BLASTX nr result

ID: Zingiber24_contig00022520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00022520
         (341 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002463373.1| hypothetical protein SORBIDRAFT_02g042630 [S...    57   3e-06
ref|XP_004958656.1| PREDICTED: probable E3 ubiquitin-protein lig...    55   7e-06

>ref|XP_002463373.1| hypothetical protein SORBIDRAFT_02g042630 [Sorghum bicolor]
           gi|241926750|gb|EER99894.1| hypothetical protein
           SORBIDRAFT_02g042630 [Sorghum bicolor]
          Length = 325

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/50 (52%), Positives = 33/50 (66%)
 Frame = -1

Query: 341 YEDAMHLNELNILLSHSCRDYWQKXXXXXXXXXXXLTKKHWESVRQDFLG 192
           + DAMHL+ELN+LLSHSC +YW+K           L K+HWES  + FLG
Sbjct: 275 FPDAMHLDELNMLLSHSCPEYWEKRMQLERVERVRLAKEHWESQCRAFLG 324


>ref|XP_004958656.1| PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like 1-like
           isoform X1 [Setaria italica]
           gi|514737032|ref|XP_004958657.1| PREDICTED: probable E3
           ubiquitin-protein ligase BAH1-like 1-like isoform X2
           [Setaria italica] gi|514737034|ref|XP_004958658.1|
           PREDICTED: probable E3 ubiquitin-protein ligase
           BAH1-like 1-like isoform X3 [Setaria italica]
          Length = 321

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/50 (50%), Positives = 33/50 (66%)
 Frame = -1

Query: 341 YEDAMHLNELNILLSHSCRDYWQKXXXXXXXXXXXLTKKHWESVRQDFLG 192
           + DA+HL+ELN+LLSHSC +YW+K           L K+HWES  + FLG
Sbjct: 271 FPDAVHLDELNMLLSHSCPEYWEKRTQSERVERVRLAKEHWESQCRAFLG 320


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