BLASTX nr result

ID: Zingiber24_contig00021319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00021319
         (952 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vi...    58   5e-06

>ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vitis vinifera]
           gi|147810449|emb|CAN65336.1| hypothetical protein
           VITISV_023849 [Vitis vinifera]
          Length = 165

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 13/148 (8%)
 Frame = -1

Query: 634 TYWSMRASDFLSISIHTEPNY--PTSFTTQRGTPVSLIETLGRVVRLQRTPLT-LTIRIY 464
           T+  + A D LS++    P+   P SF+ +RGTP+S  ETLG V   +  P   L   + 
Sbjct: 8   THVKLLAFDLLSLTQTPSPSSSDPISFS-RRGTPLSRAETLGTVTSRELKPHKFLKFTVD 66

Query: 463 DGSCQIPCIQTLEPAHGTYVS----------PDIARRQAEPVELGKLVRVLGKLDLGPDG 314
           DG+  +PC+  L      Y S           D+A  QA  V+LG LVRV G++     G
Sbjct: 67  DGTGCVPCVLWLNHLSSPYFSRRNPADVRLIADLAEYQASEVKLGVLVRVRGRI-TAYRG 125

Query: 313 ALQLIDCYFMVEHRPDADTPHIYNCMLL 230
            +Q+     +VE  P+ +  H  +C+ L
Sbjct: 126 TVQITVSNVIVERDPNMEILHWLDCIKL 153


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