BLASTX nr result
ID: Zingiber24_contig00021115
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00021115
(546 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003564161.1| PREDICTED: RING-H2 finger protein ATL3-like ... 80 3e-13
gb|AEJ07938.1| ring-H2 zinc finger protein [Zea diploperennis] 79 7e-13
gb|AFV13468.1| ring-H2 zinc finger protein [Coix lacryma-jobi] 76 6e-12
gb|AAV64219.1| znf [Zea mays] 75 1e-11
gb|AFW85496.1| putative RING zinc finger domain superfamily prot... 75 1e-11
gb|AEJ07933.1| ring-H2 zinc finger protein [Zea mays subsp. mexi... 75 1e-11
gb|ACA21860.1| ring-H2 zinc finger protein [Zea mays] 75 1e-11
gb|ABF67955.1| ring-H2 zinc finger protein [Zea mays] 75 1e-11
gb|ABF67937.1| ring-H2 zinc finger protein [Zea mays] gi|9986673... 75 1e-11
gb|ABF67923.1| ring-H2 zinc finger protein [Zea mays] 75 1e-11
gb|ABF67914.1| ring-H2 zinc finger protein [Zea mays] 75 1e-11
gb|AAL59234.1|AF448416_14 ring-H2 zinc finger protein [Zea mays] 75 1e-11
gb|AAM71248.1| ring-H2 zinc finger protein [Zea mays] 75 1e-11
gb|AFW76603.1| putative RING zinc finger domain superfamily prot... 73 5e-11
ref|XP_002436629.1| hypothetical protein SORBIDRAFT_10g006200 [S... 70 3e-10
gb|AEJ07954.1| ring-H2 zinc finger protein [Sorghum propinquum] 69 6e-10
gb|EMJ17020.1| hypothetical protein PRUPE_ppa010059mg [Prunus pe... 64 2e-08
>ref|XP_003564161.1| PREDICTED: RING-H2 finger protein ATL3-like [Brachypodium
distachyon]
Length = 316
Score = 80.1 bits (196), Expect = 3e-13
Identities = 61/162 (37%), Positives = 72/162 (44%), Gaps = 36/162 (22%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXX-------NVLIRGGRDP 160
DMWFHSH TCPLCR+ V +D G NVL G D
Sbjct: 135 DMWFHSHDTCPLCRAPVGSDAGAGELVAAESLPRVPREDPAVVEFPMFPTNVLFWGTHDD 194
Query: 161 VNERA--------------------------LVIEIPRNAVDVLGPQTSPLPSSR---AA 253
V LVI+IP V V G +SPLP+SR A
Sbjct: 195 VANTGHGFPAAPPPIAAASTSSSGSARRMENLVIDIPPRPVAV-GASSSPLPASRMPGTA 253
Query: 254 LEELRSPVSATFRSLRRLWSQGRKASAGPSSFSSREVDVEQG 379
++LRSP+SA RSLRRL S+G+ A G S+ S R DVEQG
Sbjct: 254 ADDLRSPLSARLRSLRRLLSRGKHAVVGTSNSSPRGGDVEQG 295
>gb|AEJ07938.1| ring-H2 zinc finger protein [Zea diploperennis]
Length = 295
Score = 79.0 bits (193), Expect = 7e-13
Identities = 61/155 (39%), Positives = 73/155 (47%), Gaps = 27/155 (17%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPVNERALV 181
DMWFHSH TCPLCR+ V NVL G D V LV
Sbjct: 125 DMWFHSHDTCPLCRAPV---GDLDALPREEPSGAPLEFPVFPTNVLFWGTHDEVTNAGLV 181
Query: 182 ----------------------IEIPRNAV--DVLGPQTSPLPSSR--AALEELRSPVSA 283
I+IP AV + L P SPLP+SR + +E+RSPVSA
Sbjct: 182 APPRVASAASSSASGRRKENLVIDIPTRAVATNTLPPANSPLPASRMPGSADEMRSPVSA 241
Query: 284 TFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 385
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 242 RLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 274
>gb|AFV13468.1| ring-H2 zinc finger protein [Coix lacryma-jobi]
Length = 308
Score = 75.9 bits (185), Expect = 6e-12
Identities = 62/164 (37%), Positives = 74/164 (45%), Gaps = 36/164 (21%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXX-NVLIRGGRDPVNERAL 178
DMWFHSH TCPLCR+ V A G NVL G D V L
Sbjct: 131 DMWFHSHDTCPLCRAPVGAGAGDLDALPREDPSAASLEFPVFPTNVLFWGTHDEVTNAGL 190
Query: 179 ----------------------------VIEIPRNAVDV-LGPQTSPLPSSR----AALE 259
VI+IP V + P SPLP+SR AA +
Sbjct: 191 ATPPLQPPVATAASAASSSASGRRKENLVIDIPTRPVALNTPPMNSPLPASRMPGSAAAD 250
Query: 260 ELRSPVSATFRSLRRLWSQGRKASAGPSSFSSR--EVDVEQGPA 385
E+RSPVSA RSLRRL S+G++A G +S+S R D+EQG A
Sbjct: 251 EMRSPVSARLRSLRRLLSRGKQAVVG-TSYSPRAGAGDIEQGLA 293
>gb|AAV64219.1| znf [Zea mays]
Length = 337
Score = 75.1 bits (183), Expect = 1e-11
Identities = 60/157 (38%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPVNERALV 181
DMWFHSH TCPLCR+ V NVL G D V LV
Sbjct: 161 DMWFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLV 217
Query: 182 ----------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPV 277
I+IP AV P SPLP+SR + +E+RSPV
Sbjct: 218 APPRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPV 277
Query: 278 SATFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 385
SA RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 278 SARLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 312
>gb|AFW85496.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 331
Score = 75.1 bits (183), Expect = 1e-11
Identities = 60/157 (38%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPVNERALV 181
DMWFHSH TCPLCR+ V NVL G D V LV
Sbjct: 155 DMWFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLV 211
Query: 182 ----------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPV 277
I+IP AV P SPLP+SR + +E+RSPV
Sbjct: 212 APPRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPV 271
Query: 278 SATFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 385
SA RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 272 SARLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 306
>gb|AEJ07933.1| ring-H2 zinc finger protein [Zea mays subsp. mexicana]
Length = 302
Score = 75.1 bits (183), Expect = 1e-11
Identities = 60/157 (38%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPVNERALV 181
DMWFHSH TCPLCR+ V NVL G D V LV
Sbjct: 128 DMWFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLV 184
Query: 182 ----------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPV 277
I+IP AV P SPLP+SR + +E+RSPV
Sbjct: 185 APPRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPV 244
Query: 278 SATFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 385
SA RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 245 SARLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|ACA21860.1| ring-H2 zinc finger protein [Zea mays]
Length = 298
Score = 75.1 bits (183), Expect = 1e-11
Identities = 60/157 (38%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPVNERALV 181
DMWFHSH TCPLCR+ V NVL G D V LV
Sbjct: 126 DMWFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLV 182
Query: 182 ----------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPV 277
I+IP AV P SPLP+SR + +E+RSPV
Sbjct: 183 APPRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPV 242
Query: 278 SATFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 385
SA RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 243 SARLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 277
>gb|ABF67955.1| ring-H2 zinc finger protein [Zea mays]
Length = 300
Score = 75.1 bits (183), Expect = 1e-11
Identities = 60/157 (38%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPVNERALV 181
DMWFHSH TCPLCR+ V NVL G D V LV
Sbjct: 128 DMWFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLV 184
Query: 182 ----------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPV 277
I+IP AV P SPLP+SR + +E+RSPV
Sbjct: 185 APPRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPV 244
Query: 278 SATFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 385
SA RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 245 SARLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|ABF67937.1| ring-H2 zinc finger protein [Zea mays] gi|99866730|gb|ABF67943.1|
ring-H2 zinc finger protein [Zea mays]
gi|338808415|gb|AEJ07918.1| ring-H2 zinc finger protein
[Zea mays]
Length = 304
Score = 75.1 bits (183), Expect = 1e-11
Identities = 60/157 (38%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPVNERALV 181
DMWFHSH TCPLCR+ V NVL G D V LV
Sbjct: 128 DMWFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLV 184
Query: 182 ----------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPV 277
I+IP AV P SPLP+SR + +E+RSPV
Sbjct: 185 APPRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPV 244
Query: 278 SATFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 385
SA RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 245 SARLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|ABF67923.1| ring-H2 zinc finger protein [Zea mays]
Length = 304
Score = 75.1 bits (183), Expect = 1e-11
Identities = 60/157 (38%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPVNERALV 181
DMWFHSH TCPLCR+ V NVL G D V LV
Sbjct: 128 DMWFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLV 184
Query: 182 ----------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPV 277
I+IP AV P SPLP+SR + +E+RSPV
Sbjct: 185 APPRAATSASSSASGRRKENLIIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPV 244
Query: 278 SATFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 385
SA RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 245 SARLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|ABF67914.1| ring-H2 zinc finger protein [Zea mays]
Length = 302
Score = 75.1 bits (183), Expect = 1e-11
Identities = 60/157 (38%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPVNERALV 181
DMWFHSH TCPLCR+ V NVL G D V LV
Sbjct: 128 DMWFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLV 184
Query: 182 ----------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPV 277
I+IP AV P SPLP+SR + +E+RSPV
Sbjct: 185 APPRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPV 244
Query: 278 SATFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 385
SA RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 245 SARLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|AAL59234.1|AF448416_14 ring-H2 zinc finger protein [Zea mays]
Length = 304
Score = 75.1 bits (183), Expect = 1e-11
Identities = 60/157 (38%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPVNERALV 181
DMWFHSH TCPLCR+ V NVL G D V LV
Sbjct: 128 DMWFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLV 184
Query: 182 ----------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPV 277
I+IP AV P SPLP+SR + +E+RSPV
Sbjct: 185 APPRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPV 244
Query: 278 SATFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 385
SA RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 245 SARLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|AAM71248.1| ring-H2 zinc finger protein [Zea mays]
Length = 304
Score = 75.1 bits (183), Expect = 1e-11
Identities = 60/157 (38%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPVNERALV 181
DMWFHSH TCPLCR+ V NVL G D V LV
Sbjct: 128 DMWFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLV 184
Query: 182 ----------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPV 277
I+IP AV P SPLP+SR + +E+RSPV
Sbjct: 185 APPRAATSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPV 244
Query: 278 SATFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 385
SA RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 245 SARLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|AFW76603.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 331
Score = 72.8 bits (177), Expect = 5e-11
Identities = 58/160 (36%), Positives = 68/160 (42%), Gaps = 32/160 (20%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPV------ 163
DMWFHSH TCPLCR+ V D NVL G D V
Sbjct: 162 DMWFHSHDTCPLCRAPVGGD-----LDALPREEPFGASLEFPTNVLFWGTHDEVANAGLA 216
Query: 164 ----------------------NERALVIEIPRN--AVDVLGPQTSPLPSSRA--ALEEL 265
+ LVI+IP A+ P SPLP+SR + +E
Sbjct: 217 TPPPPPPPVASAVSASSSASGRRKENLVIDIPTRPVALTTTPPFNSPLPASRVPGSADET 276
Query: 266 RSPVSATFRSLRRLWSQGRKASAGPSSFSSREVDVEQGPA 385
RSPVSA RSLRRL S+G++A G S DVEQG A
Sbjct: 277 RSPVSARLRSLRRLLSRGKQAVVGTSYSPRGAGDVEQGLA 316
>ref|XP_002436629.1| hypothetical protein SORBIDRAFT_10g006200 [Sorghum bicolor]
gi|241914852|gb|EER87996.1| hypothetical protein
SORBIDRAFT_10g006200 [Sorghum bicolor]
Length = 357
Score = 70.1 bits (170), Expect = 3e-10
Identities = 60/170 (35%), Positives = 72/170 (42%), Gaps = 42/170 (24%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVV-ADEGXXXXXXXXXXXXXXXXXXXXX-NVLIRGGRDPVN--- 166
DMWFHSH TCPLCR+ V A G NVL G D V
Sbjct: 169 DMWFHSHDTCPLCRAPVGGAGAGELDALPREEPSGASLEFPVFPTNVLFWGTNDEVTNAG 228
Query: 167 -----------------------------ERALVIEIPRNAVDV-LGPQTSPLPSSR--A 250
E LVI+IP V + P SPLP+SR
Sbjct: 229 LATPPPPPPHPIASAAASASSSASSGRRKENQLVIDIPTRPVALNTPPMNSPLPASRMPG 288
Query: 251 ALEELRSPVSATFRSLRRLWSQGRKASAGPSSFS-----SREVDVEQGPA 385
+++RSPVSA RSLRRL S+G++A G SS+S D+EQG A
Sbjct: 289 TADDMRSPVSARLRSLRRLLSRGKQAVVGTSSYSPSPRGGAGGDIEQGIA 338
>gb|AEJ07954.1| ring-H2 zinc finger protein [Sorghum propinquum]
Length = 326
Score = 69.3 bits (168), Expect = 6e-10
Identities = 60/172 (34%), Positives = 72/172 (41%), Gaps = 44/172 (25%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVV-ADEGXXXXXXXXXXXXXXXXXXXXX-NVLIRGGRDPVN--- 166
DMWFHSH TCPLCR+ V A G NVL G D V
Sbjct: 136 DMWFHSHDTCPLCRAPVGGAGAGELDALPREEPSGASLEFPVFPTNVLFWGTNDEVTNAG 195
Query: 167 -------------------------------ERALVIEIPRNAVDV-LGPQTSPLPSSR- 247
E LVI+IP V + P SPLP+SR
Sbjct: 196 LATPPPPPPHPIASASAAASASSSASSGRRKENQLVIDIPTRPVALNTPPMNSPLPASRM 255
Query: 248 -AALEELRSPVSATFRSLRRLWSQGRKASAGPSSFS-----SREVDVEQGPA 385
+++RSPVSA RSLRRL S+G++A G SS+S D+EQG A
Sbjct: 256 PGTADDMRSPVSARLRSLRRLLSRGKQAVVGTSSYSPSPRGGAGGDIEQGIA 307
>gb|EMJ17020.1| hypothetical protein PRUPE_ppa010059mg [Prunus persica]
Length = 266
Score = 63.9 bits (154), Expect = 2e-08
Identities = 48/128 (37%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Frame = +2
Query: 2 DMWFHSHSTCPLCRSAVVADEGXXXXXXXXXXXXXXXXXXXXXNVLIRGGRDPVNERALV 181
DMWF SHSTCP+CR+ V + + P + LV
Sbjct: 140 DMWFQSHSTCPICRNPVAPESSVDSGAAGSSSALAESDSVQILSPAESLASGP--DGMLV 197
Query: 182 IEIPRNAVDVLGPQTSPLPSSR--AALEELRSPVSATFRSLRRLWSQGRKASAGPSSFSS 355
I+IP + + P SP PS AA E+L+SP + RSL+RL S+ R+ S P S SS
Sbjct: 198 IDIP-SQTSLASPSPSPSPSGNRFAADEDLKSPATTRLRSLKRLLSRDRRIS--PCSPSS 254
Query: 356 REVDVEQG 379
VDVEQG
Sbjct: 255 --VDVEQG 260