BLASTX nr result

ID: Zingiber24_contig00021204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00021204
         (711 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN87733.1| Hypothetical protein [Oryza sativa Japonica Group...    64   5e-08
ref|NP_001048967.1| Os03g0148400 [Oryza sativa Japonica Group] g...    64   5e-08

>gb|AAN87733.1| Hypothetical protein [Oryza sativa Japonica Group]
           gi|108706194|gb|ABF93989.1| expressed protein [Oryza
           sativa Japonica Group]
          Length = 445

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 58/213 (27%), Positives = 80/213 (37%), Gaps = 1/213 (0%)
 Frame = -1

Query: 636 LSRCVRHPAQLFIGFCPTCLVERLSNVGTAEQSVEEPRDTQSEIIEIPGVVPDVKSKTSE 457
           + RC RHP+Q+F G C TCL+ERLS+V    +  EE      EI+E+        S    
Sbjct: 33  VERCGRHPSQVFTGVCSTCLMERLSSVRNPAEEEEE------EIVEVGTADAGEGSSADH 86

Query: 456 IRTRKTLQYLFQLGDDLDVDGTIRRVPDKTLPSTSNACEFEICTDDGNCSKDANVKISSC 277
            + RKTL  LFQL D                 S S +        D    + A+ ++   
Sbjct: 87  GKLRKTLMLLFQLDD-----------------SCSGSAVGAAHPADAKDPQVADFEVDPG 129

Query: 276 GGTKMMENDVNSYEGITISAYIAKEISDSEKRKQKNGGVTLWLKLIFVKKGFSWRTRSIS 97
           GG +                            K K G    WL+ I  +KG  W  R   
Sbjct: 130 GGNR--------------------------GAKWKGGA---WLRSILPRKGMRWSRRKEP 160

Query: 96  KKEEMPDGKTSCVSEDN-QSESNLNLRQSCDWM 1
            +   P       + DN Q E   + R+SC+WM
Sbjct: 161 PRPPRPRPVDPDGAGDNAQVERKPSFRRSCEWM 193


>ref|NP_001048967.1| Os03g0148400 [Oryza sativa Japonica Group]
           gi|113547438|dbj|BAF10881.1| Os03g0148400, partial
           [Oryza sativa Japonica Group]
          Length = 442

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 58/213 (27%), Positives = 80/213 (37%), Gaps = 1/213 (0%)
 Frame = -1

Query: 636 LSRCVRHPAQLFIGFCPTCLVERLSNVGTAEQSVEEPRDTQSEIIEIPGVVPDVKSKTSE 457
           + RC RHP+Q+F G C TCL+ERLS+V    +  EE      EI+E+        S    
Sbjct: 30  VERCGRHPSQVFTGVCSTCLMERLSSVRNPAEEEEE------EIVEVGTADAGEGSSADH 83

Query: 456 IRTRKTLQYLFQLGDDLDVDGTIRRVPDKTLPSTSNACEFEICTDDGNCSKDANVKISSC 277
            + RKTL  LFQL D                 S S +        D    + A+ ++   
Sbjct: 84  GKLRKTLMLLFQLDD-----------------SCSGSAVGAAHPADAKDPQVADFEVDPG 126

Query: 276 GGTKMMENDVNSYEGITISAYIAKEISDSEKRKQKNGGVTLWLKLIFVKKGFSWRTRSIS 97
           GG +                            K K G    WL+ I  +KG  W  R   
Sbjct: 127 GGNR--------------------------GAKWKGGA---WLRSILPRKGMRWSRRKEP 157

Query: 96  KKEEMPDGKTSCVSEDN-QSESNLNLRQSCDWM 1
            +   P       + DN Q E   + R+SC+WM
Sbjct: 158 PRPPRPRPVDPDGAGDNAQVERKPSFRRSCEWM 190


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