BLASTX nr result

ID: Zingiber24_contig00020933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00020933
         (220 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277964.1| PREDICTED: uncharacterized protein LOC100250...    55   7e-06
emb|CAN63851.1| hypothetical protein VITISV_016796 [Vitis vinifera]    55   7e-06
ref|XP_002527671.1| protein with unknown function [Ricinus commu...    55   1e-05
ref|XP_002326528.1| predicted protein [Populus trichocarpa] gi|5...    55   1e-05
gb|ABK96276.1| unknown [Populus trichocarpa x Populus deltoides]       55   1e-05

>ref|XP_002277964.1| PREDICTED: uncharacterized protein LOC100250554 [Vitis vinifera]
           gi|297742091|emb|CBI33878.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +3

Query: 3   PPPTAASCRSAKRRKGIPHRAPFGSLIVEYF 95
           PPPTA + R+AKRRKGIPHRAP G LI+EY+
Sbjct: 232 PPPTAVNYRTAKRRKGIPHRAPMGGLIIEYY 262


>emb|CAN63851.1| hypothetical protein VITISV_016796 [Vitis vinifera]
          Length = 244

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +3

Query: 3   PPPTAASCRSAKRRKGIPHRAPFGSLIVEYF 95
           PPPTA + R+AKRRKGIPHRAP G LI+EY+
Sbjct: 214 PPPTAVNYRTAKRRKGIPHRAPMGGLIIEYY 244


>ref|XP_002527671.1| protein with unknown function [Ricinus communis]
           gi|223532976|gb|EEF34742.1| protein with unknown
           function [Ricinus communis]
          Length = 223

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +3

Query: 3   PPPTAASCRSAKRRKGIPHRAPFGSLIVEYF 95
           PPPT+ S RSAKRRKGIPHRAP G LI+E++
Sbjct: 193 PPPTSVSYRSAKRRKGIPHRAPMGGLIIEFY 223


>ref|XP_002326528.1| predicted protein [Populus trichocarpa]
           gi|566146777|ref|XP_006368393.1| zinc-binding family
           protein [Populus trichocarpa]
           gi|550346306|gb|ERP64962.1| zinc-binding family protein
           [Populus trichocarpa]
          Length = 231

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/30 (80%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   PPPTAASCRSAKRRKGIPHRAPFGSLIVEY 92
           PPPT AS R+AKRRKGIPHRAP G LI+EY
Sbjct: 202 PPPTPASYRTAKRRKGIPHRAPMGGLIIEY 231


>gb|ABK96276.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 231

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/30 (80%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   PPPTAASCRSAKRRKGIPHRAPFGSLIVEY 92
           PPPT AS R+AKRRKGIPHRAP G LI+EY
Sbjct: 202 PPPTPASYRTAKRRKGIPHRAPMGGLIIEY 231


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