BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00022500
         (840 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838849.1| hypothetical protein AMTR_s00002p00265220 [A...   226   1e-56
gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus pe...   211   3e-52
gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitat...   205   1e-50
gb|EOY05903.1| CRM family member 3A isoform 4 [Theobroma cacao]       202   1e-49
gb|EOY05902.1| CRM family member 3A isoform 3 [Theobroma cacao]       202   1e-49
gb|EOY05901.1| CRM family member 3A isoform 2 [Theobroma cacao]       202   1e-49
gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]       202   1e-49
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp...   202   2e-49
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   202   2e-49
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   202   2e-49
ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron sp...   198   2e-48
gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlise...   197   3e-48
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu...   194   3e-47
ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron sp...   193   7e-47
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp...   192   1e-46
tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]                   190   6e-46
ref|NP_001106061.1| CRM family member 3 [Zea mays] gi|156789080|...   190   6e-46
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp...   189   8e-46
ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citr...   189   1e-45
ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citr...   189   1e-45

>ref|XP_006838849.1| hypothetical protein AMTR_s00002p00265220 [Amborella trichopoda]
           gi|548841355|gb|ERN01418.1| hypothetical protein
           AMTR_s00002p00265220 [Amborella trichopoda]
          Length = 882

 Score =  226 bits (575), Expect = 1e-56
 Identities = 132/290 (45%), Positives = 173/290 (59%), Gaps = 30/290 (10%)
 Frame = +1

Query: 61  LHPCALLDSLHASVSRLRSPRFLVVR-RFSAVSPSLRSLRERSDRPKAHRFPEND----- 222
           L+P ALLDSLH++ SR    R  + R + + VS  L ++    D     +   N      
Sbjct: 9   LYPTALLDSLHSTWSRFNGSRLQITRLQRTHVSSYLNTITNSKDLESPEKISPNPHCNGV 68

Query: 223 ------LQRPPWINGWRGPSFRPFPKWPPSAVDYR-HGLSSD--------DEEFXXXXXX 357
                   +  WI+ W G   R  PK P + +DYR +G+SSD        D+E       
Sbjct: 69  IAEKTTQVQGHWIHKWTGSQCRNLPKRPKAVLDYRDNGVSSDEQEDINSKDDELGFEEEA 128

Query: 358 XXXXXXXIVEKLKKFGYIDDSEEVKETPL-PEKGSVEDIFYAEDGILPDSRGGLSFDL-- 528
                  IV+KLK+FG++D+ +   +    PE+GSVED+FYAE G+LP+SRGGLS D   
Sbjct: 129 EKSTMDQIVDKLKRFGFMDERKTGLDMERRPERGSVEDVFYAEPGVLPNSRGGLSLDSPN 188

Query: 529 ------NEEIRFPWEKPSEADNVAPARKKRTKTSLAELTLPEGELRRLRHMAIRTKSRTK 690
                 N E+RFPW++          RK R++TSLAELTLP  E+RRL ++A+R K RTK
Sbjct: 189 GVLERENGEVRFPWQRE------VSVRKTRSRTSLAELTLPASEIRRLTNLALRMKGRTK 242

Query: 691 IKGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILERKTGGL 840
           IKGAGVT+ IVD IH+KWK+EE+VR+KCEG P LNMKR HEILERKTGGL
Sbjct: 243 IKGAGVTQAIVDSIHKKWKSEEIVRIKCEGAPTLNMKRSHEILERKTGGL 292


>gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  211 bits (536), Expect = 3e-52
 Identities = 125/304 (41%), Positives = 171/304 (56%), Gaps = 43/304 (14%)
 Frame = +1

Query: 58  QLHPCALLDSLHASVSRLRSPRFLVVRRFSAV------------------SPSLRSLRE- 180
           QL+P +L DS  +S S+   P   + R  S++                  +P    LR+ 
Sbjct: 8   QLYPTSLFDSFQSSFSKFHGPHIHLFRCGSSIPFKKHTFYATHYTISSTLNPEQNPLRKS 67

Query: 181 ---RSDRPKAHRFPENDLQRPPWINGWRGPSFRPFPKWPPSAVDYRHGLSSD-------D 330
              R ++P +   P+ +     WI+ W        PK P + +DY+   S +       +
Sbjct: 68  NFVRKNQPISQYKPKKNFSSSSWIDKWNESHKHNRPKPPRAVLDYQSSESGNLSGSGYAE 127

Query: 331 EEFXXXXXXXXXXXXXIVEKLKKFGYIDDSEEVK---ETPLPEKGSVEDIFYAEDGILPD 501
            +              IVEKLKKFGY+DDS E K      + EKGSVEDIFY E+G+LP+
Sbjct: 128 GDGGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRDSVIEKGSVEDIFYIEEGMLPN 187

Query: 502 SRGGLS----------FDLNEEIRFPWEKPSEADNVAPAR-KKRTKTSLAELTLPEGELR 648
           SRGG S          F  + ++RFPWEKP E +       +++++TSLAELTLPE ELR
Sbjct: 188 SRGGFSEESPLGIENVFGGDGKVRFPWEKPKEEEKQEEGSVRRKSRTSLAELTLPESELR 247

Query: 649 RLRHMAIRTKSRTKIKGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILERK 828
           RL ++  + K +T+I G GVT+ +V++IHE+WKT E+VRLK EGPPALNMKRMHEILERK
Sbjct: 248 RLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVRLKIEGPPALNMKRMHEILERK 307

Query: 829 TGGL 840
           TGGL
Sbjct: 308 TGGL 311


>gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
           notabilis]
          Length = 878

 Score =  205 bits (522), Expect = 1e-50
 Identities = 128/301 (42%), Positives = 164/301 (54%), Gaps = 40/301 (13%)
 Frame = +1

Query: 58  QLHPCALLDSLHASVSRL----RSPRFLVVRRFSAVSPSLRSLRERSDRPKA-------- 201
           Q +P +  DSLH +  +      S  F   R +S    S+ S       P          
Sbjct: 8   QFYPTSFFDSLHGTHIKFFRYGSSITFRKHRLYSTKYSSVNSSSSSEQNPGGKYNKFFRT 67

Query: 202 ------HRFPENDLQRPPWINGWRGPSFRPFPKWPPSAVDYRHGLSSDDEEFXXXXXXXX 363
                 H   +++L    WI  W     +  PK P + +DYR+  S +            
Sbjct: 68  TQNNNWHNKYDDNLSSTSWIEKWNETHQQIRPKPPGAVLDYRNSESGNQPRSSYANRNGG 127

Query: 364 XXXXX------IVEKLKKFGYIDD----SEEVKETPLPEKGSVEDIFYAEDGILPDSRGG 513
                      IVEKLKKFGY+DD     +E K   + EKGSVEDIFY E+G+LP+ RGG
Sbjct: 128 DNNSGGSTMERIVEKLKKFGYMDDVGSEGKEDKGERVIEKGSVEDIFYVEEGMLPNPRGG 187

Query: 514 LSFDL-----------NEEIRFPWEKPSE-ADNVAPARKKRTKTSLAELTLPEGELRRLR 657
            S D              E+RFPWEKP E  +    + ++R+KTSLAELTLPE ELRRLR
Sbjct: 188 FSPDSPLGVEGVFGGNGGEVRFPWEKPKEKVEKEGGSMRRRSKTSLAELTLPESELRRLR 247

Query: 658 HMAIRTKSRTKIKGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILERKTGG 837
           ++  + K +T+I GAGVT+E+VD+IHE+WKT E+VRLK EG PALNMKRMHEILERKTGG
Sbjct: 248 NLTFQKKHKTRIGGAGVTQEVVDMIHERWKTLEIVRLKIEGAPALNMKRMHEILERKTGG 307

Query: 838 L 840
           L
Sbjct: 308 L 308


>gb|EOY05903.1| CRM family member 3A isoform 4 [Theobroma cacao]
          Length = 645

 Score =  202 bits (514), Expect = 1e-49
 Identities = 120/245 (48%), Positives = 147/245 (60%), Gaps = 21/245 (8%)
 Frame = +1

Query: 169 SLRERSDRPKAHRFPENDLQ-RPPWINGWRGPSFRPFPKWPPSAVDYRHG---LSSDDEE 336
           SL  +  + K   FP  D   R  W++ W        PK P +  +YR      S    +
Sbjct: 63  SLFHQYPKSKTKAFPTKDPTFRSNWLDSWNKTHKGFGPKPPKTVFNYRKKGDVWSLSYSQ 122

Query: 337 FXXXXXXXXXXXXXIVEKLKKFGYIDDSEEVKETP------LPEKGSVEDIFYAEDGILP 498
                         IVEKLKKFGYI +  E KE        + E+GS+EDIFY E+G+LP
Sbjct: 123 SDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEGMLP 182

Query: 499 DSRGGLS----------FDLNEEIRFPWEKPSEADNVAPARKKR-TKTSLAELTLPEGEL 645
           ++RGG S          F  + E+RFPWEK  E +       +R +KTSLAELTLPE EL
Sbjct: 183 NNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAELTLPESEL 242

Query: 646 RRLRHMAIRTKSRTKIKGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILER 825
           RRLR++  RTKS+ +IKGAGVT+E+VD IHEKWKTEE+VRLK EG PALNMKRMHEILER
Sbjct: 243 RRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKRMHEILER 302

Query: 826 KTGGL 840
           KTGGL
Sbjct: 303 KTGGL 307


>gb|EOY05902.1| CRM family member 3A isoform 3 [Theobroma cacao]
          Length = 856

 Score =  202 bits (514), Expect = 1e-49
 Identities = 120/245 (48%), Positives = 147/245 (60%), Gaps = 21/245 (8%)
 Frame = +1

Query: 169 SLRERSDRPKAHRFPENDLQ-RPPWINGWRGPSFRPFPKWPPSAVDYRHG---LSSDDEE 336
           SL  +  + K   FP  D   R  W++ W        PK P +  +YR      S    +
Sbjct: 63  SLFHQYPKSKTKAFPTKDPTFRSNWLDSWNKTHKGFGPKPPKTVFNYRKKGDVWSLSYSQ 122

Query: 337 FXXXXXXXXXXXXXIVEKLKKFGYIDDSEEVKETP------LPEKGSVEDIFYAEDGILP 498
                         IVEKLKKFGYI +  E KE        + E+GS+EDIFY E+G+LP
Sbjct: 123 SDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEGMLP 182

Query: 499 DSRGGLS----------FDLNEEIRFPWEKPSEADNVAPARKKR-TKTSLAELTLPEGEL 645
           ++RGG S          F  + E+RFPWEK  E +       +R +KTSLAELTLPE EL
Sbjct: 183 NNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAELTLPESEL 242

Query: 646 RRLRHMAIRTKSRTKIKGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILER 825
           RRLR++  RTKS+ +IKGAGVT+E+VD IHEKWKTEE+VRLK EG PALNMKRMHEILER
Sbjct: 243 RRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKRMHEILER 302

Query: 826 KTGGL 840
           KTGGL
Sbjct: 303 KTGGL 307


>gb|EOY05901.1| CRM family member 3A isoform 2 [Theobroma cacao]
          Length = 685

 Score =  202 bits (514), Expect = 1e-49
 Identities = 120/245 (48%), Positives = 147/245 (60%), Gaps = 21/245 (8%)
 Frame = +1

Query: 169 SLRERSDRPKAHRFPENDLQ-RPPWINGWRGPSFRPFPKWPPSAVDYRHG---LSSDDEE 336
           SL  +  + K   FP  D   R  W++ W        PK P +  +YR      S    +
Sbjct: 63  SLFHQYPKSKTKAFPTKDPTFRSNWLDSWNKTHKGFGPKPPKTVFNYRKKGDVWSLSYSQ 122

Query: 337 FXXXXXXXXXXXXXIVEKLKKFGYIDDSEEVKETP------LPEKGSVEDIFYAEDGILP 498
                         IVEKLKKFGYI +  E KE        + E+GS+EDIFY E+G+LP
Sbjct: 123 SDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEGMLP 182

Query: 499 DSRGGLS----------FDLNEEIRFPWEKPSEADNVAPARKKR-TKTSLAELTLPEGEL 645
           ++RGG S          F  + E+RFPWEK  E +       +R +KTSLAELTLPE EL
Sbjct: 183 NNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAELTLPESEL 242

Query: 646 RRLRHMAIRTKSRTKIKGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILER 825
           RRLR++  RTKS+ +IKGAGVT+E+VD IHEKWKTEE+VRLK EG PALNMKRMHEILER
Sbjct: 243 RRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKRMHEILER 302

Query: 826 KTGGL 840
           KTGGL
Sbjct: 303 KTGGL 307


>gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]
          Length = 876

 Score =  202 bits (514), Expect = 1e-49
 Identities = 120/245 (48%), Positives = 147/245 (60%), Gaps = 21/245 (8%)
 Frame = +1

Query: 169 SLRERSDRPKAHRFPENDLQ-RPPWINGWRGPSFRPFPKWPPSAVDYRHG---LSSDDEE 336
           SL  +  + K   FP  D   R  W++ W        PK P +  +YR      S    +
Sbjct: 63  SLFHQYPKSKTKAFPTKDPTFRSNWLDSWNKTHKGFGPKPPKTVFNYRKKGDVWSLSYSQ 122

Query: 337 FXXXXXXXXXXXXXIVEKLKKFGYIDDSEEVKETP------LPEKGSVEDIFYAEDGILP 498
                         IVEKLKKFGYI +  E KE        + E+GS+EDIFY E+G+LP
Sbjct: 123 SDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEGMLP 182

Query: 499 DSRGGLS----------FDLNEEIRFPWEKPSEADNVAPARKKR-TKTSLAELTLPEGEL 645
           ++RGG S          F  + E+RFPWEK  E +       +R +KTSLAELTLPE EL
Sbjct: 183 NNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAELTLPESEL 242

Query: 646 RRLRHMAIRTKSRTKIKGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILER 825
           RRLR++  RTKS+ +IKGAGVT+E+VD IHEKWKTEE+VRLK EG PALNMKRMHEILER
Sbjct: 243 RRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKRMHEILER 302

Query: 826 KTGGL 840
           KTGGL
Sbjct: 303 KTGGL 307


>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score =  202 bits (513), Expect = 2e-49
 Identities = 131/298 (43%), Positives = 171/298 (57%), Gaps = 37/298 (12%)
 Frame = +1

Query: 58  QLHPCALLDSLHASVSRLRSPRFLVVR---------RFSAVSPSLRS-LRERSDRPKAHR 207
           QL+P +LL+S   S+S+     F + R          F A    + S L    + P+   
Sbjct: 8   QLYPTSLLES---SLSKFHGTHFHLFRYSSIPFKKQSFHATQYFITSSLTPEQNPPRKLN 64

Query: 208 F------PENDLQRPPWINGWRGPSFRPFPKWPPSAVDYRHG----LSSDDEEFXXXXXX 357
                  P  +L    WI+ W     +  P+ P + +DY+      LSSD  +       
Sbjct: 65  LLICQYKPTKNLSSCSWIDRWNDSRKQHGPRRPRAVLDYQSNESGNLSSDGND------- 117

Query: 358 XXXXXXXIVEKLKKFGYIDDSE-----EVKETPLPEKGSVEDIFYAEDGILPDSRGGLSF 522
                  IVEKLKKFGYI + +     EV+E  + EKGSVEDIFY E+G+LP+SRGG S 
Sbjct: 118 GGSTMDKIVEKLKKFGYIAEDKNEGRGEVRERVI-EKGSVEDIFYVEEGMLPNSRGGFSG 176

Query: 523 -----------DLNEEIRFPWEKPSEADNVAPAR-KKRTKTSLAELTLPEGELRRLRHMA 666
                      D   E+RFPWEKP E +       ++R++TSLAELTLPE ELRRLR++ 
Sbjct: 177 VSPLGTEDVFGDGGGEVRFPWEKPREREKEEGGSIRRRSRTSLAELTLPESELRRLRNLT 236

Query: 667 IRTKSRTKIKGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILERKTGGL 840
            + K +TKI GAGVT+ +V++IHE+WKT E+VRLK EGPPALNMKRMHEILERKTGGL
Sbjct: 237 FQKKHKTKIGGAGVTQAVVEMIHERWKTAEIVRLKIEGPPALNMKRMHEILERKTGGL 294


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Vitis vinifera]
           gi|297737163|emb|CBI26364.3| unnamed protein product
           [Vitis vinifera]
          Length = 902

 Score =  202 bits (513), Expect = 2e-49
 Identities = 108/214 (50%), Positives = 140/214 (65%), Gaps = 13/214 (6%)
 Frame = +1

Query: 238 WINGWRGPSFRPFPKWPPSAVDYRHGLSSDDEEFXXXXXXXXXXXXXIVEKLKKFGYIDD 417
           WI+ W GP  +  PK     ++YR+   S+                 IVEKLKKFGY+DD
Sbjct: 83  WIDKWNGPHQKSHPKESRPVMNYRN---SETVSRSDGGSGGGSTMEKIVEKLKKFGYMDD 139

Query: 418 SEEVKETP---LPEKGSVEDIFYAEDGILPDSRGGLSFDL----------NEEIRFPWEK 558
            +E KE     + EKGS+EDIFY E+GILP+ +GG S D           N E+RFPWE+
Sbjct: 140 VKETKENVQERIIEKGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWER 199

Query: 559 PSEADNVAPARKKRTKTSLAELTLPEGELRRLRHMAIRTKSRTKIKGAGVTKEIVDLIHE 738
           P   +      + +++TSLAELTLPE ELRRLR++ +RTK++TKI G GVT+ +VD+I E
Sbjct: 200 PKVEEGSV---RIKSRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIRE 256

Query: 739 KWKTEEVVRLKCEGPPALNMKRMHEILERKTGGL 840
           KWKT E+V+LKCEG  ALNM+R+HEILERKTGGL
Sbjct: 257 KWKTSEIVKLKCEGAAALNMRRIHEILERKTGGL 290


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  202 bits (513), Expect = 2e-49
 Identities = 108/214 (50%), Positives = 140/214 (65%), Gaps = 13/214 (6%)
 Frame = +1

Query: 238 WINGWRGPSFRPFPKWPPSAVDYRHGLSSDDEEFXXXXXXXXXXXXXIVEKLKKFGYIDD 417
           WI+ W GP  +  PK     ++YR+   S+                 IVEKLKKFGY+DD
Sbjct: 83  WIDKWNGPHQKSHPKEXRPVMNYRN---SETVSRSDGGSGGGSTMEKIVEKLKKFGYMDD 139

Query: 418 SEEVKETP---LPEKGSVEDIFYAEDGILPDSRGGLSFDL----------NEEIRFPWEK 558
            +E KE     + EKGS+EDIFY E+GILP+ +GG S D           N E+RFPWE+
Sbjct: 140 VKETKENVQERIIEKGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWER 199

Query: 559 PSEADNVAPARKKRTKTSLAELTLPEGELRRLRHMAIRTKSRTKIKGAGVTKEIVDLIHE 738
           P   +      + +++TSLAELTLPE ELRRLR++ +RTK++TKI G GVT+ +VD+I E
Sbjct: 200 PKVEEGSV---RIKSRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIRE 256

Query: 739 KWKTEEVVRLKCEGPPALNMKRMHEILERKTGGL 840
           KWKT E+V+LKCEG  ALNM+R+HEILERKTGGL
Sbjct: 257 KWKTSEIVKLKCEGAAALNMRRIHEILERKTGGL 290


>ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cicer arietinum]
          Length = 838

 Score =  198 bits (504), Expect = 2e-48
 Identities = 128/293 (43%), Positives = 159/293 (54%), Gaps = 30/293 (10%)
 Frame = +1

Query: 52  TLQLHPCALLDSLHASVSRLRSPRFLVVRRFSAVSPSLRSLRERSDRPKAHRFPENDLQR 231
           T QLHP   +DS H S     S RF      +  +PS     +     K    P N    
Sbjct: 6   TRQLHP--FIDSFHTSSPSFNSLRFFTYNLTTYKTPSTNFTFK-----KYPILPRNTFST 58

Query: 232 PPWINGWRGPSFRPFPKWPPSAV-DYR----------HGLSSDDEEFXXXXXXXXXXXXX 378
             W+  W  PS +     PP AV +YR          H  SSDDE+              
Sbjct: 59  HTWLKHWNQPSSKHNRPKPPRAVLNYRNSGNGHSSKSHFSSSDDED-----NNGGSTMDR 113

Query: 379 IVEKLKKFGYIDDSEEVKETP-----LPEKGSVEDIFYAEDGILPDSRGGLSFDL----- 528
           IVEKLKKFGY DD ++ K+       + EKGSVEDIFY E+GILP+++GG S +      
Sbjct: 114 IVEKLKKFGYDDDDDDEKKDHNTKERVIEKGSVEDIFYVEEGILPNTKGGFSSESPFGVG 173

Query: 529 -----NEEIRFPWEKPSEADNVAP----ARKKRTKTSLAELTLPEGELRRLRHMAIRTKS 681
                  E+RFPWEK +  D+         +K++KTSLAELTLPE EL+RL  +    K 
Sbjct: 174 RFGSDGGEVRFPWEKKTVVDDEEEEDRKGLRKKSKTSLAELTLPESELKRLLKLTFEKKH 233

Query: 682 RTKIKGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILERKTGGL 840
           +T+I G GVT+ +VD IHE+WKT E+VRLK EG  ALNMKRMHEILERKTGGL
Sbjct: 234 KTRIGGGGVTQAVVDKIHERWKTSEIVRLKFEGDAALNMKRMHEILERKTGGL 286


>gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlisea aurea]
          Length = 761

 Score =  197 bits (502), Expect = 3e-48
 Identities = 125/289 (43%), Positives = 160/289 (55%), Gaps = 28/289 (9%)
 Frame = +1

Query: 58  QLHP--CALLDSLHASVSRLRSPRFLVVRRFSAVSPSLRSLRERSDRPKAHRFPENDLQ- 228
           Q +P   + + SL +SVS  +  R  ++   S+  PS    R    R +      N    
Sbjct: 8   QFYPKTASFVHSLQSSVSDFQLRRLQLISFCSSARPSASRGRFNPSRGRKRDGGRNLASG 67

Query: 229 ---------RPPWINGWRG-PSFRPFPKWPPSAVDYRHGLSSDDEEFXXXXXXXXXXXXX 378
                       W++ W   P  +   + P + VDYR+     D E              
Sbjct: 68  TLVADGRGASSSWMDFWNAVPGTQHVNRKPQAVVDYRNADDVSDAEEGTSTSTGVSTMQR 127

Query: 379 IVEKLKKFGYIDDSEEVKETP----LPEKGSVEDIFYAEDGILPDSRGGLS--FDLNEEI 540
           IV KLKKFGY+DD     E      + EKGSVEDIF  E+G+LP+SRGG+S  F   +EI
Sbjct: 128 IVAKLKKFGYLDDDAAADENEAGRQIVEKGSVEDIFSVEEGLLPNSRGGISHEFPFGDEI 187

Query: 541 ---------RFPWEKPSEADNVAPARKKRTKTSLAELTLPEGELRRLRHMAIRTKSRTKI 693
                    RFPWEK ++ +    +   R   SLAE TLPE E+ RLR++A+RTK++T+I
Sbjct: 188 VAVKGDVRVRFPWEKKNDPNVQKSSLDSRKARSLAESTLPESEVTRLRNLALRTKNKTRI 247

Query: 694 KGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILERKTGGL 840
           KGAGVT+EIV+ IHEKWKT EVVRLK EGP ALNMKRMHEILERKTGGL
Sbjct: 248 KGAGVTQEIVEAIHEKWKTAEVVRLKIEGPSALNMKRMHEILERKTGGL 296


>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
           gi|222864769|gb|EEF01900.1| hypothetical protein
           POPTR_0010s08770g [Populus trichocarpa]
          Length = 894

 Score =  194 bits (494), Expect = 3e-47
 Identities = 110/244 (45%), Positives = 145/244 (59%), Gaps = 15/244 (6%)
 Frame = +1

Query: 154 SPSLRSLRERSDRPKAHRFPENDLQRPPWINGWRGPSFRPFPKWPPSAVDYRHGLSSDDE 333
           +PS +S    +D+ K             W   W  P+ +  P+ P +  DYR   S+   
Sbjct: 51  NPSTKSTSFPTDKSKTLNLSTGS----SWFFNWNKPNKQNLPRTPQAVFDYRSNNSNSSG 106

Query: 334 EFXXXXXXXXXXXXXIVEKLKKFGYID----DSEEVKETPLPEKGSVEDIFYAEDGILPD 501
                          IVEKLKK GY+D    +++E  +  + EKGSVEDIFY E+G+LP+
Sbjct: 107 S--------GSTMEKIVEKLKKHGYMDGDVNENKERMQERVIEKGSVEDIFYVEEGMLPN 158

Query: 502 SRGGLS----------FDLNEEIRFPWEKPS-EADNVAPARKKRTKTSLAELTLPEGELR 648
           +RGG S          F  + E+RFPWEKP  E D      + +++TSLAELTLPE ELR
Sbjct: 159 ARGGFSKESPLGVEDVFRSDGEVRFPWEKPKKEEDEGKWTARSKSRTSLAELTLPESELR 218

Query: 649 RLRHMAIRTKSRTKIKGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILERK 828
           RLR++   TKS+T++ G GVT+E+VD IH+KWKT E+ R+K EG PALNMKRMHEILE K
Sbjct: 219 RLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIARVKVEGAPALNMKRMHEILENK 278

Query: 829 TGGL 840
           TGGL
Sbjct: 279 TGGL 282


>ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cucumis sativus]
           gi|449504099|ref|XP_004162252.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cucumis sativus]
          Length = 874

 Score =  193 bits (490), Expect = 7e-47
 Identities = 114/247 (46%), Positives = 143/247 (57%), Gaps = 28/247 (11%)
 Frame = +1

Query: 184 SDRPKAHRFP-ENDLQRPPWINGWRGPSFRPFPKWPPSAVDYRHGLSSDDEEFXXXXXXX 360
           S R   +R+    +L R  WI+ W   + R  PK P + +DY    SSD+ E        
Sbjct: 64  SSRTPVYRYNLRRNLSRVSWIDRWNETAKRNRPKPPRAVLDYP---SSDENEVSISSTGF 120

Query: 361 XXXXXX----------------IVEKLKKFGYIDDSEEVK-ETPLPEKGSVEDIFYAEDG 489
                                 IV KLKKFGYIDD  + K E    EKGSVEDI Y E+G
Sbjct: 121 SKSYRASSRIDDDGRGGSTMEKIVRKLKKFGYIDDENKEKGEERAIEKGSVEDILYIEEG 180

Query: 490 ILPDSRGGLS----------FDLNEEIRFPWEKPSEADNVAPARKKRTKTSLAELTLPEG 639
           +LP++RGG S          F  + E+RFPWEKP E ++      +R   SLA+LTLPE 
Sbjct: 181 MLPNTRGGFSKESPMGDENMFGSDGEVRFPWEKPKEKEDTHGDSTRRGSASLAQLTLPEP 240

Query: 640 ELRRLRHMAIRTKSRTKIKGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEIL 819
           ELRRLR++  + + + KI G GVT+ +VD+IHEKWK+ E+VRLK  GPPALNMKRMHEIL
Sbjct: 241 ELRRLRNLTFQKRHKMKIGGGGVTQAVVDVIHEKWKSSEIVRLKILGPPALNMKRMHEIL 300

Query: 820 ERKTGGL 840
           ERKTGGL
Sbjct: 301 ERKTGGL 307


>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Citrus sinensis]
          Length = 933

 Score =  192 bits (488), Expect = 1e-46
 Identities = 132/326 (40%), Positives = 171/326 (52%), Gaps = 55/326 (16%)
 Frame = +1

Query: 28  PPQSFSMATLQLHPCALLDSLHASVSRLRSPRFLVVR---------RFSAVSPSLRSLRE 180
           P + F  AT      A+ DS  +S S+     F   R         RF   + S  S  E
Sbjct: 5   PSRQFCPAT------AIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHE 58

Query: 181 RSDRPKAHRFPENDL-------------QRPPWINGWRGPSFRPFPKWPPSAVDYRHG-- 315
           ++   K   F  N+                  W+  W  P+     K P ++V+YR    
Sbjct: 59  KNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNV 118

Query: 316 --------LSSDDEEFXXXXXXXXXXXXXIVEKLKKFGYIDDSE----------EVKETP 441
                    +  D                IVEKLKKFGY+ D +          + KE  
Sbjct: 119 DLSALGFARTDSDGNGVGGVDDGGNTMGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERV 178

Query: 442 LPEKGSVEDIFYAEDGILPDSRGGLSFD----LNEEI------RFPWEKPSEADNVAPAR 591
           + EKGS+EDIFY E+G+LP++RGG S +    L EE+      +FPWEK  E   VA  R
Sbjct: 179 I-EKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKE--EVAEGR 235

Query: 592 ---KKRTKTSLAELTLPEGELRRLRHMAIRTKSRTKIKGAGVTKEIVDLIHEKWKTEEVV 762
              K+ ++TSLAELTLPE ELRRLR++  +TKS+T+IKGAG+T+ +VD+IHEKWKT E+V
Sbjct: 236 WLVKRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIV 295

Query: 763 RLKCEGPPALNMKRMHEILERKTGGL 840
           RLK EG PALNMKRMHEILERKTGGL
Sbjct: 296 RLKIEGAPALNMKRMHEILERKTGGL 321


>tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]
          Length = 1523

 Score =  190 bits (482), Expect = 6e-46
 Identities = 106/211 (50%), Positives = 131/211 (62%), Gaps = 9/211 (4%)
 Frame = +1

Query: 235  PWINGWRGPSFRPFPKWPPSAVDYRHGLS----SDDEE-FXXXXXXXXXXXXXIVEKLKK 399
            PW+  W  P  R   + PP+A+D R   S    SDDE+               I+ +L++
Sbjct: 711  PWLYSWSHPRQRGRLRAPPAALDLRPEPSPSSDSDDEDAVGASRSSGRSTMSLILSRLRR 770

Query: 400  FGYIDDSEEVKETPLPEKGSVEDIFYAEDGILPDSRGGLSFDLNE----EIRFPWEKPSE 567
             GY  +       P P +GSVED+F A+DG+LP++RGG   D  E    + RFPWE+P  
Sbjct: 771  AGYSGEDPRAAAPPHPPRGSVEDVFRADDGVLPNARGGFDADDEERALGDARFPWERPMP 830

Query: 568  ADNVAPARKKRTKTSLAELTLPEGELRRLRHMAIRTKSRTKIKGAGVTKEIVDLIHEKWK 747
                AP R  R+ T +AELTLP  ELRRLRH AIR KSRTK+ GAGVT+EIV+ I EKWK
Sbjct: 831  PPEAAP-RSARSPTWMAELTLPAAELRRLRHAAIRIKSRTKVGGAGVTREIVEKIKEKWK 889

Query: 748  TEEVVRLKCEGPPALNMKRMHEILERKTGGL 840
            TEEVVR+K  G PALNM+  HEILERKTGGL
Sbjct: 890  TEEVVRVKVSGTPALNMRLFHEILERKTGGL 920


>ref|NP_001106061.1| CRM family member 3 [Zea mays] gi|156789080|gb|ABU96081.1| CRM
           family member 3 [Zea mays]
          Length = 842

 Score =  190 bits (482), Expect = 6e-46
 Identities = 106/211 (50%), Positives = 131/211 (62%), Gaps = 9/211 (4%)
 Frame = +1

Query: 235 PWINGWRGPSFRPFPKWPPSAVDYRHGLS----SDDEE-FXXXXXXXXXXXXXIVEKLKK 399
           PW+  W  P  R   + PP+A+D R   S    SDDE+               I+ +L++
Sbjct: 30  PWLYSWSHPRQRGRLRAPPAALDLRPEPSPSSDSDDEDAVGASRSSGRSTMSLILSRLRR 89

Query: 400 FGYIDDSEEVKETPLPEKGSVEDIFYAEDGILPDSRGGLSFDLNE----EIRFPWEKPSE 567
            GY  +       P P +GSVED+F A+DG+LP++RGG   D  E    + RFPWE+P  
Sbjct: 90  AGYSGEDPRAAAPPHPPRGSVEDVFRADDGVLPNARGGFDADDEERALGDARFPWERPMP 149

Query: 568 ADNVAPARKKRTKTSLAELTLPEGELRRLRHMAIRTKSRTKIKGAGVTKEIVDLIHEKWK 747
               AP R  R+ T +AELTLP  ELRRLRH AIR KSRTK+ GAGVT+EIV+ I EKWK
Sbjct: 150 PPEAAP-RSARSPTWMAELTLPAAELRRLRHAAIRIKSRTKVGGAGVTREIVEKIKEKWK 208

Query: 748 TEEVVRLKCEGPPALNMKRMHEILERKTGGL 840
           TEEVVR+K  G PALNM+  HEILERKTGGL
Sbjct: 209 TEEVVRVKVSGTPALNMRLFHEILERKTGGL 239


>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Glycine max]
          Length = 835

 Score =  189 bits (481), Expect = 8e-46
 Identities = 111/220 (50%), Positives = 137/220 (62%), Gaps = 19/220 (8%)
 Frame = +1

Query: 238 WINGWRGPSFRPFPKWPPSAV-DY-------RHGLSSDDEEFXXXXXXXXXXXXXIVEKL 393
           W+  W  P+       PP AV DY       + GL+S DEE              IVEKL
Sbjct: 64  WLKRWNDPTNNHARPKPPCAVLDYSENGHASKSGLASSDEE-GGDGNTGGSTMDRIVEKL 122

Query: 394 KKFGYIDDSEEVKETPLPEKGSVEDIFYAEDGILPDSRGGLSFDL----------NEEIR 543
           KKFGY++D  + KE  + EKGSVEDIFY E+G+LP+SRGG S +           + E+R
Sbjct: 123 KKFGYVEDGIQNKERVI-EKGSVEDIFYVEEGMLPNSRGGFSSESPLGFGSFGSDDREVR 181

Query: 544 FPWEKPS-EADNVAPARKKRTKTSLAELTLPEGELRRLRHMAIRTKSRTKIKGAGVTKEI 720
           FPWEKP  E      + + R+KTSLAELTLPE EL+RL  +    K +T+I  +GVT+ +
Sbjct: 182 FPWEKPVVEELEERKSMRSRSKTSLAELTLPESELKRLLKLTFEKKHKTRIGRSGVTQAV 241

Query: 721 VDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILERKTGGL 840
           VD IHE+WKT E+VRLK EG  ALNMKRMHEILERKTGGL
Sbjct: 242 VDKIHERWKTSEIVRLKFEGEAALNMKRMHEILERKTGGL 281


>ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
           gi|557521988|gb|ESR33355.1| hypothetical protein
           CICLE_v10004262mg [Citrus clementina]
          Length = 934

 Score =  189 bits (480), Expect = 1e-45
 Identities = 128/325 (39%), Positives = 170/325 (52%), Gaps = 54/325 (16%)
 Frame = +1

Query: 28  PPQSFSMATLQLHPCALLDSLHASVSRLRSPRFLVVR---------RFSAVSPSLRSLRE 180
           P + F  AT      A+ DS  +S S+     F   R          F   + S  S  E
Sbjct: 5   PSRQFCPAT------AIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNHFFYQNFSSNSAHE 58

Query: 181 RSDRPKAHRFPENDL-------------QRPPWINGWRGPSFRPFPKWPPSAVDYRHG-- 315
           ++   K   F  N+                  W+  W  P+     K P ++V+YR    
Sbjct: 59  KNTPRKICSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNV 118

Query: 316 --------LSSDDEEFXXXXXXXXXXXXXIVEKLKKFGYIDDSE----------EVKETP 441
                    +  D                IVEKLKKFGY+ D +          + KE  
Sbjct: 119 DLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERV 178

Query: 442 LPEKGSVEDIFYAEDGILPDSRGGLSFD----LNEEI------RFPWEKPSE--ADNVAP 585
           + EKGS+EDIFY E+G+LP++RGG S +    L EE+      +FPWEK  E  A+    
Sbjct: 179 I-EKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWL 237

Query: 586 ARKKRTKTSLAELTLPEGELRRLRHMAIRTKSRTKIKGAGVTKEIVDLIHEKWKTEEVVR 765
            +++ ++TSLAELTLPE ELRRLR++  +TKS+T+IKGAG+T+ +VD+IHEKWKT E+VR
Sbjct: 238 VKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVR 297

Query: 766 LKCEGPPALNMKRMHEILERKTGGL 840
           LK EG PALNMKRMHEILERKTGGL
Sbjct: 298 LKIEGAPALNMKRMHEILERKTGGL 322


>ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
           gi|557521987|gb|ESR33354.1| hypothetical protein
           CICLE_v10004262mg [Citrus clementina]
          Length = 860

 Score =  189 bits (480), Expect = 1e-45
 Identities = 128/325 (39%), Positives = 170/325 (52%), Gaps = 54/325 (16%)
 Frame = +1

Query: 28  PPQSFSMATLQLHPCALLDSLHASVSRLRSPRFLVVR---------RFSAVSPSLRSLRE 180
           P + F  AT      A+ DS  +S S+     F   R          F   + S  S  E
Sbjct: 5   PSRQFCPAT------AIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNHFFYQNFSSNSAHE 58

Query: 181 RSDRPKAHRFPENDL-------------QRPPWINGWRGPSFRPFPKWPPSAVDYRHG-- 315
           ++   K   F  N+                  W+  W  P+     K P ++V+YR    
Sbjct: 59  KNTPRKICSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNV 118

Query: 316 --------LSSDDEEFXXXXXXXXXXXXXIVEKLKKFGYIDDSE----------EVKETP 441
                    +  D                IVEKLKKFGY+ D +          + KE  
Sbjct: 119 DLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERV 178

Query: 442 LPEKGSVEDIFYAEDGILPDSRGGLSFD----LNEEI------RFPWEKPSE--ADNVAP 585
           + EKGS+EDIFY E+G+LP++RGG S +    L EE+      +FPWEK  E  A+    
Sbjct: 179 I-EKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWL 237

Query: 586 ARKKRTKTSLAELTLPEGELRRLRHMAIRTKSRTKIKGAGVTKEIVDLIHEKWKTEEVVR 765
            +++ ++TSLAELTLPE ELRRLR++  +TKS+T+IKGAG+T+ +VD+IHEKWKT E+VR
Sbjct: 238 VKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVR 297

Query: 766 LKCEGPPALNMKRMHEILERKTGGL 840
           LK EG PALNMKRMHEILERKTGGL
Sbjct: 298 LKIEGAPALNMKRMHEILERKTGGL 322