BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00022033
         (857 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001169599.1| hypothetical protein [Zea mays] gi|224030299...   195   2e-47
gb|ACN33432.1| unknown [Zea mays]                                     194   4e-47
ref|XP_002460941.1| hypothetical protein SORBIDRAFT_02g037890 [S...   189   8e-46
sp|A2YN56.1|SHR1_ORYSI RecName: Full=Protein SHORT-ROOT 1; AltNa...   188   2e-45
dbj|BAC20900.1| short-root protein-like [Oryza sativa Japonica G...   186   1e-44
gb|EEE67495.1| hypothetical protein OsJ_24926 [Oryza sativa Japo...   186   1e-44
ref|NP_001060133.1| Os07g0586900 [Oryza sativa Japonica Group] g...   186   1e-44
ref|XP_004958171.1| PREDICTED: protein SHORT-ROOT 1-like [Setari...   182   1e-43
tpg|DAA41268.1| TPA: hypothetical protein ZEAMMB73_913831 [Zea m...   181   2e-43
dbj|BAK02177.1| predicted protein [Hordeum vulgare subsp. vulgare]    180   7e-43
ref|XP_003562791.1| PREDICTED: protein SHORT-ROOT 1-like [Brachy...   179   9e-43
ref|XP_004983931.1| PREDICTED: protein SHORT-ROOT 2-like [Setari...   172   1e-40
tpg|DAA45910.1| TPA: hypothetical protein ZEAMMB73_781034 [Zea m...   172   1e-40
ref|XP_002467655.1| hypothetical protein SORBIDRAFT_01g031720 [S...   170   5e-40
sp|A2XIA8.1|SHR2_ORYSI RecName: Full=Protein SHORT-ROOT 2; AltNa...   167   6e-39
ref|NP_001173487.1| Os03g0433200 [Oryza sativa Japonica Group] g...   167   6e-39
gb|EMS45550.1| hypothetical protein TRIUR3_26966 [Triticum urartu]    154   5e-35
gb|EEE59318.1| hypothetical protein OsJ_11379 [Oryza sativa Japo...   146   8e-33
ref|XP_003611578.1| GRAS family transcription factor [Medicago t...   142   2e-31
ref|XP_004511835.1| PREDICTED: protein SHORT-ROOT-like [Cicer ar...   140   5e-31

>ref|NP_001169599.1| hypothetical protein [Zea mays] gi|224030299|gb|ACN34225.1| unknown
           [Zea mays] gi|414887363|tpg|DAA63377.1| TPA:
           hypothetical protein ZEAMMB73_763916 [Zea mays]
          Length = 592

 Score =  195 bits (496), Expect = 2e-47
 Identities = 135/284 (47%), Positives = 148/284 (52%), Gaps = 58/284 (20%)
 Frame = -3

Query: 678 MDTLFRLFSPQSNSHRQXXXXXXXXXXXXXXXXXXXLHQIN---------------GG-- 550
           MDTLFRL S Q++  +Q                    HQ N               GG  
Sbjct: 1   MDTLFRLVSLQASEQQQQQSASYNSRSTTSSGSRSSSHQTNASYNYYYHSNSSGGGGGQY 60

Query: 549 YYLEQPDYSFPHQDPY--SYRDQECGTNHHGLFMDEDFXXXXXSK-HLGGH----RPP-- 397
           YY +Q  +   HQ  Y   Y+ +ECG  HH L+MDEDF     S+ H   H    +PP  
Sbjct: 61  YYGQQHPHQHQHQQYYLEPYQQEECGNTHH-LYMDEDFSSSSSSRQHFHSHGAVVQPPTS 119

Query: 396 --ATPT------------------------LVFDPXXXXADLNLDVFXXXXXXXXXXXXX 295
             ATPT                        L F P     DLNLD               
Sbjct: 120 STATPTAPTPSLSTSSTAAGAAHALFEAADLSFPP-----DLNLDFSSPASSSGGGAASS 174

Query: 294 XXG------RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQGL 133
                    RWASQLLLECARAVA RD+QR QQL WMLNELASPYGD EQK+A+YFLQGL
Sbjct: 175 AAVGGGGGGRWASQLLLECARAVAGRDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGL 234

Query: 132 FARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           FARLTASG RTLRTLAAASDRN SFDS RRTALRFQELSPWSSF
Sbjct: 235 FARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSF 278


>gb|ACN33432.1| unknown [Zea mays]
          Length = 592

 Score =  194 bits (492), Expect = 4e-47
 Identities = 134/284 (47%), Positives = 148/284 (52%), Gaps = 58/284 (20%)
 Frame = -3

Query: 678 MDTLFRLFSPQSNSHRQXXXXXXXXXXXXXXXXXXXLHQIN---------------GG-- 550
           MDTLFRL S Q++  +Q                    HQ N               GG  
Sbjct: 1   MDTLFRLVSLQASEQQQQQSASYNSRSTTSSGSRSSSHQTNASYNYYYHSNSSGGGGGQY 60

Query: 549 YYLEQPDYSFPHQDPY--SYRDQECGTNHHGLFMDEDFXXXXXSK-HLGGH----RPP-- 397
           YY +Q  +   HQ  Y   Y+ +ECG  HH L+MDEDF     S+ H   H    +PP  
Sbjct: 61  YYGQQHPHQHQHQQYYLEPYQQEECGNTHH-LYMDEDFSSSSSSRQHFHSHGAVVQPPTS 119

Query: 396 --ATPT------------------------LVFDPXXXXADLNLDVFXXXXXXXXXXXXX 295
             ATPT                        L F P     DLNLD               
Sbjct: 120 STATPTAPTPSLSTSSTAAGAAHALFEAADLSFPP-----DLNLDFSSPASSSGGGAASS 174

Query: 294 XXG------RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQGL 133
                    RWASQLLL+CARAVA RD+QR QQL WMLNELASPYGD EQK+A+YFLQGL
Sbjct: 175 AAVGGGGGGRWASQLLLKCARAVAGRDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGL 234

Query: 132 FARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           FARLTASG RTLRTLAAASDRN SFDS RRTALRFQELSPWSSF
Sbjct: 235 FARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSF 278


>ref|XP_002460941.1| hypothetical protein SORBIDRAFT_02g037890 [Sorghum bicolor]
           gi|241924318|gb|EER97462.1| hypothetical protein
           SORBIDRAFT_02g037890 [Sorghum bicolor]
          Length = 598

 Score =  189 bits (481), Expect = 8e-46
 Identities = 132/285 (46%), Positives = 145/285 (50%), Gaps = 59/285 (20%)
 Frame = -3

Query: 678 MDTLFRLFSPQSNSHRQXXXXXXXXXXXXXXXXXXXL---HQIN---------------- 556
           MDTLFRL S Q++  +Q                       HQ N                
Sbjct: 1   MDTLFRLVSLQASEQQQQQQQQSASYNSRSTTSSGSRSSSHQTNASYNYYYHSTSSGGGG 60

Query: 555 --GGYYLEQPDYSFPHQDPY--SYRDQECGTNHHGLFMDEDFXXXXXSK-HLGGH----R 403
             GG Y     +   HQ  Y   Y+ +ECG  HH L+MDEDF     S+ H   H    +
Sbjct: 61  GGGGQYYYGQQHQHQHQQYYLEPYQQEECGNAHH-LYMDEDFSSSSSSRQHFHSHGAAVQ 119

Query: 402 PP----ATPTLVFDPXXXXA-------------------DLNLDVFXXXXXXXXXXXXXX 292
           PP    ATPT    P    +                   DLNLD                
Sbjct: 120 PPTSSAATPTAPTPPLSTSSTAAGAAHALFEAADLSFPPDLNLDFSSPASSSGGGAASSA 179

Query: 291 XG--------RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQG 136
                     RWASQLLLECARAVAARD+QR QQL WMLNELASPYGD EQK+A+YFLQG
Sbjct: 180 AVGVGGGGGGRWASQLLLECARAVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQG 239

Query: 135 LFARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           LFARLTASG RTLRTLAAASDRN SFDS RRTALRFQELSPWSSF
Sbjct: 240 LFARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSF 284


>sp|A2YN56.1|SHR1_ORYSI RecName: Full=Protein SHORT-ROOT 1; AltName: Full=OsSHR1
           gi|125558981|gb|EAZ04517.1| hypothetical protein
           OsI_26668 [Oryza sativa Indica Group]
          Length = 602

 Score =  188 bits (477), Expect = 2e-45
 Identities = 134/292 (45%), Positives = 149/292 (51%), Gaps = 66/292 (22%)
 Frame = -3

Query: 678 MDTLFRLFSPQSNSHRQXXXXXXXXXXXXXXXXXXXL---HQIN---------------- 556
           MDTLFRL S Q+ S +Q                       HQ N                
Sbjct: 1   MDTLFRLVSLQAASEQQQQQQQSASYNSRSTTSSGSRSSSHQTNASYSYYHHSSNSGGGG 60

Query: 555 ---GGYYL---EQPDYSFPHQDPYSYRDQECGTN-HHGLFMDEDFXXXXXSKH------L 415
              GGYY    + P   + + +PY    +ECG   HH L+MDEDF     S+H      +
Sbjct: 61  GGGGGYYYGGQQPPPSQYYYLEPYQ---EECGNAPHHQLYMDEDFSSSSSSRHFHHGAPV 117

Query: 414 GGHRPPA--TPT--------------------------LVFDPXXXXADLNLDVFXXXXX 319
              +PPA  TPT                          L F P     DLNLD       
Sbjct: 118 QQQQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPP-----DLNLDFSSPASS 172

Query: 318 XXXXXXXXXXG------RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKV 157
                            RWASQLLLECAR+VAARD+QR QQL WMLNELASPYGD EQK+
Sbjct: 173 SGGGTASSGAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKL 232

Query: 156 AAYFLQGLFARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           A+YFLQGLFARLTASGQRTLRTLAAASDRN SFDS RRTALRFQELSPWSSF
Sbjct: 233 ASYFLQGLFARLTASGQRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSF 284


>dbj|BAC20900.1| short-root protein-like [Oryza sativa Japonica Group]
           gi|50509213|dbj|BAD30442.1| short-root protein-like
           [Oryza sativa Japonica Group]
          Length = 629

 Score =  186 bits (471), Expect = 1e-44
 Identities = 133/292 (45%), Positives = 148/292 (50%), Gaps = 66/292 (22%)
 Frame = -3

Query: 678 MDTLFRLFSPQSNSHRQXXXXXXXXXXXXXXXXXXXL---HQIN---------------- 556
           MDTLFRL S Q+ S +Q                       HQ N                
Sbjct: 28  MDTLFRLVSLQAASEQQQQQQQSASYNSRSTTSSGSRSSSHQTNASYSYYHHSSNSGGGG 87

Query: 555 ---GGYYL---EQPDYSFPHQDPYSYRDQECGTN-HHGLFMDEDFXXXXXSKH------L 415
              GGYY    + P   + + +PY    +ECG   HH L+MDEDF     S+H      +
Sbjct: 88  GGGGGYYYGGQQPPPSQYYYLEPYQ---EECGNAPHHQLYMDEDFSSSSSSRHFHHGARV 144

Query: 414 GGHRPPA--TPT--------------------------LVFDPXXXXADLNLDVFXXXXX 319
              +PPA  TPT                          L F P     DLNLD       
Sbjct: 145 QQQQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPP-----DLNLDFSSPASS 199

Query: 318 XXXXXXXXXXG------RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKV 157
                            RWASQLLLECAR+VAARD+QR QQL WMLNELASPYGD EQK+
Sbjct: 200 SGGGTASSGAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKL 259

Query: 156 AAYFLQGLFARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           A+YFLQGLFARLTASG RTLRTLAAASDRN SFDS RRTALRFQELSPWSSF
Sbjct: 260 ASYFLQGLFARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSF 311


>gb|EEE67495.1| hypothetical protein OsJ_24926 [Oryza sativa Japonica Group]
          Length = 584

 Score =  186 bits (471), Expect = 1e-44
 Identities = 133/292 (45%), Positives = 148/292 (50%), Gaps = 66/292 (22%)
 Frame = -3

Query: 678 MDTLFRLFSPQSNSHRQXXXXXXXXXXXXXXXXXXXL---HQIN---------------- 556
           MDTLFRL S Q+ S +Q                       HQ N                
Sbjct: 1   MDTLFRLVSLQAASEQQQQQQQSASYNSRSTTSSGSRSSSHQTNASYSYYHHSSNSGGGG 60

Query: 555 ---GGYYL---EQPDYSFPHQDPYSYRDQECGTN-HHGLFMDEDFXXXXXSKH------L 415
              GGYY    + P   + + +PY    +ECG   HH L+MDEDF     S+H      +
Sbjct: 61  GGGGGYYYGGQQPPPSQYYYLEPYQ---EECGNAPHHQLYMDEDFSSSSSSRHFHHGARV 117

Query: 414 GGHRPPA--TPT--------------------------LVFDPXXXXADLNLDVFXXXXX 319
              +PPA  TPT                          L F P     DLNLD       
Sbjct: 118 QQQQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPP-----DLNLDFSSPASS 172

Query: 318 XXXXXXXXXXG------RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKV 157
                            RWASQLLLECAR+VAARD+QR QQL WMLNELASPYGD EQK+
Sbjct: 173 SGGGTASSGAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKL 232

Query: 156 AAYFLQGLFARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           A+YFLQGLFARLTASG RTLRTLAAASDRN SFDS RRTALRFQELSPWSSF
Sbjct: 233 ASYFLQGLFARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSF 284


>ref|NP_001060133.1| Os07g0586900 [Oryza sativa Japonica Group]
           gi|182691590|sp|Q8H2X8.2|SHR1_ORYSJ RecName:
           Full=Protein SHORT-ROOT 1; AltName: Full=OsSHR1
           gi|113611669|dbj|BAF22047.1| Os07g0586900 [Oryza sativa
           Japonica Group] gi|215768016|dbj|BAH00245.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 602

 Score =  186 bits (471), Expect = 1e-44
 Identities = 133/292 (45%), Positives = 148/292 (50%), Gaps = 66/292 (22%)
 Frame = -3

Query: 678 MDTLFRLFSPQSNSHRQXXXXXXXXXXXXXXXXXXXL---HQIN---------------- 556
           MDTLFRL S Q+ S +Q                       HQ N                
Sbjct: 1   MDTLFRLVSLQAASEQQQQQQQSASYNSRSTTSSGSRSSSHQTNASYSYYHHSSNSGGGG 60

Query: 555 ---GGYYL---EQPDYSFPHQDPYSYRDQECGTN-HHGLFMDEDFXXXXXSKH------L 415
              GGYY    + P   + + +PY    +ECG   HH L+MDEDF     S+H      +
Sbjct: 61  GGGGGYYYGGQQPPPSQYYYLEPYQ---EECGNAPHHQLYMDEDFSSSSSSRHFHHGARV 117

Query: 414 GGHRPPA--TPT--------------------------LVFDPXXXXADLNLDVFXXXXX 319
              +PPA  TPT                          L F P     DLNLD       
Sbjct: 118 QQQQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPP-----DLNLDFSSPASS 172

Query: 318 XXXXXXXXXXG------RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKV 157
                            RWASQLLLECAR+VAARD+QR QQL WMLNELASPYGD EQK+
Sbjct: 173 SGGGTASSGAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKL 232

Query: 156 AAYFLQGLFARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           A+YFLQGLFARLTASG RTLRTLAAASDRN SFDS RRTALRFQELSPWSSF
Sbjct: 233 ASYFLQGLFARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSF 284


>ref|XP_004958171.1| PREDICTED: protein SHORT-ROOT 1-like [Setaria italica]
          Length = 594

 Score =  182 bits (462), Expect = 1e-43
 Identities = 131/283 (46%), Positives = 146/283 (51%), Gaps = 57/283 (20%)
 Frame = -3

Query: 678 MDTLFRLFSPQSNSH-----RQXXXXXXXXXXXXXXXXXXXLHQIN-------------- 556
           MDTLFRL S Q++ +     +Q                    HQ N              
Sbjct: 1   MDTLFRLVSLQASENEKQQQQQQQSASYNSRSTTSSGSRSSSHQTNASYNYYYHSNSSGG 60

Query: 555 ----GGYYLEQPDYSFPHQDPY--SYRDQECGTNHHGLFMDEDFXXXXXSK-HLGGH--- 406
               G YY  Q      HQ  Y   Y+ +ECG  HH L+MDEDF     S+ H   H   
Sbjct: 61  GGGGGQYYYGQ---QHQHQQYYLEPYQQEECGNAHH-LYMDEDFSSSSSSRQHFHSHGAA 116

Query: 405 -RPPA-------TPTL------------VFDPXXXXA--DLNLDVFXXXXXXXXXXXXXX 292
            +PP        TP L            +F+        DLNLD                
Sbjct: 117 VQPPTSSVTTAPTPPLSTSSTAAGAAHALFEAADLSFPPDLNLDFSSPASSSGGGAASSA 176

Query: 291 XG------RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQGLF 130
                   RWASQLLLECARAVAARD+QR QQL WMLNELASPYG+ EQK+A+YFLQGLF
Sbjct: 177 AVGGGGSGRWASQLLLECARAVAARDSQRVQQLMWMLNELASPYGEVEQKLASYFLQGLF 236

Query: 129 ARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           ARLTASG RTLRTLAAASDRN SFDS RRTALRFQELSPWSSF
Sbjct: 237 ARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSF 279


>tpg|DAA41268.1| TPA: hypothetical protein ZEAMMB73_913831 [Zea mays]
          Length = 586

 Score =  181 bits (460), Expect = 2e-43
 Identities = 117/220 (53%), Positives = 130/220 (59%), Gaps = 35/220 (15%)
 Frame = -3

Query: 555 GGYYLEQPDYSFPHQDPYSYRDQECGTNHHGLFMDEDFXXXXXSK-HLGGHRP---PATP 388
           G YY  Q +  + +Q+PY  + +ECG N H L+MDEDF     S+ H   H     PAT 
Sbjct: 59  GQYYYGQQNQQY-YQEPY--QQEECG-NAHRLYMDEDFSSSSSSRQHFHSHGAAVQPATS 114

Query: 387 TLV-----------------------------FDPXXXXADLNLDVFXXXXXXXXXXXXX 295
           + V                             F P     DLNLD               
Sbjct: 115 SAVTATAPTPPLSTSSTAAGAAHALFEAADLSFPP-----DLNLDFSSPASSSGGCVASS 169

Query: 294 XXG--RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQGLFARL 121
                RWASQLLLECARAVAARD+QR QQL WMLNELASPYGD EQK+A+YFLQGLFARL
Sbjct: 170 AAVGGRWASQLLLECARAVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARL 229

Query: 120 TASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           TASG +TLRTLAAASDRN SFDS RRTALRFQELSPWSSF
Sbjct: 230 TASGPQTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSF 269


>dbj|BAK02177.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 597

 Score =  180 bits (456), Expect = 7e-43
 Identities = 130/287 (45%), Positives = 146/287 (50%), Gaps = 61/287 (21%)
 Frame = -3

Query: 678 MDTLFRLFSPQ-SNSHRQXXXXXXXXXXXXXXXXXXXLHQIN------------------ 556
           MDTLFRL S Q S   +Q                    HQ N                  
Sbjct: 1   MDTLFRLVSLQASEQQQQQQSASYNSRSTTSSGSRSSSHQTNASYNYYHHSTSSGGGGGG 60

Query: 555 ---GGYYL--EQPDYSFPHQDPYSYRDQECGTN--HHGLFMDEDFXXXXXSK-HLGGH-- 406
              G YY   +QP  S+ + +PY    +ECG N   H L+MDEDF     S+ H   H  
Sbjct: 61  GGGGQYYYSQQQPQQSY-YLEPYQ---EECGGNAHQHHLYMDEDFSSSSSSRQHFHSHGG 116

Query: 405 ---RPP---ATPTLVFDPXXXXA-------------------DLNLDVFXXXXXXXXXXX 301
              +PP   ATPT    P    +                   DLNLD             
Sbjct: 117 AAGQPPTSSATPTAPTPPLSTSSTAGGAGHALFEAADLSFPPDLNLDFSSPASSSGAGGT 176

Query: 300 XXXXG-------RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFL 142
                       RWASQLL+ECARAVA R++QR QQL WMLNELASPYGD EQK+A+YFL
Sbjct: 177 ASSGAVGGGGGGRWASQLLMECARAVATRESQRVQQLMWMLNELASPYGDVEQKLASYFL 236

Query: 141 QGLFARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           QGLFARLTASG RTLRTLAAA+DRN SFDS RRTALRFQELSPWSSF
Sbjct: 237 QGLFARLTASGPRTLRTLAAATDRNTSFDSTRRTALRFQELSPWSSF 283


>ref|XP_003562791.1| PREDICTED: protein SHORT-ROOT 1-like [Brachypodium distachyon]
          Length = 610

 Score =  179 bits (455), Expect = 9e-43
 Identities = 114/232 (49%), Positives = 133/232 (57%), Gaps = 49/232 (21%)
 Frame = -3

Query: 549 YYLEQPDYSFPHQDPYSYRDQECG-----TNHHG-----------LFMDEDFXXXXXSKH 418
           YY  QP  S+ + +PY    +ECG      +HH            L+MDEDF     S+H
Sbjct: 65  YYYSQPQQSY-YLEPYH---EECGGGNAHQDHHQHHQQHQHQQQQLYMDEDFSSSSSSRH 120

Query: 417 LGGH---------RPPATPTL-----------VFDPXXXXA--DLNLD-----------V 337
            GGH         +P +TP L           +F+P       DLNLD           +
Sbjct: 121 FGGHHGSHGGQQQQPSSTPPLSTTSSTAAGHALFEPAELSFPPDLNLDFSSPASSSGGGI 180

Query: 336 FXXXXXXXXXXXXXXXGRWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKV 157
                           GRWASQLL+ECARAVA+RD+ R QQL WMLNELASPYGD EQK+
Sbjct: 181 AAASASSPAVIGGAGGGRWASQLLMECARAVASRDSTRVQQLMWMLNELASPYGDVEQKL 240

Query: 156 AAYFLQGLFARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           A+YFLQ LFARLTASG RTLRTLAAA+DRN SFDS RR AL+FQELSPWSSF
Sbjct: 241 ASYFLQALFARLTASGPRTLRTLAAATDRNTSFDSTRRVALKFQELSPWSSF 292


>ref|XP_004983931.1| PREDICTED: protein SHORT-ROOT 2-like [Setaria italica]
          Length = 635

 Score =  172 bits (436), Expect = 1e-40
 Identities = 110/225 (48%), Positives = 125/225 (55%), Gaps = 40/225 (17%)
 Frame = -3

Query: 555 GGYYLE-QPDYSFPHQDPYSYRDQECGTNHHGLFMDEDFXXXXXSKHL---GGHRPPAT- 391
           GGYY + QP    P+Q+       ECG N HG +MDEDF     S+H        PPA  
Sbjct: 98  GGYYYDHQPAAPAPYQE-------ECG-NDHGFYMDEDFSSSSSSRHYHHQSSRAPPAAP 149

Query: 390 ---------PTL-----------------VFDPXXXXADLNLDVFXXXXXXXXXXXXXXX 289
                    PT                    D      D++LD                 
Sbjct: 150 SSSPPAPAPPTQPPSTSSGAGGHGGGLFEAADFSFPQVDIDLDFSSPATSSGAGGGGGTA 209

Query: 288 G---------RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQG 136
                     RWA+QLLL+CARAVAARD+QR QQL WMLNELASPYGD +QK+A+YFLQG
Sbjct: 210 ASSSGGGGAGRWAAQLLLQCARAVAARDSQRVQQLMWMLNELASPYGDVDQKLASYFLQG 269

Query: 135 LFARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           LFARLT SG RTLRTLAAASDRN SF+S RRTALRFQELSPW+SF
Sbjct: 270 LFARLTTSGPRTLRTLAAASDRNTSFESTRRTALRFQELSPWASF 314


>tpg|DAA45910.1| TPA: hypothetical protein ZEAMMB73_781034 [Zea mays]
          Length = 630

 Score =  172 bits (436), Expect = 1e-40
 Identities = 109/216 (50%), Positives = 124/216 (57%), Gaps = 31/216 (14%)
 Frame = -3

Query: 555 GGYYLEQPDYSFPHQDPYSYRDQECGTNHHGLFMDEDFXXXXXSK--------------- 421
           G YY +   +  P   PY    +ECG N HG +MDEDF     S+               
Sbjct: 96  GYYYYDH--HQPPPPPPYQ---EECG-NDHGFYMDEDFSSSSSSRSRHFQSSSRAPPSSS 149

Query: 420 ----HLGGHRPPATPTL---------VFDPXXXXADLNLDVFXXXXXXXXXXXXXXXG-- 286
               H     PPA+ +            D      D++LD                 G  
Sbjct: 150 PTPPHAQPQPPPASTSSGAGAGALFEAADFSFPQVDIDLDFSSPASSSGAAASSSGGGGA 209

Query: 285 -RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQGLFARLTASG 109
            RWA+QLLLECARAVAARD+QR QQL WMLNELASPYGD +QK+A+YFLQGLFARLT SG
Sbjct: 210 GRWAAQLLLECARAVAARDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSG 269

Query: 108 QRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
            RTLRTLAAASDRN SFDS RRTALRFQELSPW+SF
Sbjct: 270 PRTLRTLAAASDRNTSFDSTRRTALRFQELSPWASF 305


>ref|XP_002467655.1| hypothetical protein SORBIDRAFT_01g031720 [Sorghum bicolor]
           gi|241921509|gb|EER94653.1| hypothetical protein
           SORBIDRAFT_01g031720 [Sorghum bicolor]
          Length = 664

 Score =  170 bits (431), Expect = 5e-40
 Identities = 106/224 (47%), Positives = 124/224 (55%), Gaps = 39/224 (17%)
 Frame = -3

Query: 555 GGYYLEQPDYSFPHQDPYSYRDQECGTNHHGLFMDEDFXXXXXSKHLGG----------- 409
           GGYY +   +   HQ   +   +ECG N H  +MDEDF     S+H              
Sbjct: 109 GGYYYDHHHHH--HQPAAAPYQEECG-NDHRFYMDEDFSSSSSSRHFQPRGAPPAQPPPS 165

Query: 408 --------HRPPATPTL------------VFDPXXXXADLNLDVFXXXXXXXXXXXXXXX 289
                   H+ PA+ +               D      D++LD                 
Sbjct: 166 SSPAPTPPHQQPASTSSGAAAGGGGHLFEAADFSFPQVDIDLDFSSPASSSGAGAAAASS 225

Query: 288 G--------RWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQGL 133
                    RWA+QLLLECARAVAARD+QR QQL WMLNELASPYGD +QK+A+YFLQGL
Sbjct: 226 SSGGGGAAGRWAAQLLLECARAVAARDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGL 285

Query: 132 FARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           FARLT SG RTLRTLAAASDRN SF+S RRTALRFQELSPW+SF
Sbjct: 286 FARLTTSGPRTLRTLAAASDRNTSFESTRRTALRFQELSPWASF 329


>sp|A2XIA8.1|SHR2_ORYSI RecName: Full=Protein SHORT-ROOT 2; AltName: Full=OsSHR2
           gi|125544429|gb|EAY90568.1| hypothetical protein
           OsI_12169 [Oryza sativa Indica Group]
          Length = 603

 Score =  167 bits (422), Expect = 6e-39
 Identities = 104/211 (49%), Positives = 120/211 (56%), Gaps = 26/211 (12%)
 Frame = -3

Query: 555 GGYYLEQPDYSFPHQDPYSYRDQECGTNHHGLFMDEDFXXXXXSK--HLGGHRPPATPTL 382
           GGYY  +       Q P +Y + ECG N H  +MDEDF     S+  H G   P + P  
Sbjct: 78  GGYYYAE------EQQPAAYLE-ECG-NGHQFYMDEDFSSSSSSRQFHSGTGAPSSAPVP 129

Query: 381 -----------------VFDPXXXXADLNLDV-------FXXXXXXXXXXXXXXXGRWAS 274
                              D      D++LD                        GRWA+
Sbjct: 130 PPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAAPSSSGRWAA 189

Query: 273 QLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQGLFARLTASGQRTLR 94
           QLL+ECARAVA RD+QR QQL WMLNELASPYGD +QK+A+YFLQGLFARLT SG RTLR
Sbjct: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLR 249

Query: 93  TLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           TLA ASDRN SFDS RRTAL+FQELSPW+ F
Sbjct: 250 TLATASDRNASFDSTRRTALKFQELSPWTPF 280


>ref|NP_001173487.1| Os03g0433200 [Oryza sativa Japonica Group]
           gi|75137668|sp|Q75I13.1|SHR2_ORYSJ RecName: Full=Protein
           SHORT-ROOT 2; AltName: Full=OsSHR2
           gi|41469537|gb|AAS07303.1| putative GRAS family
           transcription factor [Oryza sativa Japonica Group]
           gi|108708985|gb|ABF96780.1| GRAS family transcription
           factor containing protein, expressed [Oryza sativa
           Japonica Group] gi|255674615|dbj|BAH92215.1|
           Os03g0433200 [Oryza sativa Japonica Group]
          Length = 603

 Score =  167 bits (422), Expect = 6e-39
 Identities = 104/211 (49%), Positives = 120/211 (56%), Gaps = 26/211 (12%)
 Frame = -3

Query: 555 GGYYLEQPDYSFPHQDPYSYRDQECGTNHHGLFMDEDFXXXXXSK--HLGGHRPPATPTL 382
           GGYY  +       Q P +Y + ECG N H  +MDEDF     S+  H G   P + P  
Sbjct: 78  GGYYYAE------EQQPAAYLE-ECG-NGHQFYMDEDFSSSSSSRQFHSGTGAPSSAPVP 129

Query: 381 -----------------VFDPXXXXADLNLDV-------FXXXXXXXXXXXXXXXGRWAS 274
                              D      D++LD                        GRWA+
Sbjct: 130 PPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAAPSSSGRWAA 189

Query: 273 QLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQGLFARLTASGQRTLR 94
           QLL+ECARAVA RD+QR QQL WMLNELASPYGD +QK+A+YFLQGLFARLT SG RTLR
Sbjct: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLR 249

Query: 93  TLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           TLA ASDRN SFDS RRTAL+FQELSPW+ F
Sbjct: 250 TLATASDRNASFDSTRRTALKFQELSPWTPF 280


>gb|EMS45550.1| hypothetical protein TRIUR3_26966 [Triticum urartu]
          Length = 135

 Score =  154 bits (388), Expect = 5e-35
 Identities = 75/88 (85%), Positives = 81/88 (92%)
 Frame = -3

Query: 264 LECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQGLFARLTASGQRTLRTLA 85
           +ECARAVA R++QR QQL WMLNELASPYGD EQK+A+YFLQGLFARLTASG RTLRTLA
Sbjct: 1   MECARAVATRESQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLA 60

Query: 84  AASDRNCSFDSARRTALRFQELSPWSSF 1
           AA+DRN SFDS RRTALRFQELSPWSSF
Sbjct: 61  AATDRNTSFDSTRRTALRFQELSPWSSF 88


>gb|EEE59318.1| hypothetical protein OsJ_11379 [Oryza sativa Japonica Group]
          Length = 584

 Score =  146 bits (369), Expect = 8e-33
 Identities = 95/211 (45%), Positives = 112/211 (53%), Gaps = 26/211 (12%)
 Frame = -3

Query: 555 GGYYLEQPDYSFPHQDPYSYRDQECGTNHHGLFMDEDFXXXXXSK--HLGGHRPPATPTL 382
           GGYY  +       Q P +Y + ECG N H  +MDEDF     S+  H G   P + P  
Sbjct: 78  GGYYYAE------EQQPAAYLE-ECG-NGHQFYMDEDFSSSSSSRQFHSGTGAPSSAPVP 129

Query: 381 -----------------VFDPXXXXADLNLDV-------FXXXXXXXXXXXXXXXGRWAS 274
                              D      D++LD                        GRWA+
Sbjct: 130 PPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAAPSSSGRWAA 189

Query: 273 QLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQGLFARLTASGQRTLR 94
           QLL+ECARAVA RD+QR QQL WMLNELASPYG+ +QK+A+YFLQGLFARLT S      
Sbjct: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGNVDQKLASYFLQGLFARLTTSRPAHAA 249

Query: 93  TLAAASDRNCSFDSARRTALRFQELSPWSSF 1
               ASDRN SFDS RRTAL+FQELSPW+ F
Sbjct: 250 DARTASDRNASFDSTRRTALKFQELSPWTPF 280


>ref|XP_003611578.1| GRAS family transcription factor [Medicago truncatula]
           gi|355512913|gb|AES94536.1| GRAS family transcription
           factor [Medicago truncatula]
          Length = 491

 Score =  142 bits (358), Expect = 2e-31
 Identities = 79/174 (45%), Positives = 103/174 (59%), Gaps = 8/174 (4%)
 Frame = -3

Query: 498 YRDQECGTNHHGLFMDEDFXXXXXSKHLGGHRPPAT--------PTLVFDPXXXXADLNL 343
           Y  QE        FMDE+      SKH   +  P T        PT    P    AD   
Sbjct: 45  YNPQEVEEECFNFFMDEEDLSSSSSKHYYPYNQPQTSNTITTNTPTTSLTPPPPTADFTF 104

Query: 342 DVFXXXXXXXXXXXXXXXGRWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQ 163
           ++                GRWA+ +LLE ARA+A +++ R QQL WMLNEL+SPYGD EQ
Sbjct: 105 EL---------------TGRWANNILLETARAIAEKNSTRLQQLMWMLNELSSPYGDIEQ 149

Query: 162 KVAAYFLQGLFARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           K+AAYFLQ LF+R+T +G RT RTLA+AS++ CSF+S R+T L+FQE+SPW++F
Sbjct: 150 KLAAYFLQALFSRMTEAGTRTFRTLASASEKTCSFESTRKTVLKFQEVSPWTTF 203


>ref|XP_004511835.1| PREDICTED: protein SHORT-ROOT-like [Cicer arietinum]
          Length = 486

 Score =  140 bits (354), Expect = 5e-31
 Identities = 90/235 (38%), Positives = 118/235 (50%), Gaps = 9/235 (3%)
 Frame = -3

Query: 678 MDTLFRL--FSPQSNSHRQXXXXXXXXXXXXXXXXXXXLHQINGGYYLEQPDYSFPHQDP 505
           MDTLFRL  F  Q +                           +  YY EQ D        
Sbjct: 1   MDTLFRLVSFQHQQDQSLNSNTTITTTTTTTSTSSRSSKQNYHHNYYQEQED-------- 52

Query: 504 YSYRDQECGTNHHGLFMDEDFXXXXXSKHLGGHRPPAT-------PTLVFDPXXXXADLN 346
               ++EC       FMDE+      SKH   +  P T       PTL   P     +L 
Sbjct: 53  ----EEEC----FNFFMDEEDLSSSSSKHYYPNYQPTTITTNTPTPTLTPPPTDFTFELT 104

Query: 345 LDVFXXXXXXXXXXXXXXXGRWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAE 166
                              G W+  +LLE ARA+A ++T RAQQL WMLNEL+SPYGD E
Sbjct: 105 -------------------GNWSHNILLETARAIAEKNTTRAQQLMWMLNELSSPYGDTE 145

Query: 165 QKVAAYFLQGLFARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSF 1
           QK+++YFLQ LF+R+T +G RT RTLA+AS++ CSF+S R+T L+FQE+SPW++F
Sbjct: 146 QKLSSYFLQALFSRITEAGNRTFRTLASASEKTCSFESTRKTVLKFQEVSPWNTF 200