BLASTX nr result
ID: Zingiber24_contig00022436
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00022436
(301 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar] 141 1e-31
ref|XP_003558524.1| PREDICTED: pre-mRNA-processing factor 39-lik... 120 2e-25
ref|XP_003625373.1| Pre-mRNA-processing factor [Medicago truncat... 120 2e-25
gb|EOX94326.1| Tetratricopeptide repeat (TPR)-like superfamily p... 119 4e-25
gb|EMT11610.1| Pre-mRNA-processing factor 39 [Aegilops tauschii] 119 5e-25
gb|EMJ00906.1| hypothetical protein PRUPE_ppa001458mg [Prunus pe... 117 1e-24
emb|CBI37184.3| unnamed protein product [Vitis vinifera] 117 1e-24
ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-lik... 117 1e-24
emb|CAN60862.1| hypothetical protein VITISV_027789 [Vitis vinifera] 117 1e-24
ref|XP_002465661.1| hypothetical protein SORBIDRAFT_01g043300 [S... 115 5e-24
gb|EXB46008.1| Pre-mRNA-processing factor 39 [Morus notabilis] 115 6e-24
ref|XP_004493823.1| PREDICTED: pre-mRNA-processing factor 39-lik... 115 6e-24
ref|XP_006651161.1| PREDICTED: pre-mRNA-processing factor 39-lik... 114 1e-23
gb|AFW89259.1| hypothetical protein ZEAMMB73_782851 [Zea mays] g... 114 1e-23
gb|AFW89258.1| hypothetical protein ZEAMMB73_782851 [Zea mays] 114 1e-23
gb|EEE58564.1| hypothetical protein OsJ_09874 [Oryza sativa Japo... 114 1e-23
ref|NP_001049340.1| Os03g0210400 [Oryza sativa Japonica Group] g... 114 1e-23
ref|XP_006443741.1| hypothetical protein CICLE_v10018866mg [Citr... 114 1e-23
ref|XP_006443740.1| hypothetical protein CICLE_v10018866mg [Citr... 114 1e-23
gb|ESW34589.1| hypothetical protein PHAVU_001G164500g [Phaseolus... 112 5e-23
>gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar]
Length = 823
Score = 141 bits (355), Expect = 1e-31
Identities = 70/100 (70%), Positives = 80/100 (80%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DYLS+ LWDEYIRYEES QAWSN+AMIYTRILENP+QQLDRYFNCFK LA + PLSEIR
Sbjct: 272 DYLSFLLWDEYIRYEESQQAWSNVAMIYTRILENPLQQLDRYFNCFKHLAASRPLSEIRT 331
Query: 121 AEEAGMVISTLETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
AEEA ++ S++E + GEV VEQSS +SAGLTE
Sbjct: 332 AEEAALLSSSVEFDGHGVEGEVCPDGVEQSSKAISAGLTE 371
>ref|XP_003558524.1| PREDICTED: pre-mRNA-processing factor 39-like [Brachypodium
distachyon]
Length = 724
Score = 120 bits (301), Expect = 2e-25
Identities = 59/93 (63%), Positives = 70/93 (75%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DY S LWDEYI+YEES QAWS+LA+IYTRILE+PIQQLDRYFNC KEL T LSEI
Sbjct: 173 DYRSNTLWDEYIKYEESLQAWSHLAVIYTRILEHPIQQLDRYFNCLKELTTTRNLSEILT 232
Query: 121 AEEAGMVISTLETGLESLHGEVHDGVVEQSSIP 23
AEE M +T+ET +++ GE H VE+S+ P
Sbjct: 233 AEETSMYGATVETSTQAVDGEAHPNDVEESAEP 265
>ref|XP_003625373.1| Pre-mRNA-processing factor [Medicago truncatula]
gi|355500388|gb|AES81591.1| Pre-mRNA-processing factor
[Medicago truncatula]
Length = 838
Score = 120 bits (300), Expect = 2e-25
Identities = 60/101 (59%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DYLS+ LWD+YI YE Q W+ LAMIYTRILENP QQLDRYFN FKELA+ PLSE+R
Sbjct: 285 DYLSFPLWDKYIEYEYMQQDWARLAMIYTRILENPNQQLDRYFNSFKELASNRPLSELRT 344
Query: 121 AEEAGMVISTLETGL-ESLHGEVHDGVVEQSSIPVSAGLTE 2
A+EA V + G+ + + GEVH + S P SAGLTE
Sbjct: 345 ADEAAAVAGVVSEGIDQGVEGEVHPDGADNSPKPASAGLTE 385
>gb|EOX94326.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 1 [Theobroma cacao] gi|508702431|gb|EOX94327.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 815
Score = 119 bits (298), Expect = 4e-25
Identities = 62/102 (60%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DYLS+ LWD+YI YE HQ WS LA+IYTRILENP QQLDRYFN FKELA + PL E+R
Sbjct: 262 DYLSFPLWDKYIEYEYMHQEWSRLAVIYTRILENPNQQLDRYFNSFKELAGSRPLPELRT 321
Query: 121 AEEAGMVISTL--ETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
AEEA S + E + GEVH V EQ+ PV+AG TE
Sbjct: 322 AEEAAANASAVVSEADGQVNEGEVHPDVAEQTPKPVTAGFTE 363
>gb|EMT11610.1| Pre-mRNA-processing factor 39 [Aegilops tauschii]
Length = 692
Score = 119 bits (297), Expect = 5e-25
Identities = 59/100 (59%), Positives = 69/100 (69%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DY S LWDEYI+YEES QAWSNLA++YTRILE+PIQQLDRYFNC KEL LSEI
Sbjct: 138 DYRSNTLWDEYIKYEESLQAWSNLAVVYTRILEHPIQQLDRYFNCLKELTATRSLSEILT 197
Query: 121 AEEAGMVISTLETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
AEE M T+E + L GE H VE+++ P + TE
Sbjct: 198 AEETSMYCLTVENSAQVLDGEAHPNDVEKTAEPEVSSSTE 237
>gb|EMJ00906.1| hypothetical protein PRUPE_ppa001458mg [Prunus persica]
Length = 823
Score = 117 bits (294), Expect = 1e-24
Identities = 61/101 (60%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DYLS+ LWD+YI YE Q W LAMIY+RILENP QQLDRYFN FKELA + PLSE+R
Sbjct: 266 DYLSFPLWDKYIEYEYMQQEWGRLAMIYSRILENPNQQLDRYFNSFKELAGSRPLSELRT 325
Query: 121 AEEAGMVISTLETGLESLHG-EVHDGVVEQSSIPVSAGLTE 2
AEEA + G + ++G EV V EQS PVS GLTE
Sbjct: 326 AEEAAVAAGAHSEGGDQVNGEEVGSDVAEQSPKPVSGGLTE 366
>emb|CBI37184.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 117 bits (294), Expect = 1e-24
Identities = 61/101 (60%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DYLSY LWD++I YE S Q WS LAMIYTRILENP QQLDRY N FKELA + PLSE+
Sbjct: 34 DYLSYPLWDKFIEYEYSQQEWSRLAMIYTRILENPNQQLDRYLNSFKELAGSRPLSELTT 93
Query: 121 AEEAGMVISTL-ETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
AEEA + + + GE VEQSS PVSAGLT+
Sbjct: 94 AEEAAATAGAFSDANGQGIEGEARPDEVEQSSKPVSAGLTD 134
>ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-like [Vitis vinifera]
Length = 832
Score = 117 bits (294), Expect = 1e-24
Identities = 61/101 (60%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DYLSY LWD++I YE S Q WS LAMIYTRILENP QQLDRY N FKELA + PLSE+
Sbjct: 277 DYLSYPLWDKFIEYEYSQQEWSRLAMIYTRILENPNQQLDRYLNSFKELAGSRPLSELTT 336
Query: 121 AEEAGMVISTL-ETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
AEEA + + + GE VEQSS PVSAGLT+
Sbjct: 337 AEEAAATAGAFSDANGQGIEGEARPDEVEQSSKPVSAGLTD 377
>emb|CAN60862.1| hypothetical protein VITISV_027789 [Vitis vinifera]
Length = 826
Score = 117 bits (294), Expect = 1e-24
Identities = 61/101 (60%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DYLSY LWD++I YE S Q WS LAMIYTRILENP QQLDRY N FKELA + PLSE+
Sbjct: 298 DYLSYPLWDKFIEYEYSQQEWSRLAMIYTRILENPNQQLDRYLNSFKELAGSRPLSELTT 357
Query: 121 AEEAGMVISTL-ETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
AEEA + + + GE VEQSS PVSAGLT+
Sbjct: 358 AEEAAATAGAFSDANGQGIEGEARPDEVEQSSKPVSAGLTD 398
>ref|XP_002465661.1| hypothetical protein SORBIDRAFT_01g043300 [Sorghum bicolor]
gi|241919515|gb|EER92659.1| hypothetical protein
SORBIDRAFT_01g043300 [Sorghum bicolor]
Length = 768
Score = 115 bits (289), Expect = 5e-24
Identities = 56/100 (56%), Positives = 72/100 (72%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DY S LWDEYI+YEES +AWS+LA+IYTR+LE+PIQQLDRYFNC KELA+ H SEI
Sbjct: 219 DYRSNILWDEYIKYEESLEAWSHLAVIYTRVLEHPIQQLDRYFNCLKELASKHSFSEILT 278
Query: 121 AEEAGMVISTLETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
AEEA + + T ET +++ GE H V++ P + T+
Sbjct: 279 AEEASVYVVTSETSVQAPDGEAHPDDVDKPGQPEISSSTD 318
>gb|EXB46008.1| Pre-mRNA-processing factor 39 [Morus notabilis]
Length = 934
Score = 115 bits (288), Expect = 6e-24
Identities = 63/111 (56%), Positives = 72/111 (64%), Gaps = 11/111 (9%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DYLS+ LWD+YI YE Q WS LAMIYTRILENP QQLDRYFN FKELA PLSE+R
Sbjct: 390 DYLSFPLWDKYIEYEYMQQEWSRLAMIYTRILENPNQQLDRYFNSFKELAGNRPLSELRT 449
Query: 121 AEEAGMV-----------ISTLETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
AEEA V +++ E + EVH +QS+ PVSAGLTE
Sbjct: 450 AEEAAAVTGASSEAAPATVASSEAADQVNGEEVHTEATDQSNKPVSAGLTE 500
>ref|XP_004493823.1| PREDICTED: pre-mRNA-processing factor 39-like [Cicer arietinum]
Length = 822
Score = 115 bits (288), Expect = 6e-24
Identities = 59/101 (58%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DYLS+ LWD+YI YE Q W+ LA+IYTRILENP QQLDRYF+ FKELA+ PLSE+R
Sbjct: 271 DYLSFPLWDKYIEYEYIQQDWARLALIYTRILENPNQQLDRYFSSFKELASNRPLSELRT 330
Query: 121 AEEAGMVISTLETGL-ESLHGEVHDGVVEQSSIPVSAGLTE 2
A+EA V + G +++ GEV E S PVSAGLTE
Sbjct: 331 ADEAAAVADVVSEGTGQAVEGEVRPDGAENSPKPVSAGLTE 371
>ref|XP_006651161.1| PREDICTED: pre-mRNA-processing factor 39-like [Oryza brachyantha]
Length = 722
Score = 114 bits (286), Expect = 1e-23
Identities = 58/97 (59%), Positives = 69/97 (71%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DY S LWDEYI+YEES QAWS+LA+IYTRILE+PIQQLDRYF+C KELA LSEI
Sbjct: 170 DYRSNILWDEYIKYEESLQAWSHLAIIYTRILEHPIQQLDRYFHCLKELAATRSLSEILT 229
Query: 121 AEEAGMVISTLETGLESLHGEVHDGVVEQSSIPVSAG 11
AEEA M I T E ++L GE H ++ + P +G
Sbjct: 230 AEEATMYIVTAENTAQTLDGETHTDDIDMPAQPEISG 266
>gb|AFW89259.1| hypothetical protein ZEAMMB73_782851 [Zea mays]
gi|413956611|gb|AFW89260.1| hypothetical protein
ZEAMMB73_782851 [Zea mays]
Length = 407
Score = 114 bits (286), Expect = 1e-23
Identities = 54/100 (54%), Positives = 72/100 (72%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DY S LWDEYI+YEES +AWS+LA+IYTR+LE+PIQQLDRYFNC KELA+ H SEI
Sbjct: 219 DYRSNILWDEYIKYEESLEAWSHLAVIYTRVLEHPIQQLDRYFNCLKELASKHSFSEILT 278
Query: 121 AEEAGMVISTLETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
AEEA + + T ET ++ G+ H ++++ P + L +
Sbjct: 279 AEEASVYVVTSETSAQAPDGDTHPDDIDKAGQPELSSLAD 318
>gb|AFW89258.1| hypothetical protein ZEAMMB73_782851 [Zea mays]
Length = 763
Score = 114 bits (286), Expect = 1e-23
Identities = 54/100 (54%), Positives = 72/100 (72%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DY S LWDEYI+YEES +AWS+LA+IYTR+LE+PIQQLDRYFNC KELA+ H SEI
Sbjct: 219 DYRSNILWDEYIKYEESLEAWSHLAVIYTRVLEHPIQQLDRYFNCLKELASKHSFSEILT 278
Query: 121 AEEAGMVISTLETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
AEEA + + T ET ++ G+ H ++++ P + L +
Sbjct: 279 AEEASVYVVTSETSAQAPDGDTHPDDIDKAGQPELSSLAD 318
>gb|EEE58564.1| hypothetical protein OsJ_09874 [Oryza sativa Japonica Group]
Length = 789
Score = 114 bits (286), Expect = 1e-23
Identities = 59/100 (59%), Positives = 70/100 (70%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DY S LWDEYI+YEES QAWS+LA+IYTRILE+PI QLDRYF+C KELA LSEI
Sbjct: 241 DYRSNILWDEYIKYEESLQAWSHLAIIYTRILEHPITQLDRYFHCLKELAATRSLSEILT 300
Query: 121 AEEAGMVISTLETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
+EEA M T E ++L GE G V+ S+ P +G TE
Sbjct: 301 SEEAAMYSVTAENTAQTLDGETQPGDVDMSAQPEISGSTE 340
>ref|NP_001049340.1| Os03g0210400 [Oryza sativa Japonica Group]
gi|108706795|gb|ABF94590.1| Pre-mRNA processing protein
prp39, putative, expressed [Oryza sativa Japonica Group]
gi|113547811|dbj|BAF11254.1| Os03g0210400 [Oryza sativa
Japonica Group]
Length = 789
Score = 114 bits (286), Expect = 1e-23
Identities = 59/100 (59%), Positives = 70/100 (70%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DY S LWDEYI+YEES QAWS+LA+IYTRILE+PI QLDRYF+C KELA LSEI
Sbjct: 241 DYRSNILWDEYIKYEESLQAWSHLAIIYTRILEHPITQLDRYFHCLKELAATRSLSEILT 300
Query: 121 AEEAGMVISTLETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
+EEA M T E ++L GE G V+ S+ P +G TE
Sbjct: 301 SEEAAMYSVTAENTAQTLDGETQPGDVDMSAQPEISGSTE 340
>ref|XP_006443741.1| hypothetical protein CICLE_v10018866mg [Citrus clementina]
gi|568851530|ref|XP_006479443.1| PREDICTED:
pre-mRNA-processing factor 39-like isoform X1 [Citrus
sinensis] gi|557546003|gb|ESR56981.1| hypothetical
protein CICLE_v10018866mg [Citrus clementina]
Length = 829
Score = 114 bits (285), Expect = 1e-23
Identities = 62/107 (57%), Positives = 71/107 (66%), Gaps = 7/107 (6%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DYLS+ LWD+YI YE Q WS +AMIYTRILENPIQQLDRYF+ FKE A + PLSE+R
Sbjct: 275 DYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFAASRPLSELRT 334
Query: 121 AEE-----AGMVISTLETGLESL--HGEVHDGVVEQSSIPVSAGLTE 2
AEE + + ETG E EV EQ+S PVSAGLTE
Sbjct: 335 AEEVDAAAVAVAAAPSETGAEVKVNEEEVQPDAAEQTSKPVSAGLTE 381
>ref|XP_006443740.1| hypothetical protein CICLE_v10018866mg [Citrus clementina]
gi|567902508|ref|XP_006443742.1| hypothetical protein
CICLE_v10018866mg [Citrus clementina]
gi|568851532|ref|XP_006479444.1| PREDICTED:
pre-mRNA-processing factor 39-like isoform X2 [Citrus
sinensis] gi|557546002|gb|ESR56980.1| hypothetical
protein CICLE_v10018866mg [Citrus clementina]
gi|557546004|gb|ESR56982.1| hypothetical protein
CICLE_v10018866mg [Citrus clementina]
Length = 828
Score = 114 bits (285), Expect = 1e-23
Identities = 62/107 (57%), Positives = 71/107 (66%), Gaps = 7/107 (6%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DYLS+ LWD+YI YE Q WS +AMIYTRILENPIQQLDRYF+ FKE A + PLSE+R
Sbjct: 275 DYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFAASRPLSELRT 334
Query: 121 AEE-----AGMVISTLETGLESL--HGEVHDGVVEQSSIPVSAGLTE 2
AEE + + ETG E EV EQ+S PVSAGLTE
Sbjct: 335 AEEVDAAAVAVAAAPSETGAEVKVNEEEVQPDAAEQTSKPVSAGLTE 381
>gb|ESW34589.1| hypothetical protein PHAVU_001G164500g [Phaseolus vulgaris]
Length = 828
Score = 112 bits (280), Expect = 5e-23
Identities = 58/100 (58%), Positives = 69/100 (69%)
Frame = -1
Query: 301 DYLSYQLWDEYIRYEESHQAWSNLAMIYTRILENPIQQLDRYFNCFKELATAHPLSEIRM 122
DYLS+ LWD+YI YE Q W+ LA+IYTRILENP QQLDRYF+ FKELA PLSE+R
Sbjct: 280 DYLSFPLWDKYIEYEYMQQDWARLAIIYTRILENPNQQLDRYFSSFKELAGNRPLSELRT 339
Query: 121 AEEAGMVISTLETGLESLHGEVHDGVVEQSSIPVSAGLTE 2
EEA + +++ G + GEVH E S VSAGLTE
Sbjct: 340 TEEAAVSVASEAAG-QGTEGEVHPDGAENSPKSVSAGLTE 378