BLASTX nr result

ID: Zingiber24_contig00022458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00022458
         (465 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564714.1| PREDICTED: probable ion channel POLLUX-like ...    82   6e-14
tpg|DAA56624.1| TPA: hypothetical protein ZEAMMB73_984910 [Zea m...    77   3e-12
tpg|DAA56623.1| TPA: putative ion channel protein POLLUX [Zea mays]    77   3e-12
ref|XP_002458836.1| hypothetical protein SORBIDRAFT_03g041120 [S...    76   5e-12
ref|XP_004970725.1| PREDICTED: probable ion channel POLLUX-like ...    74   3e-11
ref|XP_004970724.1| PREDICTED: probable ion channel POLLUX-like ...    74   3e-11
ref|NP_001044931.1| Os01g0870100 [Oryza sativa Japonica Group] g...    73   3e-11
dbj|BAD81711.1| putative DMI1 protein [Oryza sativa Japonica Gro...    73   3e-11

>ref|XP_003564714.1| PREDICTED: probable ion channel POLLUX-like [Brachypodium
           distachyon]
          Length = 940

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 52/121 (42%), Positives = 64/121 (52%), Gaps = 15/121 (12%)
 Frame = +3

Query: 129 RPQLKKSRTINXXXXXXXXHGSCPP----------LVRRAATATLPL-----PRKLTVAV 263
           RPQL KSRTI+          +             L RR+ TA LP      PR+LTVAV
Sbjct: 33  RPQLTKSRTISGSTAAAATAAASTAERGRGGRDSILARRSTTAPLPPAAALPPRRLTVAV 92

Query: 264 DNASDSPANGGVLDRDWFYPSFLGPYAARPRANSRAATVARPAPASSGTSKMELPLPPKR 443
           D+ S +  NGGVLDRDW YPSFLGP+A+RPR   +  T     P S+       P PP+R
Sbjct: 93  DDPSHAAPNGGVLDRDWCYPSFLGPHASRPRPPRQQQT-----PVSADRRNPNNPAPPRR 147

Query: 444 L 446
           +
Sbjct: 148 V 148


>tpg|DAA56624.1| TPA: hypothetical protein ZEAMMB73_984910 [Zea mays]
          Length = 681

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 52/135 (38%), Positives = 67/135 (49%), Gaps = 26/135 (19%)
 Frame = +3

Query: 129 RPQLKKSRTINXXXXXXXXHGSCPP---------------LVRRAATATLP--------- 236
           RPQL KSRTI+                             LVRR++TA LP         
Sbjct: 31  RPQLTKSRTISGSVAASILAADRVAGGGGGSGGGGLRDSILVRRSSTAPLPPYTASAAGA 90

Query: 237 --LPRKLTVAVDNASDSPANGGVLDRDWFYPSFLGPYAARPRANSRAATVARPAPASSGT 410
              PR+LTVAVD+ S +  NGGVLDRDW YPSFLGP+A+RPR   +  T       S+  
Sbjct: 91  SSAPRRLTVAVDDPSYAAPNGGVLDRDWCYPSFLGPHASRPRPPRQQQTATTTERRSANP 150

Query: 411 SKMELPLPPKRLVDR 455
           +   +P+PP+  V +
Sbjct: 151 T---VPVPPRVAVSQ 162


>tpg|DAA56623.1| TPA: putative ion channel protein POLLUX [Zea mays]
          Length = 955

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 52/135 (38%), Positives = 67/135 (49%), Gaps = 26/135 (19%)
 Frame = +3

Query: 129 RPQLKKSRTINXXXXXXXXHGSCPP---------------LVRRAATATLP--------- 236
           RPQL KSRTI+                             LVRR++TA LP         
Sbjct: 31  RPQLTKSRTISGSVAASILAADRVAGGGGGSGGGGLRDSILVRRSSTAPLPPYTASAAGA 90

Query: 237 --LPRKLTVAVDNASDSPANGGVLDRDWFYPSFLGPYAARPRANSRAATVARPAPASSGT 410
              PR+LTVAVD+ S +  NGGVLDRDW YPSFLGP+A+RPR   +  T       S+  
Sbjct: 91  SSAPRRLTVAVDDPSYAAPNGGVLDRDWCYPSFLGPHASRPRPPRQQQTATTTERRSANP 150

Query: 411 SKMELPLPPKRLVDR 455
           +   +P+PP+  V +
Sbjct: 151 T---VPVPPRVAVSQ 162


>ref|XP_002458836.1| hypothetical protein SORBIDRAFT_03g041120 [Sorghum bicolor]
           gi|241930811|gb|EES03956.1| hypothetical protein
           SORBIDRAFT_03g041120 [Sorghum bicolor]
          Length = 972

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 53/135 (39%), Positives = 68/135 (50%), Gaps = 26/135 (19%)
 Frame = +3

Query: 129 RPQLKKSRTINXXXXXXXXHGSCPP--------------LVRRAATATLP---------- 236
           RPQL KSRTI+                            LVRR++TA LP          
Sbjct: 31  RPQLTKSRTISGSAAASILAADRVGGGGGGGGGGLRDSILVRRSSTAPLPPSTASAAGAS 90

Query: 237 -LPRKLTVAVDNASDSPA-NGGVLDRDWFYPSFLGPYAARPRANSRAATVARPAPASSGT 410
             PR+LTVAVD+ S   A NGGVLDRDW YPSFLGP+A+RPR   +  T   P      +
Sbjct: 91  SAPRRLTVAVDDPSSYAAPNGGVLDRDWCYPSFLGPHASRPRPPRQQQT---PTTTDRRS 147

Query: 411 SKMELPLPPKRLVDR 455
           +   +P+PP+ +V +
Sbjct: 148 ANPTVPVPPRVVVSQ 162


>ref|XP_004970725.1| PREDICTED: probable ion channel POLLUX-like isoform X2 [Setaria
           italica]
          Length = 783

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 11/95 (11%)
 Frame = +3

Query: 204 LVRRAATATLP-----------LPRKLTVAVDNASDSPANGGVLDRDWFYPSFLGPYAAR 350
           LVRR++TA LP            PR+LTVAVD+ S +  NGGVLDRDW YPSFLGP+A+R
Sbjct: 71  LVRRSSTAPLPPPPASAAGPSPAPRRLTVAVDDPSYAAPNGGVLDRDWCYPSFLGPHASR 130

Query: 351 PRANSRAATVARPAPASSGTSKMELPLPPKRLVDR 455
           PR   +     +  P S+        +PP+  V +
Sbjct: 131 PRPTRQ----QQQTPTSADRPSANPTVPPRVAVSQ 161


>ref|XP_004970724.1| PREDICTED: probable ion channel POLLUX-like isoform X1 [Setaria
           italica]
          Length = 957

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 11/95 (11%)
 Frame = +3

Query: 204 LVRRAATATLP-----------LPRKLTVAVDNASDSPANGGVLDRDWFYPSFLGPYAAR 350
           LVRR++TA LP            PR+LTVAVD+ S +  NGGVLDRDW YPSFLGP+A+R
Sbjct: 71  LVRRSSTAPLPPPPASAAGPSPAPRRLTVAVDDPSYAAPNGGVLDRDWCYPSFLGPHASR 130

Query: 351 PRANSRAATVARPAPASSGTSKMELPLPPKRLVDR 455
           PR   +     +  P S+        +PP+  V +
Sbjct: 131 PRPTRQ----QQQTPTSADRPSANPTVPPRVAVSQ 161


>ref|NP_001044931.1| Os01g0870100 [Oryza sativa Japonica Group]
           gi|62286504|sp|Q5N941.1|POLLU_ORYSJ RecName:
           Full=Probable ion channel POLLUX; Short=OsPOLLUX;
           AltName: Full=Probable ion channel DMI1
           gi|56784215|dbj|BAD81710.1| putative DMI1 protein [Oryza
           sativa Japonica Group] gi|56784794|dbj|BAD82015.1|
           putative DMI1 protein [Oryza sativa Japonica Group]
           gi|113534462|dbj|BAF06845.1| Os01g0870100 [Oryza sativa
           Japonica Group]
          Length = 965

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 51/122 (41%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
 Frame = +3

Query: 129 RPQLKKSRTINXXXXXXXX-----HGSCPPLVRRAATATLP---LPRKL-TVAVDNASDS 281
           RPQL KSRTI+             + S   LVRR++TA LP    PR L TVAVD  S +
Sbjct: 29  RPQLTKSRTISGSAASAFDRWGTSNSSSSILVRRSSTAPLPPGAAPRGLLTVAVDEPSYA 88

Query: 282 PANGG--VLDRDWFYPSFLGPYAARPRANSRAATVARPAPASSGTSKMELPLPPKRLVDR 455
             NGG  +LDRDW YPSFLGP+A+RPR             A++  S+   P  P +    
Sbjct: 89  APNGGAAMLDRDWCYPSFLGPHASRPRPPRSQQQTPTTTAAAAADSRSPTPAAPPQTASV 148

Query: 456 SK 461
           S+
Sbjct: 149 SQ 150


>dbj|BAD81711.1| putative DMI1 protein [Oryza sativa Japonica Group]
           gi|56784795|dbj|BAD82016.1| putative DMI1 protein [Oryza
           sativa Japonica Group] gi|125528523|gb|EAY76637.1|
           hypothetical protein OsI_04591 [Oryza sativa Indica
           Group] gi|125572788|gb|EAZ14303.1| hypothetical protein
           OsJ_04229 [Oryza sativa Japonica Group]
          Length = 943

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 51/122 (41%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
 Frame = +3

Query: 129 RPQLKKSRTINXXXXXXXX-----HGSCPPLVRRAATATLP---LPRKL-TVAVDNASDS 281
           RPQL KSRTI+             + S   LVRR++TA LP    PR L TVAVD  S +
Sbjct: 29  RPQLTKSRTISGSAASAFDRWGTSNSSSSILVRRSSTAPLPPGAAPRGLLTVAVDEPSYA 88

Query: 282 PANGG--VLDRDWFYPSFLGPYAARPRANSRAATVARPAPASSGTSKMELPLPPKRLVDR 455
             NGG  +LDRDW YPSFLGP+A+RPR             A++  S+   P  P +    
Sbjct: 89  APNGGAAMLDRDWCYPSFLGPHASRPRPPRSQQQTPTTTAAAAADSRSPTPAAPPQTASV 148

Query: 456 SK 461
           S+
Sbjct: 149 SQ 150