BLASTX nr result
ID: Zingiber24_contig00022034
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00022034
(778 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japo... 101 2e-19
gb|EAZ24291.1| hypothetical protein OsJ_08043 [Oryza sativa Japo... 101 2e-19
gb|EAY87182.1| hypothetical protein OsI_08583 [Oryza sativa Indi... 101 2e-19
ref|XP_006647737.1| PREDICTED: DNA topoisomerase 2-like [Oryza b... 97 8e-18
ref|XP_003570162.1| PREDICTED: DNA topoisomerase 2-like [Brachyp... 95 3e-17
ref|XP_004953539.1| PREDICTED: DNA topoisomerase 2-like [Setaria... 91 6e-16
gb|EMS52816.1| DNA topoisomerase 2 [Triticum urartu] 91 6e-16
gb|EXB68160.1| DNA topoisomerase 2 [Morus notabilis] 88 4e-15
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984... 88 4e-15
gb|EMT03055.1| DNA topoisomerase 2 [Aegilops tauschii] 87 6e-15
emb|CBI24922.3| unnamed protein product [Vitis vinifera] 87 6e-15
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v... 87 6e-15
ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis... 87 8e-15
ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 85 3e-14
ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus comm... 84 5e-14
gb|EMS63570.1| DNA topoisomerase 2 [Triticum urartu] 83 9e-14
gb|EMT12025.1| hypothetical protein F775_52511 [Aegilops tauschii] 82 2e-13
ref|XP_002298421.2| DNA topoisomerase family protein [Populus tr... 81 5e-13
ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragari... 80 6e-13
ref|XP_002314046.2| DNA topoisomerase family protein [Populus tr... 80 1e-12
>dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japonica Group]
Length = 1525
Score = 101 bits (252), Expect = 2e-19
Identities = 74/172 (43%), Positives = 95/172 (55%), Gaps = 24/172 (13%)
Frame = -3
Query: 776 RAPAKKQTVEESD-EDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAK---KQPS 609
+ PAKK + + SD ED+E+LALKDRLAAYNLD ++ AMET+T +Q K K K+PS
Sbjct: 1281 KQPAKKASTQLSDDEDDEVLALKDRLAAYNLDDHSEDTAMETET-TEEQAKGKKGRKEPS 1339
Query: 608 RNAAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKNETGK-ATR 432
+ AAKKA L+ DDE E + + +G+KP E K ATR
Sbjct: 1340 KRGAAKKAISSLAVISDDE-EDETVPIDEDDEDDFAMEEVPVKKGRGKKPAAEKPKAATR 1398
Query: 431 KRGPAQ-------------------ASKATTTSQKVRKMRASPFNKKSGSVL 333
KR PAQ ++ A + +KVRKMRASPF+KKSGSVL
Sbjct: 1399 KRAPAQGKSMRQKVMEEMFKPTEDSSTSAPSPEKKVRKMRASPFHKKSGSVL 1450
>gb|EAZ24291.1| hypothetical protein OsJ_08043 [Oryza sativa Japonica Group]
Length = 1487
Score = 101 bits (252), Expect = 2e-19
Identities = 74/172 (43%), Positives = 95/172 (55%), Gaps = 24/172 (13%)
Frame = -3
Query: 776 RAPAKKQTVEESD-EDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAK---KQPS 609
+ PAKK + + SD ED+E+LALKDRLAAYNLD ++ AMET+T +Q K K K+PS
Sbjct: 1243 KQPAKKASTQLSDDEDDEVLALKDRLAAYNLDDHSEDTAMETET-TEEQAKGKKGRKEPS 1301
Query: 608 RNAAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKNETGK-ATR 432
+ AAKKA L+ DDE E + + +G+KP E K ATR
Sbjct: 1302 KRGAAKKAISSLAVISDDE-EDETVPIDEDDEDDFAMEEVPVKKGRGKKPAAEKPKAATR 1360
Query: 431 KRGPAQ-------------------ASKATTTSQKVRKMRASPFNKKSGSVL 333
KR PAQ ++ A + +KVRKMRASPF+KKSGSVL
Sbjct: 1361 KRAPAQGKSMRQKVMEEMFKPTEDSSTSAPSPEKKVRKMRASPFHKKSGSVL 1412
>gb|EAY87182.1| hypothetical protein OsI_08583 [Oryza sativa Indica Group]
Length = 1486
Score = 101 bits (252), Expect = 2e-19
Identities = 74/172 (43%), Positives = 95/172 (55%), Gaps = 24/172 (13%)
Frame = -3
Query: 776 RAPAKKQTVEESD-EDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAK---KQPS 609
+ PAKK + + SD ED+E+LALKDRLAAYNLD ++ AMET+T +Q K K K+PS
Sbjct: 1242 KQPAKKASTQLSDDEDDEVLALKDRLAAYNLDDHSEDTAMETET-TEEQAKGKKGRKEPS 1300
Query: 608 RNAAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKNETGK-ATR 432
+ AAKKA L+ DDE E + + +G+KP E K ATR
Sbjct: 1301 KRGAAKKAISSLAVISDDE-EDETVPIDEDDEDDFAMEEVPVKKGRGKKPAAEKPKAATR 1359
Query: 431 KRGPAQ-------------------ASKATTTSQKVRKMRASPFNKKSGSVL 333
KR PAQ ++ A + +KVRKMRASPF+KKSGSVL
Sbjct: 1360 KRAPAQGKSMRQKVMEEMFKPTEDSSTSAPSPEKKVRKMRASPFHKKSGSVL 1411
>ref|XP_006647737.1| PREDICTED: DNA topoisomerase 2-like [Oryza brachyantha]
Length = 1506
Score = 96.7 bits (239), Expect = 8e-18
Identities = 68/171 (39%), Positives = 92/171 (53%), Gaps = 23/171 (13%)
Frame = -3
Query: 776 RAPAKKQTVEESDEDE-EILALKDRLAAYNLDSSPDNGAMETDTV--VSDQGKAKKQPSR 606
+ P KK ++ SD++E E+LALKDRLAAY LD + ++ AMET+T + K KK+PS+
Sbjct: 1264 KQPVKKASIISSDDEEDEVLALKDRLAAYKLDDNSEDTAMETETAEEQTKTKKGKKEPSK 1323
Query: 605 NAAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKNETGK-ATRK 429
AAKKA L+ DD+ + + + +GRKP E K ATRK
Sbjct: 1324 RGAAKKALSSLAELSDDDEDATEPI--DKEDEEDFAMEVQVKKGRGRKPAAEKPKAATRK 1381
Query: 428 RGPAQ-------------------ASKATTTSQKVRKMRASPFNKKSGSVL 333
R PAQ ++ A + +KVRKMR SPF+KKSGSVL
Sbjct: 1382 RAPAQGKSMRQKVMEEIFKPTEDSSTSAPSPEKKVRKMRVSPFHKKSGSVL 1432
>ref|XP_003570162.1| PREDICTED: DNA topoisomerase 2-like [Brachypodium distachyon]
Length = 1494
Score = 94.7 bits (234), Expect = 3e-17
Identities = 70/170 (41%), Positives = 89/170 (52%), Gaps = 23/170 (13%)
Frame = -3
Query: 776 RAPAKKQTVEESDEDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAKK---QPSR 606
+ PAKK + + D ++EIL LKDRLAA NLDSSP++ MET+T + K KK +PS
Sbjct: 1257 KKPAKKASAQVKDAEDEILELKDRLAASNLDSSPEHIDMETETTEGPE-KGKKGVDEPSN 1315
Query: 605 NAAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKNETGK-ATRK 429
AAKKA L +D DE + + + +GRKP E K A RK
Sbjct: 1316 RGAAKKAMSSL-ADWSDEEDLTAPIHESEDEGFAMEEVQVEKKTRGRKPAAEKSKPAVRK 1374
Query: 428 RGPAQA-------------------SKATTTSQKVRKMRASPFNKKSGSV 336
R PAQ+ + A + +KVRKMRASPFNKKSGSV
Sbjct: 1375 RAPAQSKGMRQKVMEEIFKPTDDSTTSAPSPVKKVRKMRASPFNKKSGSV 1424
>ref|XP_004953539.1| PREDICTED: DNA topoisomerase 2-like [Setaria italica]
Length = 1480
Score = 90.5 bits (223), Expect = 6e-16
Identities = 67/160 (41%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = -3
Query: 767 AKKQTVEESDEDEEIL-ALKDRLAAYNL-DSSPDNGAMETDTVVSD-QGKAKKQPSRNAA 597
+KK + DEDE+ L LK+RLAA+NL DSSPDN AMET+T GK KK S+
Sbjct: 1252 SKKASAPPVDEDEDDLPTLKERLAAFNLNDSSPDNSAMETETTEEQIGGKGKKGVSKRGG 1311
Query: 596 AKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKNETGKATRKRGPA 417
KKA+ L+ DDE E + KPK ATRKR PA
Sbjct: 1312 GKKASSSLAVIHDDEDEDVDVSLEVPEEVQGPKKGRGRKPAAPVKPK---ATATRKRAPA 1368
Query: 416 QA------------SKATTTSQKVRKMRASPFNKKSGSVL 333
Q + A + +KVRKMR SPFNKKSGS+L
Sbjct: 1369 QGKAMMLKPTEDSNTSAPSPEKKVRKMRESPFNKKSGSIL 1408
>gb|EMS52816.1| DNA topoisomerase 2 [Triticum urartu]
Length = 1512
Score = 90.5 bits (223), Expect = 6e-16
Identities = 69/172 (40%), Positives = 89/172 (51%), Gaps = 25/172 (14%)
Frame = -3
Query: 773 APAKKQTVEESDEDEEILALKDRLAAYNL-DSSPDNGAMETDTVVSDQGKAKK---QPSR 606
AP K + +ED+E+ LKDRLAAYNL DSSP+ AMET+ +Q KAKK PS+
Sbjct: 1283 APKKASAPVKDEEDDEVAHLKDRLAAYNLDDSSPEPSAMETE----EQQKAKKGRNGPSK 1338
Query: 605 NAAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKNETGKAT--R 432
AAKKA L+ +D++ + P KGRKP E KAT R
Sbjct: 1339 RGAAKKAMSSLAESDDEDMAE-----PHHESEGGESSMELEKKTKGRKPAAEKPKATTIR 1393
Query: 431 KRGPAQAS-------------------KATTTSQKVRKMRASPFNKKSGSVL 333
KR PAQ+ A + +KVR++R+SPFNKKSGS+L
Sbjct: 1394 KRAPAQSKVMKQKVMEEILKPTDDSNLSAPSPEKKVRRIRSSPFNKKSGSLL 1445
>gb|EXB68160.1| DNA topoisomerase 2 [Morus notabilis]
Length = 1451
Score = 87.8 bits (216), Expect = 4e-15
Identities = 65/181 (35%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Frame = -3
Query: 776 RAPAKKQTVEESDEDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAKKQPSRNAA 597
+A +K ++ D+D+E+LALKDRLAAYNLDSSPD + E DT KK P++ AA
Sbjct: 1206 KAASKVVVEDDDDDDDEVLALKDRLAAYNLDSSPDKSS-EMDTEAPQVPVPKKAPTKRAA 1264
Query: 596 AKKATYV-------LSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKP------- 459
A+K T L D+DDE + + G+KP
Sbjct: 1265 AQKKTLATVSETVNLDDDDDDEIDGDEDF-----ELESTAPAKAAAKKGGKKPAVSTKAV 1319
Query: 458 -KNETGKATRKRGPAQ------------------ASKATTTSQKVRKMRASPFNKKSGSV 336
K AT++RG A + + +KVRKMRASPFNKKSGSV
Sbjct: 1320 SKAPAAAATKRRGAANKEPQVLGQKLLTDMLKPAENSGLSPEKKVRKMRASPFNKKSGSV 1379
Query: 335 L 333
L
Sbjct: 1380 L 1380
>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
DNA topoisomerase II [Nicotiana tabacum]
Length = 1482
Score = 87.8 bits (216), Expect = 4e-15
Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 28/176 (15%)
Frame = -3
Query: 776 RAPAKKQTV----EESDEDEEILALKDRLAAYNLDSSPDNG--AMETDTVVSDQGKAKKQ 615
+APAK + + EE +ED+E+LALKDRLAAYNL+SSPD+ AMET+ + KK
Sbjct: 1233 KAPAKAKPIAVEDEEEEEDDEVLALKDRLAAYNLNSSPDHSAEAMETEAPKAQ----KKA 1288
Query: 614 PSRNAAAKKATYVLSSD----------EDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGR 465
P+R AAAKK T +D DD+ + + + +
Sbjct: 1289 PTRKAAAKKKTLPSIADVSEGEDEIEISDDDESEPEVAVGGKKKGGRKPATAKAAPAAAK 1348
Query: 464 KPKNETGKATRKR------------GPAQASKATTTSQKVRKMRASPFNKKSGSVL 333
+P + G A ++ PA+ + ++ +KVRKMRASPFN+KSG+VL
Sbjct: 1349 QPPKKRGPANKQAVGIGQKLITSILKPAENTDNSSPEKKVRKMRASPFNEKSGAVL 1404
>gb|EMT03055.1| DNA topoisomerase 2 [Aegilops tauschii]
Length = 1471
Score = 87.0 bits (214), Expect = 6e-15
Identities = 64/168 (38%), Positives = 84/168 (50%), Gaps = 22/168 (13%)
Frame = -3
Query: 770 PAKKQTVEESDEDEEILALKDRLAAYNL-DSSPDNGAMETDTVVSDQGKAKKQPSRNAAA 594
P K + +ED+E+ LKDRLAAYNL DSSP+ AMET+ + K + PS+ AA
Sbjct: 1187 PKKASAPVKDEEDDELAVLKDRLAAYNLEDSSPEPNAMETEQQQKGK-KGRNGPSKRGAA 1245
Query: 593 KKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKNETGKAT--RKRGP 420
KKA L+ D++ + P KGRKP E KAT RKR P
Sbjct: 1246 KKAMSSLAESSDEDMAE-----PRHESEGGGSSMEVEKKTKGRKPAAEKPKATTIRKRAP 1300
Query: 419 AQAS-------------------KATTTSQKVRKMRASPFNKKSGSVL 333
AQ+ A + +KVR++R+SPFNKKSGS+L
Sbjct: 1301 AQSKVMKQKVMEEIFKPTDDSNLSAPSPEKKVRRIRSSPFNKKSGSLL 1348
>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
Length = 1452
Score = 87.0 bits (214), Expect = 6e-15
Identities = 64/175 (36%), Positives = 89/175 (50%), Gaps = 27/175 (15%)
Frame = -3
Query: 776 RAPAKKQ----TVEESDEDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAKKQPS 609
+APAKK+ +V + ++D+E+ LK+RLAAYNL+SSPD A V KK+PS
Sbjct: 1208 KAPAKKKEMPTSVLKDEDDDEVHELKERLAAYNLESSPDGSAAMEAEVPQVPAARKKEPS 1267
Query: 608 RNAAAKKA-----TYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKP----- 459
R AAA+K T + DEDDE + + + + KP
Sbjct: 1268 RRAAAQKKPLASFTEISDDDEDDEDFEVEEVSASDVKKKGGRKPAANAKAAAAKPAAAAA 1327
Query: 458 KNETGKATRKR-------------GPAQASKATTTSQKVRKMRASPFNKKSGSVL 333
KN+ G A +++ PA+ + + +KVRKMRASPFNKKSGSVL
Sbjct: 1328 KNKRGAANKQQPQLLGQTLLTEIFKPAE-TLGISPEKKVRKMRASPFNKKSGSVL 1381
>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
Length = 1489
Score = 87.0 bits (214), Expect = 6e-15
Identities = 64/175 (36%), Positives = 89/175 (50%), Gaps = 27/175 (15%)
Frame = -3
Query: 776 RAPAKKQ----TVEESDEDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAKKQPS 609
+APAKK+ +V + ++D+E+ LK+RLAAYNL+SSPD A V KK+PS
Sbjct: 1245 KAPAKKKEMPTSVLKDEDDDEVHELKERLAAYNLESSPDGSAAMEAEVPQVPAARKKEPS 1304
Query: 608 RNAAAKKA-----TYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKP----- 459
R AAA+K T + DEDDE + + + + KP
Sbjct: 1305 RRAAAQKKPLASFTEISDDDEDDEDFEVEEVSASDVKKKGGRKPAANAKAAAAKPAAAAA 1364
Query: 458 KNETGKATRKR-------------GPAQASKATTTSQKVRKMRASPFNKKSGSVL 333
KN+ G A +++ PA+ + + +KVRKMRASPFNKKSGSVL
Sbjct: 1365 KNKRGAANKQQPQLLGQTLLTEIFKPAE-TLGISPEKKVRKMRASPFNKKSGSVL 1418
>ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus]
Length = 1459
Score = 86.7 bits (213), Expect = 8e-15
Identities = 63/173 (36%), Positives = 86/173 (49%), Gaps = 25/173 (14%)
Frame = -3
Query: 776 RAPAKKQTV------EESDEDEEILALKDRLAAYNLDSSPDN---GAMETDT-VVSDQGK 627
+APAKK+ +E DED+E+L LKDRLAAY ++SSP+ AMET+ V Q
Sbjct: 1213 KAPAKKKGKAAVLDDDEDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAA 1272
Query: 626 AKKQPSRNAAAKKATYV------LSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGR 465
KK+PS+ A AKK T +S D++D + + + P G
Sbjct: 1273 KKKEPSKRAPAKKKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGRKAAAGN 1332
Query: 464 KPKNETGKATRKRG---------PAQASKATTTSQKVRKMRASPFNKKSGSVL 333
+ A K G PA + + +KVRK+RASPFNKKSGS+L
Sbjct: 1333 SKTTKPPAAGAKLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLL 1385
>ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis
sativus]
Length = 1460
Score = 84.7 bits (208), Expect = 3e-14
Identities = 64/174 (36%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
Frame = -3
Query: 776 RAPAKKQTV------EESDEDEEILALKDRLAAYNLDSSPDN---GAMETDT-VVSDQGK 627
+APAKK+ +E DED+E+L LKDRLAAY ++SSP+ AMET+ V Q
Sbjct: 1213 KAPAKKKGKAAVLDDDEDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAA 1272
Query: 626 AKKQPSRNAAAKKATYVLSS-------DEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKG 468
KK+PS+ A AKK T S+ D D + E ++ P G
Sbjct: 1273 KKKEPSKRAPAKKKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAAG 1332
Query: 467 RKPKNETGKATRKRG---------PAQASKATTTSQKVRKMRASPFNKKSGSVL 333
+ A K G PA + + +KVRK+RASPFNKKSGS+L
Sbjct: 1333 NSKTTKPPAAGAKLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLL 1386
>ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus communis]
gi|223543074|gb|EEF44609.1| DNA topoisomerase II,
putative [Ricinus communis]
Length = 1212
Score = 84.0 bits (206), Expect = 5e-14
Identities = 70/182 (38%), Positives = 88/182 (48%), Gaps = 34/182 (18%)
Frame = -3
Query: 776 RAPAKKQ---TVEESDEDEEILALKDRLAAYNLDSSPDNG-AMETDTVVSDQGKAKKQPS 609
+APAKKQ T DED+E+ ALKDRL AY LDSSP+ METD Q A+K+ S
Sbjct: 962 KAPAKKQEKPTPISDDEDDEVEALKDRLKAYRLDSSPEQSTTMETD---MPQVPARKETS 1018
Query: 608 RNAAAKKATYV----LSSDEDD---EPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKNE 450
+ AAA+K LS ED+ + E ++P GRKP
Sbjct: 1019 KRAAAQKKPVATISELSESEDEVDLDDESDVEVVPV----------PEAKKKGGRKPAAN 1068
Query: 449 TGKA-----TRKRGPAQ------------------ASKATTTSQKVRKMRASPFNKKSGS 339
+ A T+KRGP + + + +KVRKMRASPFNKKSGS
Sbjct: 1069 SRAAKPPAGTKKRGPTKKESQGLGQKLLTEMLKPAENPGISPEKKVRKMRASPFNKKSGS 1128
Query: 338 VL 333
VL
Sbjct: 1129 VL 1130
>gb|EMS63570.1| DNA topoisomerase 2 [Triticum urartu]
Length = 1449
Score = 83.2 bits (204), Expect = 9e-14
Identities = 72/180 (40%), Positives = 90/180 (50%), Gaps = 32/180 (17%)
Frame = -3
Query: 776 RAPAKKQTV----EESDEDEEILALKDRLAAYNLDS--SPDNGAMETDTVVSDQGKAKK- 618
+ P KK + E DE++E+ LKDRLAAYN+DS SP+ AMET+ +Q K KK
Sbjct: 1215 KPPPKKASAPVKDEVKDEEDEVAELKDRLAAYNIDSDNSPEPSAMETE----EQQKGKKG 1270
Query: 617 --QPSRNAAAKKATYVLS--SDED-DEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKN 453
PS+ AAKKA L+ SDED EP+++ KGRKP
Sbjct: 1271 RNGPSKRGAAKKAMSSLAEISDEDIAEPDRES--------DDGGSSMEVEKKTKGRKPAA 1322
Query: 452 ETGKAT-RKRGPAQAS-------------------KATTTSQKVRKMRASPFNKKSGSVL 333
E K T RKR PAQ A + +KVR++R SPFNKKSGSVL
Sbjct: 1323 EKPKTTIRKRAPAQTKGMRQKVMEEIFKPTDDSTLSAPSPEKKVRRIRDSPFNKKSGSVL 1382
>gb|EMT12025.1| hypothetical protein F775_52511 [Aegilops tauschii]
Length = 1498
Score = 82.0 bits (201), Expect = 2e-13
Identities = 68/177 (38%), Positives = 86/177 (48%), Gaps = 29/177 (16%)
Frame = -3
Query: 776 RAPAKKQTV----EESDEDEEILALKDRLAAYNLDS--SPDNGAMETDTVVSDQGKAKK- 618
+ P KK + E DE++E+ LKDRLAAYN+DS SP+ AMET+ +Q K KK
Sbjct: 1263 KPPPKKASAPVKDEVKDEEDEVAELKDRLAAYNIDSDNSPEPSAMETE----EQQKGKKG 1318
Query: 617 --QPSRNAAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKNETG 444
PS+ AAKKA L+ D++ + P KGRKP E
Sbjct: 1319 WNGPSKRGAAKKAMSSLAEISDEDVAE-----PDHESDDGGSSMEVEKKTKGRKPAAEKL 1373
Query: 443 KAT-RKRGPAQAS-------------------KATTTSQKVRKMRASPFNKKSGSVL 333
K T RKR PAQ A + +KVR++R SPFNKKSGSVL
Sbjct: 1374 KTTIRKRAPAQTKGMRQKVMEEIFKPTDDSTLSAPSPEKKVRRIRDSPFNKKSGSVL 1430
>ref|XP_002298421.2| DNA topoisomerase family protein [Populus trichocarpa]
gi|550348289|gb|EEE83226.2| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 1485
Score = 80.9 bits (198), Expect = 5e-13
Identities = 63/171 (36%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Frame = -3
Query: 776 RAPAKKQTVEE--SDEDEEILALKDRLAAYNLDSSPDNGA-METDTVVSDQGKAKKQPSR 606
+APAKKQ SDED+EI +LKDRL AY LDSSP+ A MET+ + G R
Sbjct: 1257 KAPAKKQEKPSPISDEDDEIESLKDRLKAYRLDSSPEQSADMETEVLRVPAG-------R 1309
Query: 605 NAAAKKATYVLS--SDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKNETGKATR 432
AA KK +S SD +DEP+ + + AT+
Sbjct: 1310 KAARKKPLAAVSVISDSEDEPDLDDDFDVQVKAVPETKKKGGRKAAAANDKAAKPPAATK 1369
Query: 431 KRGPAQ------------------ASKATTTSQKVRKMRASPFNKKSGSVL 333
+RGPA + +KVRKMRASPFNKKSGS+L
Sbjct: 1370 RRGPASKQSQGLGQQLLTEMLKPAEESGISPEKKVRKMRASPFNKKSGSLL 1420
>ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragaria vesca subsp. vesca]
Length = 1469
Score = 80.5 bits (197), Expect = 6e-13
Identities = 63/172 (36%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Frame = -3
Query: 776 RAPAKKQT-----VEESDEDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAKKQP 612
+APAKKQ + + D+DEE+L LKDRLAAYNLDSSPD +T V + KK+
Sbjct: 1244 KAPAKKQVKSTVVLSDDDDDEEMLDLKDRLAAYNLDSSPDK-----ETEVPLKPAQKKEA 1298
Query: 611 SRNAAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKP---KNETGK 441
S+ A K D+DD+ E + P KP + G
Sbjct: 1299 SKKATLKDD----EDDDDDDFEVEIAAAPAAVKKGGRKPAGAAKAAAAAKPPVAAKKRGA 1354
Query: 440 ATRK----------------RGPAQASKATTTSQKVRKMRASPFNKKSGSVL 333
A +K PA S + KVRKMR SPFNKKSGSVL
Sbjct: 1355 AAKKDTQTSSSSGQKLLTDMLKPAAESSGVSPDPKVRKMRESPFNKKSGSVL 1406
>ref|XP_002314046.2| DNA topoisomerase family protein [Populus trichocarpa]
gi|550331162|gb|EEE88001.2| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 1482
Score = 79.7 bits (195), Expect = 1e-12
Identities = 60/173 (34%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Frame = -3
Query: 776 RAPAKKQ----TVEESDEDEEILALKDRLAAYNLDSSPDNGA-METDT--VVSDQGKAKK 618
+APAK + +++ DED+EI +LKDRL AY LDSSP+ A METD V + +G A+K
Sbjct: 1248 KAPAKMEKLSPVLDDFDEDDEIESLKDRLNAYRLDSSPEQSADMETDVLQVPARRGAARK 1307
Query: 617 QPSRNAAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXKGRKPKNETGKA 438
+P N + + SD +DEP + + A
Sbjct: 1308 KPLANVS-------VISDSEDEPNLDDDADVEVKALPETKKKGGRKAAAANDKAAKPPAA 1360
Query: 437 TRKRGPAQASK------------------ATTTSQKVRKMRASPFNKKSGSVL 333
T++RGPA + +KVRK+RASPFNKKSGSVL
Sbjct: 1361 TKRRGPASQQSQGLGQKLLTEMLKPAEGAGISPEKKVRKVRASPFNKKSGSVL 1413