BLASTX nr result
ID: Zingiber24_contig00021825
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00021825
(540 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275... 169 4e-40
ref|XP_006452830.1| hypothetical protein CICLE_v10009897mg [Citr... 167 1e-39
ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|2235447... 167 1e-39
gb|EOY30223.1| Small nuclear ribonucleoprotein family protein is... 167 2e-39
gb|EOY27290.1| Small nuclear ribonucleoprotein family protein is... 166 3e-39
ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [A... 166 4e-39
gb|EOY30224.1| Small nuclear ribonucleoprotein family protein is... 166 4e-39
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote... 165 6e-39
ref|XP_004488097.1| PREDICTED: probable U6 snRNA-associated Sm-l... 165 7e-39
ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Me... 164 9e-39
ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-l... 163 3e-38
gb|AFK42388.1| unknown [Medicago truncatula] 163 3e-38
ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like prote... 162 4e-38
gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica] 162 4e-38
ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like prote... 162 6e-38
gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus pe... 162 6e-38
ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like prote... 161 8e-38
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin... 160 1e-37
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|5... 160 1e-37
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri... 160 2e-37
>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 169 bits (428), Expect = 4e-40
Identities = 89/115 (77%), Positives = 92/115 (80%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLASY GILRSFDQFAN VLEGACERVIVGDLYCDIPLGLY+IRG
Sbjct: 14 SLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDLYCDIPLGLYIIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD EKEELP HM VS EIRRAQ+AERDATDLKG+MRKRMEFLDLD
Sbjct: 74 ENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRKRMEFLDLD 128
>ref|XP_006452830.1| hypothetical protein CICLE_v10009897mg [Citrus clementina]
gi|557556056|gb|ESR66070.1| hypothetical protein
CICLE_v10009897mg [Citrus clementina]
Length = 128
Score = 167 bits (424), Expect = 1e-39
Identities = 86/115 (74%), Positives = 92/115 (80%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLA+Y G+LRSFDQFANVVLEGACER+IVGDLYCDIPLGLYVIRG
Sbjct: 14 SLATYLDKKILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD EKEELP HM CVS EI+RAQ+AE+DAT LKGSMRKRMEFLD D
Sbjct: 74 ENVVLIGELDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 128
>ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|223544736|gb|EEF46252.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 167 bits (424), Expect = 1e-39
Identities = 88/115 (76%), Positives = 93/115 (80%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLA+Y GILRSFDQFANVVLEGACERVIVGDLYCDI LGLYVIRG
Sbjct: 14 SLATYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDLYCDILLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD EKEELP+HM CVS EI+RAQ+AER+ATDLKGSMRKRMEFLD D
Sbjct: 74 ENVVLIGELDLEKEELPSHMTCVSEAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128
>gb|EOY30223.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 167 bits (422), Expect = 2e-39
Identities = 87/115 (75%), Positives = 93/115 (80%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLA+Y G+LRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG
Sbjct: 14 SLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD EKEELP+HM VS EI+RAQ+AER+ATDLKGSMRKRMEFLD D
Sbjct: 74 ENVVLIGELDLEKEELPSHMTPVSAAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128
>gb|EOY27290.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 166 bits (420), Expect = 3e-39
Identities = 86/115 (74%), Positives = 91/115 (79%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLASY G LRSFDQFAN VLEGAC+RVIVGDLYCDIPLGLYVIRG
Sbjct: 14 SLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGDLYCDIPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD E+EELP HM CVS EIRRAQ+AER+A DLKG+MRKRMEFLDLD
Sbjct: 74 ENVVLIGELDLEREELPPHMTCVSAAEIRRAQKAEREARDLKGTMRKRMEFLDLD 128
>ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [Amborella trichopoda]
gi|548839141|gb|ERM99455.1| hypothetical protein
AMTR_s00131p00107350 [Amborella trichopoda]
Length = 128
Score = 166 bits (419), Expect = 4e-39
Identities = 87/115 (75%), Positives = 91/115 (79%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLASY GILRSFDQFAN VLEGACERVIVGDLYCD+PLGLYVIRG
Sbjct: 14 SLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDLYCDLPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD E+EELP HM VS EI+RAQ+AERDA DLKGSMRKRMEFLDLD
Sbjct: 74 ENVVLIGELDPEREELPAHMTRVSAVEIKRAQKAERDAKDLKGSMRKRMEFLDLD 128
>gb|EOY30224.1| Small nuclear ribonucleoprotein family protein isoform 2, partial
[Theobroma cacao]
Length = 114
Score = 166 bits (419), Expect = 4e-39
Identities = 82/93 (88%), Positives = 87/93 (93%)
Frame = -1
Query: 474 ILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVC 295
+LRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELD EKEELP+HM
Sbjct: 22 LLRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPSHMTP 81
Query: 294 VSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
VS EI+RAQ+AER+ATDLKGSMRKRMEFLD D
Sbjct: 82 VSAAEIKRAQKAEREATDLKGSMRKRMEFLDFD 114
>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera] gi|147803430|emb|CAN62239.1| hypothetical
protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product
[Vitis vinifera]
Length = 128
Score = 165 bits (418), Expect = 6e-39
Identities = 87/115 (75%), Positives = 92/115 (80%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLASY GILRSFDQFAN VLEGACERVIVGDLYCDIPLGLYVIRG
Sbjct: 14 SLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD EKEELP HM VS EI+RAQ+AER+A+DLKG+MRKRMEFLDLD
Sbjct: 74 ENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRKRMEFLDLD 128
>ref|XP_004488097.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Cicer arietinum]
Length = 128
Score = 165 bits (417), Expect = 7e-39
Identities = 84/115 (73%), Positives = 92/115 (80%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLA+Y G+LRSFDQFANVVLEGACERVIVGDLYCD+PLGLYVIRG
Sbjct: 14 SLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDVPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD KEELP HM+CVS +IR+AQ+AERDA+DLKG MRKRMEFLD D
Sbjct: 74 ENVVLIGELDLGKEELPPHMICVSEADIRKAQKAERDASDLKGMMRKRMEFLDFD 128
>ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355484387|gb|AES65590.1| U6 snRNA-associated Sm-like
protein LSm1 [Medicago truncatula]
Length = 128
Score = 164 bits (416), Expect = 9e-39
Identities = 84/115 (73%), Positives = 92/115 (80%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLA+Y G+LRSFDQFANVVLEGACERVIVGDLYCD+PLGLYVIRG
Sbjct: 14 SLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDVPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD KEELP HM CVS +IR+AQ+AERDA+DLKG+MRKRMEFLD D
Sbjct: 74 ENVVLIGELDLGKEELPPHMTCVSEADIRKAQKAERDASDLKGTMRKRMEFLDFD 128
>ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Citrus sinensis]
Length = 128
Score = 163 bits (412), Expect = 3e-38
Identities = 85/115 (73%), Positives = 91/115 (79%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLA+Y G+LRSFDQFANVVLEGACER+IVGDLYCDIPLGLYVIRG
Sbjct: 14 SLATYLDKKILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD EKEELP HM VS EI+RAQ+AE+DAT LKGSMRKRMEFLD D
Sbjct: 74 ENVVLIGELDLEKEELPAHMTRVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 128
>gb|AFK42388.1| unknown [Medicago truncatula]
Length = 128
Score = 163 bits (412), Expect = 3e-38
Identities = 83/115 (72%), Positives = 92/115 (80%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLA+Y G+LRSFDQFANVVL+GACERVIVGDLYCD+PLGLYVIRG
Sbjct: 14 SLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLKGACERVIVGDLYCDVPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD KEELP HM CVS +IR+AQ+AERDA+DLKG+MRKRMEFLD D
Sbjct: 74 ENVVLIGELDLGKEELPPHMTCVSEADIRKAQKAERDASDLKGTMRKRMEFLDFD 128
>ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
lycopersicum] gi|565351988|ref|XP_006342929.1|
PREDICTED: probable U6 snRNA-associated Sm-like protein
LSm1-like [Solanum tuberosum]
Length = 128
Score = 162 bits (411), Expect = 4e-38
Identities = 85/115 (73%), Positives = 90/115 (78%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLASY GILRSFDQFAN VLE ACER IVGDLYCDIPLGLY+IRG
Sbjct: 14 SLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERAIVGDLYCDIPLGLYIIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD +KEELP HM VS EIRRAQ+AERD+TDLKGSMRKRMEFLD+D
Sbjct: 74 ENVVLIGELDVDKEELPPHMTRVSEAEIRRAQKAERDSTDLKGSMRKRMEFLDMD 128
>gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica]
Length = 128
Score = 162 bits (411), Expect = 4e-38
Identities = 85/115 (73%), Positives = 91/115 (79%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLA+Y G+LRSFDQFANVVLEGACER+IVGDLYCDIPLGLYVIRG
Sbjct: 14 SLATYLDKKILVLLRDNRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD EKEELP HM VS EI+RAQ+AE+DAT LKGSMRKRMEFLD D
Sbjct: 74 ENVVLIGELDLEKEELPPHMTHVSTEEIKRAQKAEKDATVLKGSMRKRMEFLDFD 128
>ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
vesca subsp. vesca]
Length = 128
Score = 162 bits (409), Expect = 6e-38
Identities = 85/115 (73%), Positives = 90/115 (78%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLASY G+LRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG
Sbjct: 14 SLASYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGEL+ KEELP HM V EI+RAQ+AERDA+DLKGSMRKRMEFLD D
Sbjct: 74 ENVVLIGELELNKEELPPHMTLVPEAEIKRAQKAERDASDLKGSMRKRMEFLDFD 128
>gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus persica]
Length = 128
Score = 162 bits (409), Expect = 6e-38
Identities = 84/115 (73%), Positives = 92/115 (80%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLASY GILRSFDQFAN VLEGACERVIVG+LYCDIPLGLYVIRG
Sbjct: 14 SLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGELYCDIPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELDSE+EELP HM VS EI+ AQ+AER+A+DLKG+MRKRMEFLD+D
Sbjct: 74 ENVVLIGELDSEREELPPHMTRVSAAEIKSAQKAEREASDLKGTMRKRMEFLDMD 128
>ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
vesca subsp. vesca]
Length = 128
Score = 161 bits (408), Expect = 8e-38
Identities = 83/115 (72%), Positives = 93/115 (80%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLASY GILRSFDQFAN VLEGACERVIVG+LYCD+PLGLYVIRG
Sbjct: 14 SLASYLDKKILVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGELYCDLPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD+E+EELP HM VS EI+RAQ+AER+A+DLKG+MRKRMEFLD+D
Sbjct: 74 ENVVLIGELDAEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRKRMEFLDMD 128
>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
gi|561008464|gb|ESW07413.1| hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris]
Length = 128
Score = 160 bits (406), Expect = 1e-37
Identities = 84/115 (73%), Positives = 90/115 (78%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLASY G LRSFDQFAN VLEGACERVIVGDLYCDIPLGLYVIRG
Sbjct: 14 SLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD E+EELP HM VS EI+RAQ+AER+A+DLKG+MRKRMEFLD D
Sbjct: 74 ENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 128
>ref|XP_002331181.1| predicted protein [Populus trichocarpa]
gi|566149434|ref|XP_006369123.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
x Populus deltoides] gi|550347483|gb|ERP65692.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 160 bits (406), Expect = 1e-37
Identities = 85/115 (73%), Positives = 91/115 (79%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLA+Y G+LRSFDQFAN VLEGACERVIVGDLYCDI LGLYVIRG
Sbjct: 14 SLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDLYCDIHLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD E+EELP HM VS EIRRAQ+AER+ATDLKG+MRKRMEFLDLD
Sbjct: 74 ENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRKRMEFLDLD 128
>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 160 bits (404), Expect = 2e-37
Identities = 85/115 (73%), Positives = 90/115 (78%)
Frame = -1
Query: 540 SLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRG 361
SLASY GILRSFDQFAN VLEGACER IVGDLYCDI LGLYVIRG
Sbjct: 14 SLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDLYCDIHLGLYVIRG 73
Query: 360 ENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRKRMEFLDLD 196
ENVVLIGELD E+EELP HM VS EI+RAQ+AER+ATDLKG+MRKRMEFLDLD
Sbjct: 74 ENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTMRKRMEFLDLD 128