BLASTX nr result

ID: Zingiber24_contig00020929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00020929
         (229 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308941.2| Villin 2 family protein [Populus trichocarpa...    56   4e-06

>ref|XP_002308941.2| Villin 2 family protein [Populus trichocarpa]
            gi|550335478|gb|EEE92464.2| Villin 2 family protein
            [Populus trichocarpa]
          Length = 950

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
 Frame = -1

Query: 226  TRTQSFESGLEDLVEISTEKEDNADDQTYGSHVVDSEEKRDQDIVEYD---GESTYSYER 56
            + TQS   G E + E+   +E  +  ++ G    DSE K+D +  E D   G+ST+SY++
Sbjct: 839  SETQSEVEGSEGVAEVKEMEETASVPESNGE---DSERKQDTEQEENDDGNGQSTFSYDQ 895

Query: 55   LKSNSSYPVRGIDYKRRE 2
            LK++S  PV+GID+KRRE
Sbjct: 896  LKAHSDNPVKGIDFKRRE 913


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