180