BLASTX nr result

ID: Zingiber24_contig00020873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00020873
         (232 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350739.1| PREDICTED: probable NOT transcription comple...   102   5e-20
ref|XP_004294625.1| PREDICTED: probable NOT transcription comple...   102   5e-20
emb|CBI34721.3| unnamed protein product [Vitis vinifera]              102   7e-20
ref|XP_002283316.1| PREDICTED: probable NOT transcription comple...   102   7e-20
ref|XP_006597300.1| PREDICTED: probable NOT transcription comple...   101   9e-20
ref|XP_006597299.1| PREDICTED: probable NOT transcription comple...   101   9e-20
ref|XP_006597298.1| PREDICTED: probable NOT transcription comple...   101   9e-20
ref|XP_006597297.1| PREDICTED: probable NOT transcription comple...   101   9e-20
ref|XP_004241255.1| PREDICTED: probable NOT transcription comple...   101   9e-20
ref|XP_002530232.1| CCR4-NOT transcription complex subunit, puta...   101   9e-20
ref|XP_004487045.1| PREDICTED: probable NOT transcription comple...   101   1e-19
ref|XP_004487044.1| PREDICTED: probable NOT transcription comple...   101   1e-19
ref|XP_006592257.1| PREDICTED: probable NOT transcription comple...   100   2e-19
ref|XP_006592256.1| PREDICTED: probable NOT transcription comple...   100   2e-19
ref|XP_006592255.1| PREDICTED: probable NOT transcription comple...   100   2e-19
ref|XP_006591002.1| PREDICTED: probable NOT transcription comple...   100   2e-19
ref|XP_006591001.1| PREDICTED: probable NOT transcription comple...   100   2e-19
ref|XP_006590998.1| PREDICTED: probable NOT transcription comple...   100   2e-19
ref|XP_006350740.1| PREDICTED: probable NOT transcription comple...   100   2e-19
gb|ESW04127.1| hypothetical protein PHAVU_011G069400g [Phaseolus...   100   2e-19

>ref|XP_006350739.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X2 [Solanum tuberosum]
          Length = 658

 Score =  102 bits (254), Expect = 5e-20
 Identities = 53/78 (67%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++D+++DLHQKEQLH+N IS MQ QH      QM RSGG
Sbjct: 307 QNQEFSIQNEDFPALPGFKGGNADYAMDLHQKEQLHDNTISMMQQQHFS---AQMGRSGG 363

Query: 180 FSLGGTFQS-NLQQQQLH 230
           F+LGGT+ S   QQQQ H
Sbjct: 364 FNLGGTYSSLRSQQQQQH 381


>ref|XP_004294625.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           [Fragaria vesca subsp. vesca]
          Length = 664

 Score =  102 bits (254), Expect = 5e-20
 Identities = 50/75 (66%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG+SD+ +D+HQKEQLH+N +S MQSQH P     M RS G
Sbjct: 313 QNQEFSIQNEDFPALPGFKGGNSDYPMDMHQKEQLHDNTVSMMQSQHFP-----MGRSAG 367

Query: 180 FSLGGTFQSNLQQQQ 224
           F+LGGT+ S+  QQQ
Sbjct: 368 FNLGGTYSSHRPQQQ 382


>emb|CBI34721.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  102 bits (253), Expect = 7e-20
 Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++DF VD H+KEQLH++ +S MQSQH P     M RSGG
Sbjct: 280 QNQEFSIQNEDFPALPGFKGGNTDFPVDSHRKEQLHDSAVSMMQSQHFP-----MGRSGG 334

Query: 180 FSLGGTFQSNLQQQQLH 230
           F+LG  + S+LQQQQ H
Sbjct: 335 FNLGVPYSSHLQQQQQH 351


>ref|XP_002283316.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           [Vitis vinifera]
          Length = 605

 Score =  102 bits (253), Expect = 7e-20
 Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++DF VD H+KEQLH++ +S MQSQH P     M RSGG
Sbjct: 273 QNQEFSIQNEDFPALPGFKGGNTDFPVDSHRKEQLHDSAVSMMQSQHFP-----MGRSGG 327

Query: 180 FSLGGTFQSNLQQQQLH 230
           F+LG  + S+LQQQQ H
Sbjct: 328 FNLGVPYSSHLQQQQQH 344


>ref|XP_006597300.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X5 [Glycine max]
          Length = 625

 Score =  101 bits (252), Expect = 9e-20
 Identities = 52/78 (66%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG+SDF++D++QKEQLH+N +S MQSQH     +QM RS G
Sbjct: 273 QNQEFSIQNEDFPALPGFKGGNSDFAMDMYQKEQLHDNTVSMMQSQH----FSQMGRSAG 328

Query: 180 FSLGGTFQSN-LQQQQLH 230
           FSLGG++ S+  QQQQ H
Sbjct: 329 FSLGGSYPSHRTQQQQQH 346


>ref|XP_006597299.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X4 [Glycine max]
          Length = 650

 Score =  101 bits (252), Expect = 9e-20
 Identities = 52/78 (66%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG+SDF++D++QKEQLH+N +S MQSQH     +QM RS G
Sbjct: 298 QNQEFSIQNEDFPALPGFKGGNSDFAMDMYQKEQLHDNTVSMMQSQH----FSQMGRSAG 353

Query: 180 FSLGGTFQSN-LQQQQLH 230
           FSLGG++ S+  QQQQ H
Sbjct: 354 FSLGGSYPSHRTQQQQQH 371


>ref|XP_006597298.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X3 [Glycine max]
          Length = 656

 Score =  101 bits (252), Expect = 9e-20
 Identities = 52/78 (66%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG+SDF++D++QKEQLH+N +S MQSQH     +QM RS G
Sbjct: 304 QNQEFSIQNEDFPALPGFKGGNSDFAMDMYQKEQLHDNTVSMMQSQH----FSQMGRSAG 359

Query: 180 FSLGGTFQSN-LQQQQLH 230
           FSLGG++ S+  QQQQ H
Sbjct: 360 FSLGGSYPSHRTQQQQQH 377


>ref|XP_006597297.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X2 [Glycine max]
          Length = 663

 Score =  101 bits (252), Expect = 9e-20
 Identities = 52/78 (66%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG+SDF++D++QKEQLH+N +S MQSQH     +QM RS G
Sbjct: 311 QNQEFSIQNEDFPALPGFKGGNSDFAMDMYQKEQLHDNTVSMMQSQH----FSQMGRSAG 366

Query: 180 FSLGGTFQSN-LQQQQLH 230
           FSLGG++ S+  QQQQ H
Sbjct: 367 FSLGGSYPSHRTQQQQQH 384


>ref|XP_004241255.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform 1 [Solanum lycopersicum]
          Length = 658

 Score =  101 bits (252), Expect = 9e-20
 Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++D+ +DLHQKEQLH+N IS MQ QH      QM RSGG
Sbjct: 307 QNQEFSIQNEDFPALPGFKGGNADYPMDLHQKEQLHDNTISMMQQQHFS---AQMGRSGG 363

Query: 180 FSLGGTFQS-NLQQQQLH 230
           F+LGGT+ S   QQQQ H
Sbjct: 364 FNLGGTYSSLRSQQQQQH 381


>ref|XP_002530232.1| CCR4-NOT transcription complex subunit, putative [Ricinus communis]
           gi|223530236|gb|EEF32138.1| CCR4-NOT transcription
           complex subunit, putative [Ricinus communis]
          Length = 664

 Score =  101 bits (252), Expect = 9e-20
 Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++D+S+DLHQKEQLH+N +S MQSQH P     M RS G
Sbjct: 315 QNQEFSIQNEDFPALPGFKGGNADYSMDLHQKEQLHDNTMSMMQSQHFP-----MGRSAG 369

Query: 180 FSLGGTFQS-NLQQQQLH 230
           F+LGG F S   QQQQ H
Sbjct: 370 FNLGGNFSSYRPQQQQQH 387


>ref|XP_004487045.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X2 [Cicer arietinum]
          Length = 623

 Score =  101 bits (251), Expect = 1e-19
 Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPGYKGGS+DF++D+HQKEQLH+N +S MQSQH       M RS G
Sbjct: 273 QNQEFSIQNEDFPALPGYKGGSADFTMDMHQKEQLHDNAMSMMQSQHF-----SMGRSAG 327

Query: 180 FSLGGTFQSN-LQQQQLH 230
           FSLGG++ ++  QQQQ H
Sbjct: 328 FSLGGSYSAHRTQQQQQH 345


>ref|XP_004487044.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X1 [Cicer arietinum]
          Length = 661

 Score =  101 bits (251), Expect = 1e-19
 Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPGYKGGS+DF++D+HQKEQLH+N +S MQSQH       M RS G
Sbjct: 311 QNQEFSIQNEDFPALPGYKGGSADFTMDMHQKEQLHDNAMSMMQSQHF-----SMGRSAG 365

Query: 180 FSLGGTFQSN-LQQQQLH 230
           FSLGG++ ++  QQQQ H
Sbjct: 366 FSLGGSYSAHRTQQQQQH 383


>ref|XP_006592257.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X4 [Glycine max]
          Length = 599

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++D+++D+HQKEQLH+N +  MQSQH       M RS G
Sbjct: 250 QNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHF-----SMGRSAG 304

Query: 180 FSLGGTFQSNLQQQQLH 230
           FSLGGT+ S+  QQQ H
Sbjct: 305 FSLGGTYSSHRAQQQQH 321


>ref|XP_006592256.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X3 [Glycine max]
          Length = 620

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++D+++D+HQKEQLH+N +  MQSQH       M RS G
Sbjct: 271 QNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHF-----SMGRSAG 325

Query: 180 FSLGGTFQSNLQQQQLH 230
           FSLGGT+ S+  QQQ H
Sbjct: 326 FSLGGTYSSHRAQQQQH 342


>ref|XP_006592255.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X2 [Glycine max]
          Length = 645

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++D+++D+HQKEQLH+N +  MQSQH       M RS G
Sbjct: 296 QNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHF-----SMGRSAG 350

Query: 180 FSLGGTFQSNLQQQQLH 230
           FSLGGT+ S+  QQQ H
Sbjct: 351 FSLGGTYSSHRAQQQQH 367


>ref|XP_006591002.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X6 [Glycine max]
          Length = 565

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++D+++D+HQKEQLH+N +  MQSQH       M RS G
Sbjct: 311 QNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNTVPMMQSQHF-----SMGRSAG 365

Query: 180 FSLGGTFQSNLQQQQLH 230
           FSLGGT+ S+  QQQ H
Sbjct: 366 FSLGGTYSSHRAQQQQH 382


>ref|XP_006591001.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X5 [Glycine max]
          Length = 622

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++D+++D+HQKEQLH+N +  MQSQH       M RS G
Sbjct: 273 QNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNTVPMMQSQHF-----SMGRSAG 327

Query: 180 FSLGGTFQSNLQQQQLH 230
           FSLGGT+ S+  QQQ H
Sbjct: 328 FSLGGTYSSHRAQQQQH 344


>ref|XP_006590998.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X2 [Glycine max]
           gi|571488682|ref|XP_006590999.1| PREDICTED: probable NOT
           transcription complex subunit VIP2-like isoform X3
           [Glycine max] gi|571488684|ref|XP_006591000.1|
           PREDICTED: probable NOT transcription complex subunit
           VIP2-like isoform X4 [Glycine max]
          Length = 660

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++D+++D+HQKEQLH+N +  MQSQH       M RS G
Sbjct: 311 QNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNTVPMMQSQHF-----SMGRSAG 365

Query: 180 FSLGGTFQSNLQQQQLH 230
           FSLGGT+ S+  QQQ H
Sbjct: 366 FSLGGTYSSHRAQQQQH 382


>ref|XP_006350740.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X3 [Solanum tuberosum]
          Length = 656

 Score =  100 bits (250), Expect = 2e-19
 Identities = 52/78 (66%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++D+++DLHQKEQLH+N IS MQ QH       M RSGG
Sbjct: 307 QNQEFSIQNEDFPALPGFKGGNADYAMDLHQKEQLHDNTISMMQQQHF-----SMGRSGG 361

Query: 180 FSLGGTFQS-NLQQQQLH 230
           F+LGGT+ S   QQQQ H
Sbjct: 362 FNLGGTYSSLRSQQQQQH 379


>gb|ESW04127.1| hypothetical protein PHAVU_011G069400g [Phaseolus vulgaris]
           gi|561005134|gb|ESW04128.1| hypothetical protein
           PHAVU_011G069400g [Phaseolus vulgaris]
          Length = 658

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   QNHEFSIQNEDFPALPGYKGGSSDFSVDLHQKEQLHEN-ISTMQSQHLPFDINQMTRSGG 179
           QN EFSIQNEDFPALPG+KGG++D+++D+HQKEQLH+N +  MQSQH       M RS G
Sbjct: 312 QNQEFSIQNEDFPALPGFKGGNADYAMDIHQKEQLHDNAVPMMQSQHF-----SMGRSAG 366

Query: 180 FSLGGTFQSNLQQQQLH 230
           FSLGGT+ S+  QQQ H
Sbjct: 367 FSLGGTYSSHRAQQQQH 383


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