BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00021327
         (1377 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36559.3| unnamed protein product [Vitis vinifera]              706   0.0  
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   706   0.0  
gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus pe...   703   0.0  
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...   702   0.0  
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...   701   0.0  
ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutr...   700   0.0  
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   698   0.0  
ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal...   698   0.0  
ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrat...   697   0.0  
ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Caps...   697   0.0  
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   696   0.0  
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1...   695   0.0  
ref|XP_006857036.1| hypothetical protein AMTR_s00065p00022170 [A...   694   0.0  
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...   692   0.0  
gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2...   691   0.0  
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   690   0.0  
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...   689   0.0  
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...   687   0.0  
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   686   0.0  
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   686   0.0  

>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  706 bits (1822), Expect = 0.0
 Identities = 336/458 (73%), Positives = 394/458 (86%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            ++QQDA++SVPR+QL+KVFEALDTLG TKWRIN+R+L VVE +W++GG + GLV+R+++ 
Sbjct: 268  RKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVP 327

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            L ++P +EDL EI             N E HSLRCD E+KLSVA K+  EEGFYYPHNLD
Sbjct: 328  LPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLD 387

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRG+LEFAEG+PLGKSGL WLKI LAN+Y GGVEKLSYD R
Sbjct: 388  FRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGR 447

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F++NHL D+F+SA++P+ G RWW+TAEDPFQCLAACI+L +AL+S  PHT +SHLPIH
Sbjct: 448  LAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIH 507

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGRNSLEA+AVNLVAGEKP DVYS IA RV EIM++DS KDP   P 
Sbjct: 508  QDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPK 567

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            ALLAK+LI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL EKG+I D++LLF A+CYAA
Sbjct: 568  ALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAA 627

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+FQAAR+IM WLG+CAK+IASEN+PV+WTTPLGLPV+QPY  SERHLIRTS
Sbjct: 628  KVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTS 687

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG  V +++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 688  LQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMT 725


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score =  706 bits (1822), Expect = 0.0
 Identities = 336/458 (73%), Positives = 394/458 (86%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            ++QQDA++SVPR+QL+KVFEALDTLG TKWRIN+R+L VVE +W++GG + GLV+R+++ 
Sbjct: 439  RKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVP 498

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            L ++P +EDL EI             N E HSLRCD E+KLSVA K+  EEGFYYPHNLD
Sbjct: 499  LPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLD 558

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRG+LEFAEG+PLGKSGL WLKI LAN+Y GGVEKLSYD R
Sbjct: 559  FRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGR 618

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F++NHL D+F+SA++P+ G RWW+TAEDPFQCLAACI+L +AL+S  PHT +SHLPIH
Sbjct: 619  LAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIH 678

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGRNSLEA+AVNLVAGEKP DVYS IA RV EIM++DS KDP   P 
Sbjct: 679  QDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPK 738

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            ALLAK+LI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL EKG+I D++LLF A+CYAA
Sbjct: 739  ALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAA 798

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+FQAAR+IM WLG+CAK+IASEN+PV+WTTPLGLPV+QPY  SERHLIRTS
Sbjct: 799  KVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTS 858

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG  V +++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 859  LQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMT 896


>gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score =  703 bits (1815), Expect = 0.0
 Identities = 337/458 (73%), Positives = 388/458 (84%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            ++Q DA+R++ R Q++KVFEALD LG TKWR+NK++L VVE +W++GG IAGLVNR+D+ 
Sbjct: 436  RKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVESIWARGGNIAGLVNREDVP 495

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + D+  SEDL EI             N E HS RCD ELKLSVA K+  EEGFYYPHNLD
Sbjct: 496  VPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLD 555

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRG+LEFAEG+PLGKSGL WLKIHLAN+Y GGVEKLSY+ R
Sbjct: 556  FRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEGR 615

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F++NH+ DIF+SA +P+ G RWW+TAEDP QCLAACI+L +AL SP PHT +SHLPIH
Sbjct: 616  LAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIH 675

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR+SLEAAAVNLV G+KP DVYS IA RV EIM++DS KDP   P 
Sbjct: 676  QDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAARVHEIMKRDSNKDPTTSPN 735

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            ALLA+IL+NQ+DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG+I DD+LLF A+CYAA
Sbjct: 736  ALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAA 795

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+FQAAR IM WLGDCAK+IASEN+PVRWTTPLGLPVVQPY  SERHLIRTS
Sbjct: 796  KVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTS 855

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQRE  SV +++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 856  LQVLALQRESNSVDIRKQRTAFPPNFVHSLDGSHMMMT 893


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 882

 Score =  702 bits (1812), Expect = 0.0
 Identities = 338/458 (73%), Positives = 392/458 (85%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            ++QQ A+RSVP KQ++KVFEALDTLG TKWR+N+R+LDVVE +W+ GG IAGLV+R+DI 
Sbjct: 342  RQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIP 401

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + ++P S+DL EI             N E HS RCD ELKLSVA KL  EEGFYYPHNLD
Sbjct: 402  IPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLD 461

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HL HL+SDLCRG+LEF EG+PLGKSGL WLKIHLAN+Y GGVEKLS+D R
Sbjct: 462  FRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGR 521

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F+ENHL++IF+SA++P+ GKRWW+ AEDPFQCLAACI+L +AL S  PHT +SHLPIH
Sbjct: 522  LAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIH 581

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR++LEAAAVNLVA EKP DVYS IA+RV EI+++DS KDP   P 
Sbjct: 582  QDGSCNGLQHYAALGRDTLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPH 641

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            ALLAKIL++QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG I DD+LLF A+CY A
Sbjct: 642  ALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTA 701

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+FQAAR+IM WLGDCAKIIASE++PV+WTTPLGLPVVQPY  +ERHLI+TS
Sbjct: 702  KVTLTALGELFQAARDIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTS 761

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQ+L+LQREG SV V++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 762  LQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMT 799


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
            gi|222854390|gb|EEE91937.1| hypothetical protein
            POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score =  701 bits (1810), Expect = 0.0
 Identities = 341/458 (74%), Positives = 391/458 (85%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            ++QQDA+RSVP KQ++KVFEALDTLG TKWR+N ++LDVVE +W+ GG  AGLVNR DI 
Sbjct: 442  RQQQDAVRSVPGKQMQKVFEALDTLGNTKWRVNGKVLDVVERIWASGGNNAGLVNRGDIP 501

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + ++  S+DL EI             N E HS RCD ELKLSVA KL  EEGFYYPHNLD
Sbjct: 502  IPEKLSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLD 561

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HL HL+SDLCRG+LEFAEG+PLGKSGL WLKIHLAN+Y GGVEKLS+D R
Sbjct: 562  FRGRAYPMHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSHDGR 621

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F+ENHL++IF+SAE+P+ GKRWW+TAEDPFQCLAACI+L +ALKS  PHT +SHLPIH
Sbjct: 622  LAFVENHLSEIFDSAENPVNGKRWWLTAEDPFQCLAACINLSEALKSASPHTVISHLPIH 681

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR+S EAAAVNLVA EKP DVYS IA RV EI+++DS KDP   P 
Sbjct: 682  QDGSCNGLQHYAALGRDSQEAAAVNLVAAEKPSDVYSEIATRVHEIIRRDSNKDPATNPH 741

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            ALLAK+LI++VDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG I DD++LF A+CYAA
Sbjct: 742  ALLAKVLIDEVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRVLFSAACYAA 801

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+FQAAR+IM WLGDCAK+IASE++PVRWTTPLGLPVVQPY  ++RHLIRTS
Sbjct: 802  KVTLTALGELFQAARDIMGWLGDCAKVIASEDQPVRWTTPLGLPVVQPYYKTQRHLIRTS 861

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG SV V++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 862  LQVLALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMT 899


>ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutrema salsugineum]
            gi|557106040|gb|ESQ46365.1| hypothetical protein
            EUTSA_v10000030mg [Eutrema salsugineum]
          Length = 993

 Score =  700 bits (1807), Expect = 0.0
 Identities = 340/458 (74%), Positives = 387/458 (84%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            K+QQDA+R +  K   +VFEALDTLG TKWR+N++ILDVVE LW+ GG IAGLVNR+D+ 
Sbjct: 453  KKQQDALRDISSKTAHRVFEALDTLGNTKWRVNRKILDVVERLWADGGNIAGLVNREDVP 512

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + ++P SED  EI             N E HSLRCD+ELKLSVA K+  EEGFYYPHNLD
Sbjct: 513  IPEKPSSEDPEEIQSWKWSVRKANKINRERHSLRCDVELKLSVARKMKDEEGFYYPHNLD 572

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRG LEFAEG+PLGKSGL+WLKIHLAN+Y GGVEKLS+D R
Sbjct: 573  FRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLYWLKIHLANLYAGGVEKLSHDGR 632

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F+ENHL +I +SAE+PI G+RWW+ AEDPFQCLAAC+ L  ALKSP P++ +SHLPIH
Sbjct: 633  LAFVENHLDNIMDSAENPIHGQRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIH 692

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR+S EAAAVNLVAGEKP DVYS I++RV EIM+KDS KDP   P 
Sbjct: 693  QDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISLRVHEIMKKDSSKDPESNPT 752

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            A LAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVI D+++LF A+CYAA
Sbjct: 753  AALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDERMLFSAACYAA 812

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+F+AAR IM WLGDCAKIIAS+N PVRW TPLGLPVVQPY  SERHLIRTS
Sbjct: 813  KVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTS 872

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG +V V++Q+  FPPNFVHSLDG+HMMMT
Sbjct: 873  LQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMT 910


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 973

 Score =  698 bits (1802), Expect = 0.0
 Identities = 332/458 (72%), Positives = 390/458 (85%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            ++Q D +R++  +Q++KVFEALD LG TKWRINK++L+VVE +W++GG IAGLV+R+D+ 
Sbjct: 433  RKQVDTMRNISGRQMQKVFEALDMLGSTKWRINKKVLNVVESIWARGGNIAGLVDREDVP 492

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + ++P SED  EI             N E HS RCD ELKLSVA ++  E+GFYYPHNLD
Sbjct: 493  VPEKPPSEDPTEIQEWRWSARKAKKLNQERHSQRCDTELKLSVARRMKDEDGFYYPHNLD 552

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRG+LEFAEG+PLGKSGL WLKIHLAN+Y GGVEKLSYD R
Sbjct: 553  FRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYSGGVEKLSYDGR 612

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            ++F++NH+ DIF+SA +P+ G RWW+TAEDP QCLAACI+L +AL SP PHT +SHLPIH
Sbjct: 613  ISFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIH 672

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR++LEAAAVNLVAGEKP DVYS IA+RV +IM++DS KDP   P 
Sbjct: 673  QDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAVRVHDIMKRDSNKDPTTNPN 732

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            ALLAK+L+NQ+DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG+I DD+LLF A+CYAA
Sbjct: 733  ALLAKVLVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAA 792

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+FQAAR IM WLGDCAK+IASEN+PVRWTTPLGLPVVQPY  SERHLIRTS
Sbjct: 793  KVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTS 852

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQRE   V V++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 853  LQVLALQRESNLVDVRKQRTAFPPNFVHSLDGSHMMMT 890


>ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
            gi|3914826|sp|O24600.1|RPOT3_ARATH RecName:
            Full=DNA-directed RNA polymerase 3, chloroplastic; Flags:
            Precursor gi|2330560|emb|CAA69972.1| chloroplast
            single-subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|2330564|emb|CAA69717.1| chloroplast
            single-subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|4115372|gb|AAD03373.1| chloroplast single
            subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|110739160|dbj|BAF01496.1| chloroplast single
            subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA
            polymerase 3 [Arabidopsis thaliana]
          Length = 993

 Score =  698 bits (1802), Expect = 0.0
 Identities = 339/458 (74%), Positives = 384/458 (83%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            K+QQDA++ +  K   +VFEALDTLG TKWR+N+ ILDVVE LW+ GG IAGLVNR+D+ 
Sbjct: 453  KKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGNIAGLVNREDVP 512

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + ++P SED  E+             N E HSLRCD+ELKLSVA K+  EEGFYYPHNLD
Sbjct: 513  IPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKDEEGFYYPHNLD 572

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRG LEFAEG+PLGKSGLHWLKIHLAN+Y GGVEKLS+D R
Sbjct: 573  FRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDAR 632

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F+ENHL DI +SAE+PI GKRWW+ AEDPFQCLAAC+ L  ALKSP P++ +SHLPIH
Sbjct: 633  LAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIH 692

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR+S EAAAVNLVAGEKP DVYS I+ RV EIM+KDS KDP   P 
Sbjct: 693  QDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPT 752

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            A LAKILI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVI D+++LF A+CY+A
Sbjct: 753  AALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERMLFAAACYSA 812

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+F+AAR IM WLGDCAKIIAS+N PVRW TPLGLPVVQPY  SERHLIRTS
Sbjct: 813  KVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTS 872

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG +V V++Q+  FPPNFVHSLDG+HMMMT
Sbjct: 873  LQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMT 910


>ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrata]
            gi|297326387|gb|EFH56807.1| PDE319/SCA3 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 990

 Score =  697 bits (1800), Expect = 0.0
 Identities = 339/458 (74%), Positives = 384/458 (83%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            K+QQDA+R +  K   +VFEALDTLG TKWR+N+ ILDVVE LW+ GG IAGLVNR+D+ 
Sbjct: 450  KKQQDALRDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGNIAGLVNREDVP 509

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + ++P SED  EI             N E HSLRCD+ELKLSVA K+  EEGFYYPHNLD
Sbjct: 510  IPEKPSSEDPEEIQSWKWSVRKANKINRERHSLRCDVELKLSVARKMKDEEGFYYPHNLD 569

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRG LEFAEG+PLGKSGLHWLKIHLAN++ GGVEKLS+D R
Sbjct: 570  FRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLFAGGVEKLSHDAR 629

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F+ENHL DI +SAE+PI GKRWW+ AEDPFQCLAAC+ L  AL+SP P++ +SHLPIH
Sbjct: 630  LAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALRSPSPYSVISHLPIH 689

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR+S EAAAVNLVAGEKP DVYS I+ RV EIM+KDS KDP   P 
Sbjct: 690  QDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPT 749

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            A LAKILI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVI D+++LF A+CY+A
Sbjct: 750  AALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERMLFAAACYSA 809

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+F+AAR IM WLGDCAKIIAS+N PVRW TPLGLPVVQPY  SERHLIRTS
Sbjct: 810  KVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTS 869

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG +V V++Q+  FPPNFVHSLDG+HMMMT
Sbjct: 870  LQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMT 907


>ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Capsella rubella]
            gi|482564829|gb|EOA29019.1| hypothetical protein
            CARUB_v10025273mg [Capsella rubella]
          Length = 991

 Score =  697 bits (1799), Expect = 0.0
 Identities = 338/458 (73%), Positives = 384/458 (83%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            K+QQDA+R +  K   +VFEALDTLG TKWR+N++ILDVVE LW+ GG IAGLVNR+D+ 
Sbjct: 451  KKQQDALRDISSKTAHRVFEALDTLGNTKWRVNRKILDVVERLWADGGNIAGLVNREDVP 510

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + ++P SED  E+             N E HSLRCD+ELKLSVA K+  EEGFYYPHNLD
Sbjct: 511  IPEKPSSEDPEELQSWKWSVRKANKINRERHSLRCDVELKLSVARKMKDEEGFYYPHNLD 570

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRG LEFAEG+PLGKSGLHWLKIHLAN+Y GGVEKLS+D R
Sbjct: 571  FRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDAR 630

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F+E HL D+ +SAE+PI GKRWW+ AEDPFQCLAAC+ L  ALKSP P++ +SHLPIH
Sbjct: 631  LAFVETHLDDVMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIH 690

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR+S EAAAVNLVAGEKP DVYS I+ RV EIM+KDS KDP   P 
Sbjct: 691  QDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPT 750

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            A LAKILI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVI D+++LF A+CY+A
Sbjct: 751  AALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERMLFAAACYSA 810

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+F+AAR IM WLGDCAKIIAS+N PVRW TPLGLPVVQPY  SERHLIRTS
Sbjct: 811  KVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTS 870

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG +V V++Q+  FPPNFVHSLDG+HMMMT
Sbjct: 871  LQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMT 908


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
            sinensis]
          Length = 1009

 Score =  696 bits (1796), Expect = 0.0
 Identities = 335/458 (73%), Positives = 392/458 (85%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            ++QQ+A++SV    +KKVFEALDTLG TKWR+NK++L V+E +W  GG IAGLV+R D+ 
Sbjct: 469  RKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVP 528

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + ++P SED+ E+             N E HS RCD ELKLSVA ++  EEGFYYPHNLD
Sbjct: 529  IPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLD 588

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SD+CRG+LEFAEG+PLGKSGL WLKIHLAN++ GGVEKLS+D R
Sbjct: 589  FRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGR 648

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F+ENHL +IF+SAE+PI G RWW+TAEDPFQCLAACI+L +ALKS  PH+ +SHLPIH
Sbjct: 649  LAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVISHLPIH 708

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGRN+LEAAAVNLVAGEKP DVYS IA+RV EIM++DS KDP+  P 
Sbjct: 709  QDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQ 768

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            ALLAKILI+QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I DD+ LF A+CYAA
Sbjct: 769  ALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAA 828

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+F+AAR+IM WLGDCAK+IASEN+PVRWTTPLGLPVVQPY  +ERHLIRTS
Sbjct: 829  KVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTS 888

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG+SV +++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 889  LQVLALQREGKSVEIRKQRTAFPPNFVHSLDGSHMMMT 926


>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score =  695 bits (1794), Expect = 0.0
 Identities = 336/458 (73%), Positives = 391/458 (85%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            ++QQDA++ V  K+++KVFEALDTLG TKWR+NK++L VVE +W+ GG IAGLV+R DI 
Sbjct: 438  RKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAGLVDRNDIP 497

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + ++P SED  E              N E HS RCD ELKLSVA K+ +EEGFYYPHNLD
Sbjct: 498  IPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKMENEEGFYYPHNLD 557

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRG+LEFAEG+PLG+SGLHWLKIHLAN++ GGVEKLS+D R
Sbjct: 558  FRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLSHDGR 617

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F++NHL DIF+SAE+PI G RWW+TAEDPFQCLAACI+L ++LKS  PH+ +S+LPIH
Sbjct: 618  LAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSYLPIH 677

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR+SLEAAAVNLVAGEKP DVYS IA+RV  IM++DS+KDP   P 
Sbjct: 678  QDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPN 737

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            A LAK+LI+QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I DD++LF A+CY A
Sbjct: 738  ASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTA 797

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+FQAARNIM WLGDCAK+IASEN+PV+WTTPLGLPVVQPY  SERHLIRTS
Sbjct: 798  KVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTS 857

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG SV V++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 858  LQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMT 895


>ref|XP_006857036.1| hypothetical protein AMTR_s00065p00022170 [Amborella trichopoda]
            gi|548861119|gb|ERN18503.1| hypothetical protein
            AMTR_s00065p00022170 [Amborella trichopoda]
          Length = 987

 Score =  694 bits (1792), Expect = 0.0
 Identities = 338/458 (73%), Positives = 386/458 (84%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            K+Q++A+++VP+KQL+ VFEALDTLG TKWR+NKRILDVV  +W++GGGIAGLV+R+D+ 
Sbjct: 447  KQQREAVKNVPQKQLQNVFEALDTLGSTKWRVNKRILDVVNRVWARGGGIAGLVDREDVL 506

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            L ++PD+ED  EI             NSE HS RCD+ELKLSVA K+  EEGFYYPHNLD
Sbjct: 507  LPEKPDTEDEMEIRKWRWSVKKAKKVNSERHSQRCDLELKLSVARKMREEEGFYYPHNLD 566

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL SDLCRGILEFAEG+PLGKSGL W KIHLAN+Y  GV+KLSYD R
Sbjct: 567  FRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWSKIHLANLYACGVDKLSYDGR 626

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F+ENHL DIF+SAE P+ GKRWW+ AEDPFQCLAAC++L +ALKSP P   +SH+P+H
Sbjct: 627  LAFVENHLDDIFDSAERPLEGKRWWLNAEDPFQCLAACMNLFEALKSPTPENVISHMPVH 686

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR+ L AAAVNLVAGEKP DVYSGIA RVLEIM++DSEK P   P 
Sbjct: 687  QDGSCNGLQHYAALGRDRLGAAAVNLVAGEKPADVYSGIAARVLEIMKRDSEKGPASNPN 746

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            A LA+ L++QVDRKLVKQTVMTSVYGVTY+GAR+QI RRL+E+G I DD  LFRASCYAA
Sbjct: 747  AFLARALVDQVDRKLVKQTVMTSVYGVTYIGARDQICRRLKERGHITDDSQLFRASCYAA 806

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE FQAARNIM WLGDCAK+IASENEPVRWTTPLGLPVVQPYR   RHL++TS
Sbjct: 807  KVTLTALGETFQAARNIMSWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKFARHLVKTS 866

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQRE  SV VKRQ+  F PNFVHSLDGSHMMMT
Sbjct: 867  LQVLALQRESNSVMVKRQRTAFAPNFVHSLDGSHMMMT 904


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
            Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 3B; Flags: Precursor
            gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
            [Nicotiana tabacum]
          Length = 977

 Score =  692 bits (1786), Expect = 0.0
 Identities = 333/458 (72%), Positives = 388/458 (84%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            + QQDA+R VP KQ+++V+EALDTLG TKWR+NKRIL+VVE +W+ GG IAGLV+RKD+ 
Sbjct: 437  RRQQDAVRGVPTKQMQQVYEALDTLGSTKWRVNKRILNVVESIWAGGGNIAGLVDRKDVP 496

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + +  +S+D+ E+             N E+HS RCD ELKLSVA KL  EEGFYYPHNLD
Sbjct: 497  IPELSNSDDIMEVKKWKWKVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLD 556

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRGILEFAEG+PLGKSGL WLKIHLA++Y GGVEKL YD R
Sbjct: 557  FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDAR 616

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F+ENH+ DI +SA +P+ G RWW+ AEDPFQCLAACI+L +ALKS  PHT +SHLPIH
Sbjct: 617  LAFVENHIHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISHLPIH 676

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR+S+EAAAVNLVAGEKP DVY+ IA+RV  I++ DS KDP + P 
Sbjct: 677  QDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPN 736

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            ALLAK+LI+QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG+I DD+LLF ASCYAA
Sbjct: 737  ALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAA 796

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+FQAAR  M WLGDCAK+IA EN+PVRWTTPLGLPVVQPY  ++RH+IRTS
Sbjct: 797  KVTLAALGELFQAARGTMTWLGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTS 856

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQ+L+LQREG +V V++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 857  LQILALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMT 894


>gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score =  691 bits (1782), Expect = 0.0
 Identities = 336/459 (73%), Positives = 391/459 (85%), Gaps = 1/459 (0%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            ++QQDA++ V  K+++KVFEALDTLG TKWR+NK++L VVE +W+ GG IAGLV+R DI 
Sbjct: 316  RKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAGLVDRNDIP 375

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + ++P SED  E              N E HS RCD ELKLSVA K+ +EEGFYYPHNLD
Sbjct: 376  IPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKMENEEGFYYPHNLD 435

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRG+LEFAEG+PLG+SGLHWLKIHLAN++ GGVEKLS+D R
Sbjct: 436  FRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLSHDGR 495

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F++NHL DIF+SAE+PI G RWW+TAEDPFQCLAACI+L ++LKS  PH+ +S+LPIH
Sbjct: 496  LAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSYLPIH 555

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR+SLEAAAVNLVAGEKP DVYS IA+RV  IM++DS+KDP   P 
Sbjct: 556  QDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPN 615

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            A LAK+LI+QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I DD++LF A+CY A
Sbjct: 616  ASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTA 675

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+FQAARNIM WLGDCAK+IASEN+PV+WTTPLGLPVVQPY  SERHLIRTS
Sbjct: 676  KVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTS 735

Query: 115  LQVLSLQREGQS-VSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG S V V++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 736  LQVLALQREGDSVVEVRKQRTAFPPNFVHSLDGSHMMMT 774


>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            tuberosum]
          Length = 1015

 Score =  690 bits (1780), Expect = 0.0
 Identities = 333/458 (72%), Positives = 387/458 (84%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            + QQDA+RSVP KQ+++V+EALDTLG TKWR+NKRIL VVE +W+ GG IAGLV+RKD+ 
Sbjct: 476  RRQQDAVRSVPAKQMQQVYEALDTLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVP 535

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + +   S+D+ E+             N E+HS RCD ELKLSVA KL  EEGFYYPHNLD
Sbjct: 536  IPEL-HSDDIMELKRWKWRVRKAKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLD 594

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRGILEFAEG+PLGKSGL WLK+HLA++Y GG+EKL YD R
Sbjct: 595  FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDAR 654

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            + F+ENH+ DI +SA +P+ G RWW+ AEDP QCLAACI+L +ALKSP PHT +SHLPIH
Sbjct: 655  IAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEALKSPSPHTVISHLPIH 714

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR+S+EAAAVNLVAGEKP DVY+ IA+RV  I++ DS KDP   P 
Sbjct: 715  QDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPN 774

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            ALLAK+LI+QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG+I DD+LLF ASCYAA
Sbjct: 775  ALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAA 834

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+FQAAR  M WLGDCAK+IASEN+PVRWTTPLGLPVVQPY  ++RH+IRTS
Sbjct: 835  KVTLAALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTS 894

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG +V V++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 895  LQVLALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMT 932


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556792|gb|ESR66806.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score =  689 bits (1779), Expect = 0.0
 Identities = 333/458 (72%), Positives = 389/458 (84%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            ++QQ+A++SV    +KKVFEALDTLG TKWR+NK++L V+E +W  GG IAGLV+R D+ 
Sbjct: 472  RKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVL 531

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + ++P SED+ E+             N E HS RCD ELKLSVA ++  EEGFYYPHNLD
Sbjct: 532  IPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLD 591

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SD+CRG+LEFAEG+PLGKSGL WLKIHLAN++ GGVEKLS+D R
Sbjct: 592  FRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGR 651

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F+ENHL +IF+SAE+PI G RWW+TAEDPFQCLAACI+L +ALKS  PH+ +SHLPIH
Sbjct: 652  LAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLAEALKSSSPHSVISHLPIH 711

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGRN+LEAAAVNLVAGEKP DVYS IA+RV EIM++DS KD +  P 
Sbjct: 712  QDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDHSKHPQ 771

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            ALLAKILI+QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I DD+ LF A+CYAA
Sbjct: 772  ALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAA 831

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+F+AAR+IM WLGDCAK+IASEN+PVRWTTPLGLPVVQPY  +ERHLIRTS
Sbjct: 832  KVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTS 891

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG  V +++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 892  LQVLALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMT 929


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
            Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 3; Flags: Precursor
            gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
            Full=DNA-directed RNA polymerase 3A, chloroplastic;
            AltName: Full=NictaRpoT3-syl; AltName: Full=T7
            bacteriophage-type single subunit RNA polymerase 3A;
            Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
            RNA polymerase [Nicotiana sylvestris]
            gi|21425679|emb|CAC95027.2| plastid RNA polymerase
            [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 977

 Score =  687 bits (1773), Expect = 0.0
 Identities = 334/458 (72%), Positives = 386/458 (84%)
 Frame = -3

Query: 1375 KEQQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQ 1196
            + QQDA+RSVP KQ+++V+EALDTLG TKWR+NKRIL VVE +W+ GG IAGLV+RKD+ 
Sbjct: 438  RRQQDAVRSVPTKQMQQVYEALDTLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVP 497

Query: 1195 LSDRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLD 1016
            + +   S+D+ E+             N E+HS RCD ELKLSVA KL  EEGFYYPHNLD
Sbjct: 498  IPEL-HSDDIMEVKKWKWRVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLD 556

Query: 1015 FRGRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRR 836
            FRGRAYPMH HLNHL+SDLCRGILEFAEG+PLGKSGL WLKIHLA++Y GG+EKL YD R
Sbjct: 557  FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGIEKLCYDAR 616

Query: 835  LNFIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIH 656
            L F+ENH+ DI +SA +P+ G RWW+ AEDPFQCLAACI+L +ALKS  PHT  SHLPIH
Sbjct: 617  LAFVENHIDDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVFSHLPIH 676

Query: 655  QDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPA 476
            QDGSCNGLQHYAALGR+S+EAAAVNLVAG+KP DVY+ IA+RV  I++ DS KDP   P 
Sbjct: 677  QDGSCNGLQHYAALGRDSMEAAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDPATDPN 736

Query: 475  ALLAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAA 296
            ALLAK+LI+QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG+I DD+LLF ASCYAA
Sbjct: 737  ALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAA 796

Query: 295  KVTFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTS 116
            KVT  ALGE+FQAAR  M WLGDCAK+IASEN+PVRWTTPLGLPVVQPY  ++RH+IRTS
Sbjct: 797  KVTLAALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTS 856

Query: 115  LQVLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            LQVL+LQREG +V V++Q+  FPPNFVHSLDGSHMMMT
Sbjct: 857  LQVLALQREGDTVEVRKQRTAFPPNFVHSLDGSHMMMT 894


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score =  686 bits (1770), Expect = 0.0
 Identities = 330/456 (72%), Positives = 385/456 (84%)
 Frame = -3

Query: 1369 QQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQLS 1190
            QQDA++++  KQ++KVFEALD LG TKWR+N+ +L VVE LW+QGG  AGLV+RKD+ + 
Sbjct: 438  QQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKDVPIP 497

Query: 1189 DRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLDFR 1010
            ++P   DL E+             N E+HS RCD+ELKLSVA K+  EEGFYYPHNLDFR
Sbjct: 498  EKPLG-DLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFR 556

Query: 1009 GRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRRLN 830
            GRAYPMH HLNHL+SDLCRG+LEFAEG+PLGKSGLHWLKIHLAN+Y GGVEKLSYD RL 
Sbjct: 557  GRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLA 616

Query: 829  FIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIHQD 650
            F+++HL +IF+SA +P+ G RWW+TAEDPFQCLAAC++L +ALKS  PHT +S+LPIHQD
Sbjct: 617  FVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQD 676

Query: 649  GSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPAAL 470
            GSCNGLQHYAALGR++LEAAAVNLVAGEKP DVYS IA RV  IM +D+ KDP   P A 
Sbjct: 677  GSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNAS 736

Query: 469  LAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAAKV 290
            LAK+LI+QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLEEKG+I DD+L FRASCYAAKV
Sbjct: 737  LAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAKV 796

Query: 289  TFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQ 110
            T  ALGE+F+AAR IM WLGDCAK+IA +N+PVRWTTPLGLPVVQPY  SERHLIRTSLQ
Sbjct: 797  TLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQ 856

Query: 109  VLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            VL+LQREG  V V++Q+  FPPNFVHSLDGSHMM+T
Sbjct: 857  VLALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLT 892


>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score =  686 bits (1770), Expect = 0.0
 Identities = 330/456 (72%), Positives = 385/456 (84%)
 Frame = -3

Query: 1369 QQDAIRSVPRKQLKKVFEALDTLGRTKWRINKRILDVVEILWSQGGGIAGLVNRKDIQLS 1190
            QQDA++++  KQ++KVFEALD LG TKWR+N+ +L VVE LW+QGG  AGLV+RKD+ + 
Sbjct: 438  QQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKDVPIP 497

Query: 1189 DRPDSEDLNEIXXXXXXXXXXXXXNSEMHSLRCDIELKLSVACKLSSEEGFYYPHNLDFR 1010
            ++P   DL E+             N E+HS RCD+ELKLSVA K+  EEGFYYPHNLDFR
Sbjct: 498  EKPLG-DLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFR 556

Query: 1009 GRAYPMHSHLNHLNSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGGVEKLSYDRRLN 830
            GRAYPMH HLNHL+SDLCRG+LEFAEG+PLGKSGLHWLKIHLAN+Y GGVEKLSYD RL 
Sbjct: 557  GRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLA 616

Query: 829  FIENHLTDIFNSAEDPICGKRWWITAEDPFQCLAACIDLRDALKSPLPHTTVSHLPIHQD 650
            F+++HL +IF+SA +P+ G RWW+TAEDPFQCLAAC++L +ALKS  PHT +S+LPIHQD
Sbjct: 617  FVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQD 676

Query: 649  GSCNGLQHYAALGRNSLEAAAVNLVAGEKPEDVYSGIAIRVLEIMQKDSEKDPNVVPAAL 470
            GSCNGLQHYAALGR++LEAAAVNLVAGEKP DVYS IA RV  IM +D+ KDP   P A 
Sbjct: 677  GSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNAS 736

Query: 469  LAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIKDDKLLFRASCYAAKV 290
            LAK+LI+QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLEEKG+I DD+L FRASCYAAKV
Sbjct: 737  LAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAKV 796

Query: 289  TFDALGEMFQAARNIMKWLGDCAKIIASENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQ 110
            T  ALGE+F+AAR IM WLGDCAK+IA +N+PVRWTTPLGLPVVQPY  SERHLIRTSLQ
Sbjct: 797  TLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQ 856

Query: 109  VLSLQREGQSVSVKRQKMGFPPNFVHSLDGSHMMMT 2
            VL+LQREG  V V++Q+  FPPNFVHSLDGSHMM+T
Sbjct: 857  VLALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLT 892