BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00020651
         (1729 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578285.1| PREDICTED: transcription factor BIM1-like [B...   251   9e-64
ref|XP_002460394.1| hypothetical protein SORBIDRAFT_02g027460 [S...   240   2e-60
gb|ADQ38902.1| bHLH transcription factor [Musa acuminata AAA Group]   233   1e-58
ref|XP_004973763.1| PREDICTED: transcription factor BIM1-like [S...   232   3e-58
ref|XP_006660238.1| PREDICTED: transcription factor BIM1-like [O...   227   1e-56
gb|ACG28929.1| transcription factor BIM2 [Zea mays]                   227   1e-56
ref|XP_004957107.1| PREDICTED: transcription factor BIM2-like is...   226   2e-56
tpg|DAA61920.1| TPA: putative HLH DNA-binding domain superfamily...   226   2e-56
gb|ACL52596.1| unknown [Zea mays] gi|414885905|tpg|DAA61919.1| T...   226   3e-56
ref|XP_004957106.1| PREDICTED: transcription factor BIM2-like is...   225   4e-56
gb|EOY22174.1| Transcription factor BIM1, putative isoform 2 [Th...   220   2e-54
dbj|BAJ84943.1| predicted protein [Hordeum vulgare subsp. vulgare]    219   2e-54
gb|ACN34591.1| unknown [Zea mays] gi|414885909|tpg|DAA61923.1| T...   219   3e-54
ref|XP_004957105.1| PREDICTED: transcription factor BIM2-like is...   218   5e-54
ref|XP_002273274.2| PREDICTED: transcription factor BIM1-like [V...   216   2e-53
ref|XP_002445973.1| hypothetical protein SORBIDRAFT_07g028860 [S...   216   3e-53
gb|EOY22175.1| Transcription factor BIM1, putative isoform 3 [Th...   215   4e-53
ref|NP_001062109.1| Os08g0490000 [Oryza sativa Japonica Group] g...   214   9e-53
gb|EEE68905.1| hypothetical protein OsJ_27750 [Oryza sativa Japo...   214   9e-53
tpg|DAA40331.1| TPA: putative HLH DNA-binding domain superfamily...   213   2e-52

>ref|XP_003578285.1| PREDICTED: transcription factor BIM1-like [Brachypodium distachyon]
          Length = 477

 Score =  251 bits (640), Expect = 9e-64
 Identities = 190/518 (36%), Positives = 257/518 (49%), Gaps = 36/518 (6%)
 Frame = +1

Query: 151  MELEEKKVTHDFLSLYAA----ESSFEPEDPRSASQGFYLKTRDFLQPLDDGREQGGG-- 312
            M ++  K THDFLSLYAA    +SS     P +ASQGF+LKT DFLQPL+       G  
Sbjct: 1    MGIQGNKATHDFLSLYAAAAAKDSSLHDSKPPAASQGFFLKTHDFLQPLEKPAPAASGVG 60

Query: 313  --RSGEMAAEKAVTGGVVLSCTGHSGDARVRTGDAQQPDTTPVRVAMPIGLEAKPEPDXX 486
              +  +   + A+ GG+        G   +          +PV  A P+ +  KPEP   
Sbjct: 61   RQQQPQQQTKHALPGGI--------GTFSI----------SPVPGARPVVV--KPEP--- 97

Query: 487  XXXXXXXXXXXXXVPYGVWDDKT-----AVCREQWPSPIIDAAH-GNXXXXXXXXXXXXX 648
                          P  +W   T     A    QW  P   A   G              
Sbjct: 98   --------------PLVLWGQPTTTHPTAQGHNQWTLPFAGAGRVGPAPRQNRKGRGGAA 143

Query: 649  XQRRLTPEMKGTYKEVDNDEVLGKRKCSSSHTDMTIKVHGRGSSLN----EPRPNTPRSK 816
                 +    G   + D+  +  +R+ SSS  ++ ++V G+G S +    + RPNTP+SK
Sbjct: 144  FMDSGSRSSGGAGLDDDDGGLAARREVSSSLQELAVRVDGKGGSCSGSGTDQRPNTPKSK 203

Query: 817  HSATEQRRRTKINDRFQIMRQIIPHSDQKRDKASFLMEVIEYIRFLQEKVQRYEAPSSTW 996
            HSATEQRRR+KINDRFQI+R ++PH+DQKRDKA+FL+EVIEYIRFLQEK Q+YEA    W
Sbjct: 204  HSATEQRRRSKINDRFQILRDLLPHTDQKRDKATFLLEVIEYIRFLQEKAQKYEASFPEW 263

Query: 997  NQDAAKLMPWKSSQPTSNGLS------IPDEVIKTDPDPPHLFSTNCIDGIVPVTIPPSA 1158
            NQ+ AKL+PW +    S+  S      IP++ +   PDP   F TN       +T     
Sbjct: 264  NQENAKLLPWSNIYFRSSWKSAQSKGQIPEDAL---PDPSQ-FVTNGSSPGFNITGKLDD 319

Query: 1159 KQSSATTGIIAG------------ISHKTELAPTCPSNLAFTQNWLQPRWFNVPKENCIA 1302
              ++  +G +AG            +S ++   P   +N   +Q   QP+W         A
Sbjct: 320  NHTTVASGAVAGTPDLAENDHMASVSCRSAETPINITNNVTSQ--YQPQW---------A 368

Query: 1303 QPQRKLILNQDSMQDRPLITSSRLTDKMDKERFRLQEQLIIDDGTISISNTYSHGLLNTL 1482
             P         S  D   + SS L D          +QL ID+GTIS+S+ YS  LLNTL
Sbjct: 369  GP---------SGVDDCAVNSSMLND----------QQLTIDEGTISVSSQYSQELLNTL 409

Query: 1483 AQALQSSGVDLSHAGISVQINLGKRALNRTTATSATST 1596
              ALQSSG+DLS A ISVQINLGKRA+ R+ A  ++S+
Sbjct: 410  THALQSSGIDLSQANISVQINLGKRAVKRSVAGQSSSS 447


>ref|XP_002460394.1| hypothetical protein SORBIDRAFT_02g027460 [Sorghum bicolor]
            gi|241923771|gb|EER96915.1| hypothetical protein
            SORBIDRAFT_02g027460 [Sorghum bicolor]
          Length = 507

 Score =  240 bits (612), Expect = 2e-60
 Identities = 192/543 (35%), Positives = 249/543 (45%), Gaps = 56/543 (10%)
 Frame = +1

Query: 124  GIYGNMLESMELEEKKVTHDFLSLYAAESSFEPED----------PRSASQG-FYLKTRD 270
            GI GN   + E       HDFLSLYAA ++ +             P  ASQG F LKT D
Sbjct: 2    GIQGNKAGTHE-------HDFLSLYAAAAAAKDAPLLLHHDSKAPPPPASQGNFLLKTHD 54

Query: 271  FLQPLDDGREQGGGRSGEMAAEKAVTGGVVLSCTGHSGDARVRTGDAQQP---------- 420
            FLQPLD    Q  G   E +   A            + ++R R    QQ           
Sbjct: 55   FLQPLD----QKPGAPPEPSPLPASA----------AAESRHRQQQQQQVVHALPLPGGV 100

Query: 421  -----DTTPVRVAMPIGLEAKPEPDXXXXXXXXXXXXXXXVPYGVWDDKTAVCR------ 567
                    PV VA+P     K EP                 P+ +W    A  +      
Sbjct: 101  GTFSISPAPVSVALPAPAVVKSEP-----------------PFVLWGQPAATLQPGARGH 143

Query: 568  --EQWPSPIIDAAHGNXXXXXXXXXXXXXXQRRLTPEMKGTYKEV--------------- 696
              +QW  P   A                  Q +  P+ KG                    
Sbjct: 144  QQQQWALPFAGAGQ---------VRPPPPQQHQAPPDRKGRGGGGGGVMESGSRSSGGAG 194

Query: 697  --DNDEVLGKRKCSSSHTDMTIKVHGRGSSLNE----PRPNTPRSKHSATEQRRRTKIND 858
              D+D +  +R+ SSS  D+T++V  +G S ++     RPNTPRSKHSATEQRRR+KIND
Sbjct: 195  FDDDDALTTRREVSSSLQDLTVRVDRKGGSCSDGGTDQRPNTPRSKHSATEQRRRSKIND 254

Query: 859  RFQIMRQIIPHSDQKRDKASFLMEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPWKSSQ 1038
            RFQI+R+++PH+DQKRDKA+FL+EVIEYIRFLQEKVQ+YEA    WNQ+ AK++PW   Q
Sbjct: 255  RFQILRELLPHNDQKRDKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSKGQ 314

Query: 1039 PTSNGLSIPDEVIKTDPDPPHLFSTNCIDGIVPVT-IPPSAKQSSATTGIIAGISHKTEL 1215
               +    P   ++    P   F+    D    VT    S  Q  A T  +A   +++  
Sbjct: 315  IPGDSPPDPSHFMRNGSSPGSNFTGKIDDNHNIVTSAAASGAQDQAETDHMASGCYRSAE 374

Query: 1216 APTCPSNLAFTQNWLQPRWFNVPKENCIAQPQRKLILNQDSMQDRPLITSSRLTDKMDKE 1395
             P   +N A +Q+  QP+W                     S  D   + S  L +     
Sbjct: 375  TPANITNNAISQS--QPQW------------------TGPSPVDDSAVNSEMLNN----- 409

Query: 1396 RFRLQEQLIIDDGTISISNTYSHGLLNTLAQALQSSGVDLSHAGISVQINLGKRALNRTT 1575
                 +QL ID+GTIS+S+ YS  LLN+L  ALQSSGVDLS A ISVQINLGKRA+ R  
Sbjct: 410  -----QQLAIDEGTISVSSNYSQELLNSLTHALQSSGVDLSQASISVQINLGKRAVKRPV 464

Query: 1576 ATS 1584
            A S
Sbjct: 465  APS 467


>gb|ADQ38902.1| bHLH transcription factor [Musa acuminata AAA Group]
          Length = 331

 Score =  233 bits (595), Expect = 1e-58
 Identities = 147/341 (43%), Positives = 194/341 (56%), Gaps = 7/341 (2%)
 Frame = +1

Query: 673  MKGTYKEVDNDEVLGKRKCSSSHTDMTIKVHGRGSSLNEPRPNTPRSKHSATEQRRRTKI 852
            M+   +   +++ +G+ + SS   ++T+KV G+ S      P TPRSKHSATEQRRR KI
Sbjct: 1    MESASRSSGDEDEMGRAQESSRRVELTVKVDGKSSEQKPGTPTTPRSKHSATEQRRRCKI 60

Query: 853  NDRFQIMRQIIPHSDQKRDKASFLMEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPWKS 1032
            NDRFQI+R +IPHSDQKRDKASFL+EVIEYI+FLQEKVQ+YE+    WNQ+  KLMPW S
Sbjct: 61   NDRFQILRDLIPHSDQKRDKASFLLEVIEYIKFLQEKVQKYES-FPGWNQENEKLMPWSS 119

Query: 1033 SQPTSNGLSIPDEVIKTDPDPPHLFSTNCIDGIVPVTIPPSAKQSSATTGIIAGISHKTE 1212
            +Q   +G+  P  + K      HLFS   +D  +P   P S   S+A     A +S    
Sbjct: 120  NQGPGDGMVDPPNLTKNGSQSGHLFSGKFVDSSIP-GAPMSL--SNAHNVAEADMSPGAV 176

Query: 1213 LAPTCPSNLAFTQNWLQPRWFNVPKENCIAQPQRKLILNQDSMQDRPLITSSRLTDKMDK 1392
            L P   +  A      +   F  P+E  I+     +  +Q   Q    +    L+  M  
Sbjct: 177  LVPMQSNYYASVG---RGSGFMQPQERVISDSDNPVSQSQSEWQSSSCMADCNLSSGMLN 233

Query: 1393 ERFRLQEQLIIDDGTISISNTYSHGLLNTLAQALQSSGVDLSHAGISVQINLGKRALNR- 1569
            E     E+LIID+GTISIS+ YS GLL  L+QA+ SSGVDLS A ISVQINLGK A  R 
Sbjct: 234  E----HEELIIDEGTISISSVYSQGLLTALSQAMASSGVDLSQASISVQINLGKGASKRP 289

Query: 1570 TTATSATSTFKGCKRFDYSSVGNSI------EQSKAPKRSK 1674
            TTA  + +         +  +GN++      E  + PKR K
Sbjct: 290  TTANMSNAKDHSDNSHIHQIMGNTVPGSNIEESEQVPKRQK 330


>ref|XP_004973763.1| PREDICTED: transcription factor BIM1-like [Setaria italica]
          Length = 495

 Score =  232 bits (592), Expect = 3e-58
 Identities = 179/514 (34%), Positives = 242/514 (47%), Gaps = 32/514 (6%)
 Frame = +1

Query: 151  MELEEKKVTHDFLSLYAAESSF-------EPEDPRSASQGFYLKTRDFLQPLDDGREQGG 309
            M L+  K THDFLSLY+A           E + P  + QGF+LKT DFLQPL+    Q  
Sbjct: 1    MGLQGDKATHDFLSLYSAAKDSALPLLPPESKPPPPSHQGFFLKTHDFLQPLERPSSQSP 60

Query: 310  GR-SGEMAAEKAVTGGVVLSCTGHSGDARVRTGDAQQPDTTPVRVAMPIGLEAKPEPDXX 486
                   AAEK +    +    G    +R     A QP     +   P  +  +P+P   
Sbjct: 61   PPLPSRPAAEKQLRQHALPGGIGTFSISRAAAAAADQPGAAVKQEQPPFAVWGQPDP--- 117

Query: 487  XXXXXXXXXXXXXVPYGVWDDKTAVCREQWPSPIIDAAHGNXXXXXXXXXXXXXXQRRLT 666
                         +P+       A  R Q                          Q +  
Sbjct: 118  -------RGHPWSLPFAARCVAVASARPQ-----------------------PQQQPQRQ 147

Query: 667  PEMK--GTYKEV-----------DNDEVLGKRKCSSSHTDMTIKVHGRGSSLN-----EP 792
            PE K  G + +            D+D +  +R+ SSS  +++++V  +G S +     + 
Sbjct: 148  PERKAGGGFMDAGSRSSGGAGFDDDDGLAARREVSSSLKELSVRVETKGGSCSGSAGTDQ 207

Query: 793  RPNTPRSKHSATEQRRRTKINDRFQIMRQIIPHSDQKRDKASFLMEVIEYIRFLQEKVQR 972
             PNTPRSKHSATEQRRR+KINDRFQI+R+I+P +DQKRDKASFL+EVIEYIRFLQEKVQ+
Sbjct: 208  LPNTPRSKHSATEQRRRSKINDRFQILREILPQNDQKRDKASFLLEVIEYIRFLQEKVQK 267

Query: 973  YEAPSSTWNQDAAKLMPW------KSSQPTSNGLSIPDEVIKTDPDPPHLFSTNCIDGIV 1134
            YE     WNQ+ AK+MPW       S + + N   I  +++ +DP      + N      
Sbjct: 268  YEVSHPEWNQENAKIMPWSNIYFRSSWKNSQNKDEINGDMVSSDPTQ---VTKNGSSPRF 324

Query: 1135 PVTIPPSAKQSSATTGIIAGISHKTELAPTCPSNLAFTQNWLQPRWFNVPKENCIAQPQR 1314
            P         ++       G     EL    P   A T N       NV   N +A  Q+
Sbjct: 325  PFAAKTEDHNNAGAFETAPGAQELAELKGCVPFKQAETPN-------NV--TNTVASQQQ 375

Query: 1315 KLILNQDSMQDRPLITSSRLTDKMDKERFRLQEQLIIDDGTISISNTYSHGLLNTLAQAL 1494
              + N  S  D   + +  L +           +L ID+GTIS+S+ YS GLL TL  AL
Sbjct: 376  AQLTN-SSPSDDSAVPNGMLNN----------PELAIDEGTISLSSQYSQGLLTTLNLAL 424

Query: 1495 QSSGVDLSHAGISVQINLGKRALNRTTATSATST 1596
            Q+SGVDLS A ISVQINLGKRA  R+   S +++
Sbjct: 425  QNSGVDLSQASISVQINLGKRATKRSAPVSNSTS 458


>ref|XP_006660238.1| PREDICTED: transcription factor BIM1-like [Oryza brachyantha]
          Length = 563

 Score =  227 bits (579), Expect = 1e-56
 Identities = 183/549 (33%), Positives = 256/549 (46%), Gaps = 44/549 (8%)
 Frame = +1

Query: 169  KVTHDFLSLYAAE--------------SSFEPEDPRSASQGFYLKTRDFLQPLDDGREQG 306
            K T+DFLSLYAA               S  +P  P   +QGF+LKT DFL  +++  +Q 
Sbjct: 71   KATNDFLSLYAAPAATATGYSPPLPRLSDSKPPAPAPPAQGFFLKTHDFLPKVENRADQS 130

Query: 307  GGRSGEMAAEKAV----TGGVVLSCTGHSGDARVRTGDAQQPD----TTPVRVAMPIGLE 462
                    AEK +      G+      H+  A       Q+P     + PV    P G +
Sbjct: 131  PPAHAAATAEKQLRHQHASGIAAFTISHAHAAAATAAVKQEPPLAPRSQPVLFIHPAGHQ 190

Query: 463  AKPEPDXXXXXXXXXXXXXXXVPYGVWDDKTAVCREQWPSPIIDAAHGNXXXXXXXXXXX 642
                                 +P+       A  R+Q   P  +   G            
Sbjct: 191  -------------------WSLPFPARAVAVASSRQQQQQPPPERKCGGGLMDAGS---- 227

Query: 643  XXXQRRLTPEMKGTYKEVDNDEVLGKRKCSSSHTDMTIKVHGRGSSLN-----EPRPNTP 807
                        G     D+D +  +R+ SSS  ++ ++V G+G S +     +  PNTP
Sbjct: 228  ---------RSSGGAGFDDDDGLAARREVSSSLKELAVRVEGKGGSCSGSAGTDQLPNTP 278

Query: 808  RSKHSATEQRRRTKINDRFQIMRQIIPHSDQKRDKASFLMEVIEYIRFLQEKVQRYEAPS 987
            RSKHSATEQRRR+KINDRFQ++R+++PH+DQKRDKASFL+EVIEYIRFLQEKVQ+YE   
Sbjct: 279  RSKHSATEQRRRSKINDRFQLLRELLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSY 338

Query: 988  STWNQDAAKLMPW------KSSQPTSNGLSIPDEVIKTDPDPP-HLFSTNCIDGIVPVTI 1146
              WNQ+ AK++PW       S +   N   IP +   T P+PP HL   N    I P T 
Sbjct: 339  PEWNQENAKIVPWTNIYFRSSWKNAQNKSQIPAD---TSPEPPEHL--KNGSSYIFPFT- 392

Query: 1147 PPSAKQSSATTGIIAGISHKTELAPTCPSNLAFTQNWLQPRWFNVPKENCIAQPQRKLIL 1326
              S   ++  T   +G   + E  P          + +  R  + P  N +A+     + 
Sbjct: 393  GNSDNNNAVQTAAASGAQDQAETDP---------MSRMPYRSADTPSPNNVAEK----VT 439

Query: 1327 NQDSMQDRPLITSSRLTDKMDKERFRLQEQLIIDDGTISISNTYSHGLLNTLAQALQSSG 1506
            +Q  +Q   L+  S   + +          L ID+GTIS+S+ YS  LLN L  AL++SG
Sbjct: 440  SQSQVQ---LVRPSPAENNVGNGNMLNNSGLAIDEGTISLSSQYSQELLNKLNHALENSG 496

Query: 1507 VDLSHAGISVQINLGKRALN-RTTATSATSTFKGCKRFDYSSVGNSIE---------QSK 1656
            +DLS A ISVQINLGKRA     T+TS   T   C   +  ++G+ +          Q +
Sbjct: 497  IDLSQASISVQINLGKRASTPAATSTSKEHTDPAC---NSQAMGHQLRLGDGAEEHLQLQ 553

Query: 1657 APKRSKLEN 1683
            A KR K +N
Sbjct: 554  ASKRHKSDN 562


>gb|ACG28929.1| transcription factor BIM2 [Zea mays]
          Length = 514

 Score =  227 bits (579), Expect = 1e-56
 Identities = 185/560 (33%), Positives = 250/560 (44%), Gaps = 48/560 (8%)
 Frame = +1

Query: 124  GIYGNMLESMELEEKKVTHDFLSLYAAESS-------FEPEDPRSASQGFYLKTRDFLQP 282
            GI GN   + E       HDFLSLYAA ++        + + P  +   F LKT DFLQP
Sbjct: 2    GIQGNKAATHE-------HDFLSLYAAAAAKDALLLLHDSKAPPPSQGNFLLKTHDFLQP 54

Query: 283  LDD--GREQGGGRSGEMAAEK--------AVTGGVVLSCTGHSGDARVRTGDAQQPDTTP 432
            LD   G           AAE          V     L   G  G   +           P
Sbjct: 55   LDQKPGAPPEPSPLPASAAESRHQPQQQVVVANQHALPLPGGVGTFSI--------SPAP 106

Query: 433  VRVAMPIGLEAKPEPDXXXXXXXXXXXXXXXVPYGVWDDKTAVC-------REQWPSPII 591
            V VA+P  +  K EP                 P+ +W    A         ++QW  P  
Sbjct: 107  VSVALPAAV-VKSEP-----------------PFVLWGQPAATLHPGARGHQQQWALPFP 148

Query: 592  DAAH-----GNXXXXXXXXXXXXXXQRRLTPEMKGTYKEVDNDEVLGKRKCSSSHTDMTI 756
             A                                G     D+D +  +R+ SSS  D+T+
Sbjct: 149  GAGQVRLPPQQAPPDRKGRGGAGGGVMESGSRSSGAAGFDDDDGLTTRREVSSSLQDLTV 208

Query: 757  KVHGRGSSLNE----PRPNTPRSKHSATEQRRRTKINDRFQIMRQIIPHSDQKRDKASFL 924
            +V  +G S ++     RPNTPRSKHSATEQRRR+KINDRFQI+R+++PHSDQKRDKA+FL
Sbjct: 209  RVDRKGGSCSDGGTDQRPNTPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFL 268

Query: 925  MEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPWKSSQPTS---NGLSIPDEVIKTDPDP 1095
            +EVIEYIRFLQEKVQ+YEA    WNQ+ AK++PW +    S   N  S       + PDP
Sbjct: 269  LEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISGDSPPDP 328

Query: 1096 PHLFSTNCIDG------------IVPVTIPPSAKQSSATTGIIAGISHKTELAPTCPSNL 1239
             H        G            IV       A+  + T  + +G     E      +N 
Sbjct: 329  SHFMRNGSSPGSNFTGKLDDNHNIVTSAAASGAQDQAETDHMASGCYRSAETTANFTNN- 387

Query: 1240 AFTQNWLQPRWFNVPKENCIAQPQRKLILNQDSMQDRPLITSSRLTDKMDKERFRLQEQL 1419
            A +Q+  QP+W           P     +N +++ +                     +QL
Sbjct: 388  AMSQS--QPQWTG-------PSPVDDSAMNSETLNN---------------------QQL 417

Query: 1420 IIDDGTISISNTYSHGLLNTLAQALQSSGVDLSHAGISVQINLGKRALNRTTATSATSTF 1599
            +ID+GTI +S+ YS  LLN+L  ALQSSGVDLS A ISVQIN+GKRA  R  A  ++++ 
Sbjct: 418  VIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGKRAAKRPAAGVSSNSK 477

Query: 1600 KGCKRFDYSSVGNSIEQSKA 1659
            +       + +G+ +  S A
Sbjct: 478  EPADPASSNELGHQLTLSGA 497


>ref|XP_004957107.1| PREDICTED: transcription factor BIM2-like isoform X3 [Setaria
            italica]
          Length = 497

 Score =  226 bits (577), Expect = 2e-56
 Identities = 179/513 (34%), Positives = 243/513 (47%), Gaps = 28/513 (5%)
 Frame = +1

Query: 124  GIYGNMLESMELEEKKVTHDFLSLYAA----ESSFEPEDPRSA--SQG-FYLKTRDFLQP 282
            GI GN   + E       HDFLSLY A    +S  +  D +S   SQG F+LKT DFLQP
Sbjct: 2    GIQGNKAATHE-------HDFLSLYTAAAAKDSPLQLHDSKSPPPSQGNFFLKTHDFLQP 54

Query: 283  LDDGREQGGGRSGEMAAEKAVTGG--VVLSCTGHSGDARVRTGDAQQPDTTPVRVAMPIG 456
            L+         S  + A  A +      ++   H+    V  G        PV  A P  
Sbjct: 55   LEKPEAPPPEPSPTLPASGADSRHHHQPVAAKQHALPLPVGVGTFTICPA-PVSAARPPA 113

Query: 457  LEAKPEPDXXXXXXXXXXXXXXXVPYGVWDDKTAVC-------REQWPSPIIDAAHGNXX 615
               K EP                 P+ +W    A         ++QW  P   A  G   
Sbjct: 114  AVVKAEP-----------------PFVLWGQPAAFHPGARGHQQQQWALPFAGAGQGRPP 156

Query: 616  XXXXXXXXXXXXQRRLTPEMKGTYKEV------DNDEVLGKRKCSSSHTDMTIKVHGRGS 777
                        +      M+   +        D+D +  +R+ SSS   + +++  +G 
Sbjct: 157  PPQQAQPPDRKGRGGGGGAMESGSRSSGGAGFDDDDGLAARREVSSS---LKVRMDRKGG 213

Query: 778  SLNE----PRPNTPRSKHSATEQRRRTKINDRFQIMRQIIPHSDQKRDKASFLMEVIEYI 945
            S ++     RPNTPRSKHSATEQRRR+KINDRFQI+R+++PHSDQKRDKA+FL+EVIEYI
Sbjct: 214  SCSDGGTDQRPNTPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYI 273

Query: 946  RFLQEKVQRYEAPSSTWNQDAAKLMPWKSSQPTSNGLSIPDEVIKTDPDPPHLFSTNCID 1125
            RFLQEKV +YEA    WNQ+ AK++PW   Q     L  P   ++    P   F+    D
Sbjct: 274  RFLQEKVTKYEATFPEWNQENAKMLPWSKGQIPGESLPDPSHFMRNGSSPGSNFTGKLDD 333

Query: 1126 GIVPVT-IPPSAKQSSATTGIIAGISHKTELAPTCPSNLAFTQNWLQPRWFN-VPKENCI 1299
                VT    S  Q    T  +A +  ++   P   +N   +Q+  QP+W    P ++C 
Sbjct: 334  NHNMVTSAAASGAQDQTETDPMASMCFRSAETPANITNNTLSQS--QPQWTGPSPVDDC- 390

Query: 1300 AQPQRKLILNQDSMQDRPLITSSRLTDKMDKERFRLQEQLIIDDGTISISNTYSHGLLNT 1479
                    +N + + ++P                     L I++GTIS+S+ YS  LLN+
Sbjct: 391  -------AVNSEMLNNQP---------------------LAINEGTISVSSQYSQELLNS 422

Query: 1480 LAQALQSSGVDLSHAGISVQINLGKRALNRTTA 1578
            L  ALQSSGVDLS A ISVQINLGKRA+ R  A
Sbjct: 423  LTHALQSSGVDLSQASISVQINLGKRAVKRPAA 455


>tpg|DAA61920.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 514

 Score =  226 bits (576), Expect = 2e-56
 Identities = 189/572 (33%), Positives = 253/572 (44%), Gaps = 60/572 (10%)
 Frame = +1

Query: 124  GIYGNMLESMELEEKKVTHDFLSLYAAESS-------FEPEDPRSASQGFYLKTRDFLQP 282
            GI GN   + E       HDFLSLYAA ++        + + P  +   F LKT DFLQP
Sbjct: 2    GIQGNKAATHE-------HDFLSLYAAAAAKDAPLLLHDSKAPPPSQGNFLLKTHDFLQP 54

Query: 283  LDD--GREQGGGRSGEMAAEK--------AVTGGVVLSCTGHSGDARVRTGDAQQPDTTP 432
            LD   G           AAE          V     L   G  G   +           P
Sbjct: 55   LDQKPGAPPEPSPLPASAAESRHQPQQQVVVANQHALPLPGGVGTFSI--------SPAP 106

Query: 433  VRVAMPIGLEAKPEPDXXXXXXXXXXXXXXXVPYGVWDDKTAVC-------REQWPSPII 591
            V VA+P  +  K EP                 P+ +W    A         ++QW  P  
Sbjct: 107  VSVALPAAV-VKSEP-----------------PFVLWGQPAATLHPGARGHQQQWALPFA 148

Query: 592  DAAHGNXXXXXXXXXXXXXXQRRLTPEMKGTYKEV-----------------DNDEVLGK 720
             A                   ++  P+ KG                      D+D +  +
Sbjct: 149  GAGQ------------VRLPPQQAPPDRKGRGGAGGGVMESGSRSSGGAGFDDDDGLTTR 196

Query: 721  RKCSSSHTDMTIKVHGRGSSLNE----PRPNTPRSKHSATEQRRRTKINDRFQIMRQIIP 888
            R+ SSS  D+T++V  +G S ++     RPNTPRSKHSATEQRRR+KINDRFQI+R+++P
Sbjct: 197  REVSSSLQDLTVRVDRKGGSCSDGGTDQRPNTPRSKHSATEQRRRSKINDRFQILRELLP 256

Query: 889  HSDQKRDKASFLMEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPWKSSQPTS---NGLS 1059
            HSDQKRDKA+FL+EVIEYIRFLQEKVQ+YEA    WNQ+ AK++PW +    S   N  S
Sbjct: 257  HSDQKRDKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQS 316

Query: 1060 IPDEVIKTDPDPPHLFSTNCIDG------------IVPVTIPPSAKQSSATTGIIAGISH 1203
                   + PDP H        G            IV       A+    T  + +G   
Sbjct: 317  KGQISGDSPPDPSHFMRNGSSPGSNFTGKLDDNHNIVTSAAASGAQDQVETDHMASGCYR 376

Query: 1204 KTELAPTCPSNLAFTQNWLQPRWFNVPKENCIAQPQRKLILNQDSMQDRPLITSSRLTDK 1383
              E      +N A +Q+  QP+W                     S  D   + S  L + 
Sbjct: 377  SAETTANFTNN-AMSQS--QPQW------------------TGPSPVDDSAVNSETLNN- 414

Query: 1384 MDKERFRLQEQLIIDDGTISISNTYSHGLLNTLAQALQSSGVDLSHAGISVQINLGKRAL 1563
                     +QL+ID+GTI +S+ YS  LLN+L  ALQSSGVDLS A ISVQIN+GKRA 
Sbjct: 415  ---------QQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGKRAA 465

Query: 1564 NRTTATSATSTFKGCKRFDYSSVGNSIEQSKA 1659
             R  A  ++++ +       + +G+ +  S A
Sbjct: 466  KRPAAGVSSNSKEPADPASSNELGHQLTLSGA 497


>gb|ACL52596.1| unknown [Zea mays] gi|414885905|tpg|DAA61919.1| TPA: putative HLH
            DNA-binding domain superfamily protein [Zea mays]
          Length = 515

 Score =  226 bits (575), Expect = 3e-56
 Identities = 189/573 (32%), Positives = 253/573 (44%), Gaps = 61/573 (10%)
 Frame = +1

Query: 124  GIYGNMLESMELEEKKVTHDFLSLYAAESS-------FEPEDPRSASQGFYLKTRDFLQP 282
            GI GN   + E       HDFLSLYAA ++        + + P  +   F LKT DFLQP
Sbjct: 2    GIQGNKAATHE-------HDFLSLYAAAAAKDAPLLLHDSKAPPPSQGNFLLKTHDFLQP 54

Query: 283  LDD--GREQGGGRSGEMAAEK--------AVTGGVVLSCTGHSGDARVRTGDAQQPDTTP 432
            LD   G           AAE          V     L   G  G   +           P
Sbjct: 55   LDQKPGAPPEPSPLPASAAESRHQPQQQVVVANQHALPLPGGVGTFSI--------SPAP 106

Query: 433  VRVAMPIGLEAKPEPDXXXXXXXXXXXXXXXVPYGVWDDKTAVC--------REQWPSPI 588
            V VA+P  +  K EP                 P+ +W    A          ++QW  P 
Sbjct: 107  VSVALPAAV-VKSEP-----------------PFVLWGQPAATLHPGARAGHQQQWALPF 148

Query: 589  IDAAHGNXXXXXXXXXXXXXXQRRLTPEMKGTYKEV-----------------DNDEVLG 717
              A                   ++  P+ KG                      D+D +  
Sbjct: 149  AGAGQ------------VRLPPQQAPPDRKGRGGAGGGVMESGSRSSGGAGFDDDDGLTT 196

Query: 718  KRKCSSSHTDMTIKVHGRGSSLNE----PRPNTPRSKHSATEQRRRTKINDRFQIMRQII 885
            +R+ SSS  D+T++V  +G S ++     RPNTPRSKHSATEQRRR+KINDRFQI+R+++
Sbjct: 197  RREVSSSLQDLTVRVDRKGGSCSDGGTDQRPNTPRSKHSATEQRRRSKINDRFQILRELL 256

Query: 886  PHSDQKRDKASFLMEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPWKSSQPTS---NGL 1056
            PHSDQKRDKA+FL+EVIEYIRFLQEKVQ+YEA    WNQ+ AK++PW +    S   N  
Sbjct: 257  PHSDQKRDKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQ 316

Query: 1057 SIPDEVIKTDPDPPHLFSTNCIDG------------IVPVTIPPSAKQSSATTGIIAGIS 1200
            S       + PDP H        G            IV       A+    T  + +G  
Sbjct: 317  SKGQISGDSPPDPSHFMRNGSSPGSNFTGKLDDNHNIVTSAAASGAQDQVETDHMASGCY 376

Query: 1201 HKTELAPTCPSNLAFTQNWLQPRWFNVPKENCIAQPQRKLILNQDSMQDRPLITSSRLTD 1380
               E      +N A +Q+  QP+W                     S  D   + S  L +
Sbjct: 377  RSAETTANFTNN-AMSQS--QPQW------------------TGPSPVDDSAVNSETLNN 415

Query: 1381 KMDKERFRLQEQLIIDDGTISISNTYSHGLLNTLAQALQSSGVDLSHAGISVQINLGKRA 1560
                      +QL+ID+GTI +S+ YS  LLN+L  ALQSSGVDLS A ISVQIN+GKRA
Sbjct: 416  ----------QQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGKRA 465

Query: 1561 LNRTTATSATSTFKGCKRFDYSSVGNSIEQSKA 1659
              R  A  ++++ +       + +G+ +  S A
Sbjct: 466  AKRPAAGVSSNSKEPADPASSNELGHQLTLSGA 498


>ref|XP_004957106.1| PREDICTED: transcription factor BIM2-like isoform X2 [Setaria
            italica]
          Length = 513

 Score =  225 bits (574), Expect = 4e-56
 Identities = 182/530 (34%), Positives = 248/530 (46%), Gaps = 45/530 (8%)
 Frame = +1

Query: 124  GIYGNMLESMELEEKKVTHDFLSLYAA----ESSFEPEDPRSA--SQG-FYLKTRDFLQP 282
            GI GN   + E       HDFLSLY A    +S  +  D +S   SQG F+LKT DFLQP
Sbjct: 2    GIQGNKAATHE-------HDFLSLYTAAAAKDSPLQLHDSKSPPPSQGNFFLKTHDFLQP 54

Query: 283  LDDGREQGGGRSGEMAAEKAVTGG--VVLSCTGHSGDARVRTGDAQQPDTTPVRVAMPIG 456
            L+         S  + A  A +      ++   H+    V  G        PV  A P  
Sbjct: 55   LEKPEAPPPEPSPTLPASGADSRHHHQPVAAKQHALPLPVGVGTFTICPA-PVSAARPPA 113

Query: 457  LEAKPEPDXXXXXXXXXXXXXXXVPYGVWDDKTAVC-------REQWPSPIIDAAHGNXX 615
               K EP                 P+ +W    A         ++QW  P   A  G   
Sbjct: 114  AVVKAEP-----------------PFVLWGQPAAFHPGARGHQQQQWALPFAGAGQGRPP 156

Query: 616  XXXXXXXXXXXXQRRLTPEMKGTYKEV------DNDEVLGKRKCSSSHTDMTIKVHGRGS 777
                        +      M+   +        D+D +  +R+ SSS  ++T+++  +G 
Sbjct: 157  PPQQAQPPDRKGRGGGGGAMESGSRSSGGAGFDDDDGLAARREVSSSLKELTVRMDRKGG 216

Query: 778  SLNE----PRPNTPRSKHSATEQRRRTKINDRFQIMRQIIPHSDQKRDKASFLMEVIEYI 945
            S ++     RPNTPRSKHSATEQRRR+KINDRFQI+R+++PHSDQKRDKA+FL+EVIEYI
Sbjct: 217  SCSDGGTDQRPNTPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYI 276

Query: 946  RFLQEKVQRYEAPSSTWNQDAAKLMPWKS-------SQPTSNGLSIPDEVIKTDPDPPHL 1104
            RFLQEKV +YEA    WNQ+ AK++PW +           S G  IP E +   PDP H 
Sbjct: 277  RFLQEKVTKYEATFPEWNQENAKMLPWSNMYFRSFWKNEQSKG-QIPGESL---PDPSHF 332

Query: 1105 FSTNCIDGI-----------VPVTIPPSAKQSSATTGIIAGISHKTELAPTCPSNLAFTQ 1251
                   G            +  +   S  Q    T  +A +  ++   P   +N   +Q
Sbjct: 333  MRNGSSPGSNFTGKLDDNHNMVTSAAASGAQDQTETDPMASMCFRSAETPANITNNTLSQ 392

Query: 1252 NWLQPRWFN-VPKENCIAQPQRKLILNQDSMQDRPLITSSRLTDKMDKERFRLQEQLIID 1428
            +  QP+W    P ++C         +N + + ++P                     L I+
Sbjct: 393  S--QPQWTGPSPVDDC--------AVNSEMLNNQP---------------------LAIN 421

Query: 1429 DGTISISNTYSHGLLNTLAQALQSSGVDLSHAGISVQINLGKRALNRTTA 1578
            +GTIS+S+ YS  LLN+L  ALQSSGVDLS A ISVQINLGKRA+ R  A
Sbjct: 422  EGTISVSSQYSQELLNSLTHALQSSGVDLSQASISVQINLGKRAVKRPAA 471


>gb|EOY22174.1| Transcription factor BIM1, putative isoform 2 [Theobroma cacao]
          Length = 564

 Score =  220 bits (560), Expect = 2e-54
 Identities = 141/321 (43%), Positives = 192/321 (59%), Gaps = 21/321 (6%)
 Frame = +1

Query: 691  EVDNDEVLGKRKCSSSHTDMTIKVHGRGSSLNEPRPNTPRSKHSATEQRRRTKINDRFQI 870
            E D D VL K   +++H+   ++V   G S  + + NTPRSKHSATEQRRR+KINDRFQ+
Sbjct: 225  EEDEDFVLKKESSTTTHSKGELRVKVDGKSAPDQKANTPRSKHSATEQRRRSKINDRFQM 284

Query: 871  MRQIIPHSDQKRDKASFLMEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPWKSSQPTSN 1050
            +R +IPHSDQKRDKASFL+EVIEYI+FLQEKV +YE     W+ + +KLMPW+++   + 
Sbjct: 285  LRDLIPHSDQKRDKASFLLEVIEYIQFLQEKVHKYEGTYQGWSHEPSKLMPWRNNHRPTE 344

Query: 1051 GLSIPDEVIKTDPDPPHLFSTNCIDGIVPV--TIPPSA------KQSSATT----GIIAG 1194
              +   + I     P  +FS    +  + V  TIP SA        S+ATT     +  G
Sbjct: 345  NYADQSQAINGVSAPALVFSAKFDEKNITVAPTIPGSAHNPIESDMSTATTFRAIDLSPG 404

Query: 1195 ISHKTELAPTC--PSNLAFTQN-----WLQPRWFNVPKE--NCIAQPQRKLILNQDSMQD 1347
            + +KT   P    P+  A  Q+      L PR   +P +  NC +QPQ  +  +  S   
Sbjct: 405  MMNKTMPFPVSLQPNFFASAQSTGAAAQLVPR---LPSDVANCASQPQ-SIACHSGSFTT 460

Query: 1348 RPLITSSRLTDKMDKERFRLQEQLIIDDGTISISNTYSHGLLNTLAQALQSSGVDLSHAG 1527
               + S +L           +++L I+ GTISIS+ YS GLLNTL QALQ+SGVDLSHA 
Sbjct: 461  DGALPSEKLK----------EQELTIEGGTISISSVYSQGLLNTLTQALQTSGVDLSHAS 510

Query: 1528 ISVQINLGKRALNRTTATSAT 1590
            ISVQI LGKR+ +R TA+++T
Sbjct: 511  ISVQIELGKRSSSRPTASAST 531


>dbj|BAJ84943.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 605

 Score =  219 bits (559), Expect = 2e-54
 Identities = 171/490 (34%), Positives = 226/490 (46%), Gaps = 39/490 (7%)
 Frame = +1

Query: 241  SQGFYLKTRDFLQPLDD---GREQGGGRSGEMAAEKAVTGGVVLSCTGHSGDARVRTGDA 411
            +QGF+LKT DFLQPL+        G  R  +   +   T   +    G    ++   G A
Sbjct: 130  AQGFFLKTHDFLQPLEKPAASAPSGADRQQQQQQQATTTKHALPGGIGTFSVSQQAPGAA 189

Query: 412  -QQPDTTPVRVAMPIGLEAKPEPDXXXXXXXXXXXXXXXVPYGVWDDKTAVC-------- 564
              QP      V +      KPEP                 P+ +W   TA          
Sbjct: 190  GPQPSAAAAAVVV-----VKPEPP----------------PFVLWGQPTASQPPRAQVAG 228

Query: 565  --REQWPSPII---DAAHGNXXXXXXXXXXXXXXQRRLTPEMKGTYKEVDNDEVLGKRKC 729
                QW  P      AA  +                       G     D+D +  +R+ 
Sbjct: 229  HNHHQWSLPFAGAGQAATASRKHPVERKRRGGGGFMDSGSRSSGGAGFDDDDGLAARREV 288

Query: 730  SSSHTDMTIKVHGRGSSLN----EPRPNTPRSKHSATEQRRRTKINDRFQIMRQIIPHSD 897
            SSS  ++ ++V  +G S +    +  PNTP+SKHSATEQRRR+KINDRFQI+R ++PH+D
Sbjct: 289  SSSLQELAVRVDAKGGSCSGSGTDQLPNTPKSKHSATEQRRRSKINDRFQILRDLLPHTD 348

Query: 898  QKRDKASFLMEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPWKS-------SQPTSNGL 1056
            QKRDKA+FL+EVIEYIRFLQEK Q+YEA    WNQ+ AKL+PW +           S G 
Sbjct: 349  QKRDKATFLLEVIEYIRFLQEKAQKYEASFPEWNQENAKLLPWSNMYFRSSWKNAQSKG- 407

Query: 1057 SIPDEVIKTDPDPPHLFSTNCIDGI-----------VPVTIPPSAKQSSATTGIIAGISH 1203
             IP++     PDP          G               +   S  Q  A T  +A +S 
Sbjct: 408  QIPED---ASPDPSQFIRNGASPGFNITGKLDDNHTAVASAAISGAQDQAETDHMASVSC 464

Query: 1204 KTELAPTCPSNLAFTQNWLQPRWFNVPKENCIAQPQRKLILNQDSMQDRPLITSSRLTDK 1383
            ++   PT   N    Q+  QP+W         A P         S  D   + S  L + 
Sbjct: 465  RSADTPTNILNNVSPQS--QPQW---------ADP---------SGVDDCAVNSDVLNN- 503

Query: 1384 MDKERFRLQEQLIIDDGTISISNTYSHGLLNTLAQALQSSGVDLSHAGISVQINLGKRAL 1563
                     +QL+ID+GTIS+S+ YS  LLNTL  ALQSSG+DLS A ISVQINLGKRA+
Sbjct: 504  ---------QQLMIDEGTISVSSQYSQELLNTLTHALQSSGIDLSQANISVQINLGKRAV 554

Query: 1564 NRTTATSATS 1593
             R TA  ++S
Sbjct: 555  KRPTAGQSSS 564


>gb|ACN34591.1| unknown [Zea mays] gi|414885909|tpg|DAA61923.1| TPA: putative HLH
            DNA-binding domain superfamily protein [Zea mays]
          Length = 327

 Score =  219 bits (558), Expect = 3e-54
 Identities = 134/327 (40%), Positives = 185/327 (56%), Gaps = 6/327 (1%)
 Frame = +1

Query: 697  DNDEVLGKRKCSSSHTDMTIKVHGRGSSLNE----PRPNTPRSKHSATEQRRRTKINDRF 864
            D+D +  +R+ SSS  D+T++V  +G S ++     RPNTPRSKHSATEQRRR+KINDRF
Sbjct: 15   DDDGLTTRREVSSSLQDLTVRVDRKGGSCSDGGTDQRPNTPRSKHSATEQRRRSKINDRF 74

Query: 865  QIMRQIIPHSDQKRDKASFLMEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPWKSSQPT 1044
            QI+R+++PHSDQKRDKA+FL+EVIEYIRFLQEKVQ+YEA    WNQ+ AK++PW   Q +
Sbjct: 75   QILRELLPHSDQKRDKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSKGQIS 134

Query: 1045 SNGLSIPDEVIKTDPDPPHLFSTNCID--GIVPVTIPPSAKQSSATTGIIAGISHKTELA 1218
             +    P   ++    P   F+    D   IV       A+    T  + +G     E  
Sbjct: 135  GDSPPDPSHFMRNGSSPGSNFTGKLDDNHNIVTSAAASGAQDQVETDHMASGCYRSAETT 194

Query: 1219 PTCPSNLAFTQNWLQPRWFNVPKENCIAQPQRKLILNQDSMQDRPLITSSRLTDKMDKER 1398
                +N A +Q+  QP+W                     S  D   + S  L +      
Sbjct: 195  ANFTNN-AMSQS--QPQW------------------TGPSPVDDSAVNSETLNN------ 227

Query: 1399 FRLQEQLIIDDGTISISNTYSHGLLNTLAQALQSSGVDLSHAGISVQINLGKRALNRTTA 1578
                +QL+ID+GTI +S+ YS  LLN+L  ALQSSGVDLS A ISVQIN+GKRA  R  A
Sbjct: 228  ----QQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGKRAAKRPAA 283

Query: 1579 TSATSTFKGCKRFDYSSVGNSIEQSKA 1659
              ++++ +       + +G+ +  S A
Sbjct: 284  GVSSNSKEPADPASSNELGHQLTLSGA 310


>ref|XP_004957105.1| PREDICTED: transcription factor BIM2-like isoform X1 [Setaria
            italica]
          Length = 510

 Score =  218 bits (556), Expect = 5e-54
 Identities = 181/530 (34%), Positives = 246/530 (46%), Gaps = 45/530 (8%)
 Frame = +1

Query: 124  GIYGNMLESMELEEKKVTHDFLSLYAA----ESSFEPEDPRSA--SQG-FYLKTRDFLQP 282
            GI GN   + E       HDFLSLY A    +S  +  D +S   SQG F+LKT DFLQP
Sbjct: 2    GIQGNKAATHE-------HDFLSLYTAAAAKDSPLQLHDSKSPPPSQGNFFLKTHDFLQP 54

Query: 283  LDDGREQGGGRSGEMAAEKAVTGG--VVLSCTGHSGDARVRTGDAQQPDTTPVRVAMPIG 456
            L+         S  + A  A +      ++   H+    V  G        PV  A P  
Sbjct: 55   LEKPEAPPPEPSPTLPASGADSRHHHQPVAAKQHALPLPVGVGTFTICPA-PVSAARPPA 113

Query: 457  LEAKPEPDXXXXXXXXXXXXXXXVPYGVWDDKTAVC-------REQWPSPIIDAAHGNXX 615
               K EP                 P+ +W    A         ++QW  P   A  G   
Sbjct: 114  AVVKAEP-----------------PFVLWGQPAAFHPGARGHQQQQWALPFAGAGQGRPP 156

Query: 616  XXXXXXXXXXXXQRRLTPEMKGTYKEV------DNDEVLGKRKCSSSHTDMTIKVHGRGS 777
                        +      M+   +        D+D +  +R+ SSS   + +++  +G 
Sbjct: 157  PPQQAQPPDRKGRGGGGGAMESGSRSSGGAGFDDDDGLAARREVSSS---LKVRMDRKGG 213

Query: 778  SLNE----PRPNTPRSKHSATEQRRRTKINDRFQIMRQIIPHSDQKRDKASFLMEVIEYI 945
            S ++     RPNTPRSKHSATEQRRR+KINDRFQI+R+++PHSDQKRDKA+FL+EVIEYI
Sbjct: 214  SCSDGGTDQRPNTPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYI 273

Query: 946  RFLQEKVQRYEAPSSTWNQDAAKLMPWKS-------SQPTSNGLSIPDEVIKTDPDPPHL 1104
            RFLQEKV +YEA    WNQ+ AK++PW +           S G  IP E +   PDP H 
Sbjct: 274  RFLQEKVTKYEATFPEWNQENAKMLPWSNMYFRSFWKNEQSKG-QIPGESL---PDPSHF 329

Query: 1105 FSTNCIDGI-----------VPVTIPPSAKQSSATTGIIAGISHKTELAPTCPSNLAFTQ 1251
                   G            +  +   S  Q    T  +A +  ++   P   +N   +Q
Sbjct: 330  MRNGSSPGSNFTGKLDDNHNMVTSAAASGAQDQTETDPMASMCFRSAETPANITNNTLSQ 389

Query: 1252 NWLQPRWFN-VPKENCIAQPQRKLILNQDSMQDRPLITSSRLTDKMDKERFRLQEQLIID 1428
            +  QP+W    P ++C         +N + + ++P                     L I+
Sbjct: 390  S--QPQWTGPSPVDDC--------AVNSEMLNNQP---------------------LAIN 418

Query: 1429 DGTISISNTYSHGLLNTLAQALQSSGVDLSHAGISVQINLGKRALNRTTA 1578
            +GTIS+S+ YS  LLN+L  ALQSSGVDLS A ISVQINLGKRA+ R  A
Sbjct: 419  EGTISVSSQYSQELLNSLTHALQSSGVDLSQASISVQINLGKRAVKRPAA 468


>ref|XP_002273274.2| PREDICTED: transcription factor BIM1-like [Vitis vinifera]
          Length = 565

 Score =  216 bits (550), Expect = 2e-53
 Identities = 139/322 (43%), Positives = 184/322 (57%), Gaps = 21/322 (6%)
 Frame = +1

Query: 676  KGTYKEVDNDE--VLGKRKCSSSHTDMTIKVHGRGSSLNEPRPNTPRSKHSATEQRRRTK 849
            KGT +E + DE   + K++ SS+  D+T+KV G+ S   + +  TPRSKHSATEQRRR+K
Sbjct: 217  KGTQEEEEEDEEEFVLKKESSSNKGDLTVKVDGKSS---DQKAVTPRSKHSATEQRRRSK 273

Query: 850  INDRFQIMRQIIPHSDQKRDKASFLMEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPWK 1029
            INDRFQ++R +IPHSDQKRDKASFL+EVIEYI+FLQEKV +YE     WN ++AKLMPW+
Sbjct: 274  INDRFQMLRDLIPHSDQKRDKASFLLEVIEYIQFLQEKVHKYEGSFQGWNHESAKLMPWR 333

Query: 1030 SSQPTSNGLSIPDEVIKTDPDPPHLFSTNCIDGIVPV-------TIPPSAKQSSATTGII 1188
            +S   +   +     I +   P  +FS    +  V V       T  P     SA+T   
Sbjct: 334  NSHRPAESFADQSRGINSGSGPALMFSAKFDENNVAVSPNISRNTQNPVESDLSASTTFK 393

Query: 1189 AGISHKTELAPTCPSNLAFTQN------------WLQPRWFNVPKENCIAQPQRKLILNQ 1332
            A   H        P ++    N             L PR      EN  + PQ +L  ++
Sbjct: 394  AMDRHPGLTNKAVPIHMQLQPNIFTPVVGGGGLAQLPPR-LAPDAENMASLPQSQLWQSR 452

Query: 1333 DSMQDRPLITSSRLTDKMDKERFRLQEQLIIDDGTISISNTYSHGLLNTLAQALQSSGVD 1512
             S+     + S +L           +++L I+ GTISIS+ YS GLLNTL QALQSSGVD
Sbjct: 453  SSVTTECTVASDKLK----------EQELTIEGGTISISSAYSQGLLNTLTQALQSSGVD 502

Query: 1513 LSHAGISVQINLGKRALNRTTA 1578
            LS A ISVQI+LG +A +R TA
Sbjct: 503  LSKASISVQIDLGNKANSRPTA 524


>ref|XP_002445973.1| hypothetical protein SORBIDRAFT_07g028860 [Sorghum bicolor]
            gi|241942323|gb|EES15468.1| hypothetical protein
            SORBIDRAFT_07g028860 [Sorghum bicolor]
          Length = 495

 Score =  216 bits (549), Expect = 3e-53
 Identities = 181/518 (34%), Positives = 231/518 (44%), Gaps = 34/518 (6%)
 Frame = +1

Query: 151  MELEEKKVTHDFLSLYAA----------ESSFEPEDPRSAS-QGFYLKTRDFLQPLDDGR 297
            M L+  K THDFLSLY A          ES   P    + S QG +LKT D LQPL+   
Sbjct: 1    MGLQGDKATHDFLSLYTAAKDAALPLLHESKLPPPPTTTTSHQGLFLKTHDLLQPLERPP 60

Query: 298  EQGGGRSGEMAAEKAVTGGVVLSCTGHSGDARVRTGDAQQPDTTPVRVAMPIGLEAKPEP 477
                     +  +  + GG+           R      +Q   TP        L  +P+P
Sbjct: 61   PPQAPAEKPLH-QHLLPGGIGTFSISPGPRGRGAAAVVKQEQQTP------FALWGQPDP 113

Query: 478  DXXXXXXXXXXXXXXXVPYGVWDDKTAVCREQWPSPIIDAAHGNXXXXXXXXXXXXXXQR 657
                            +P+       A  R Q P P                      Q+
Sbjct: 114  ----------RGHPWSLPFAARCVAVASARPQQPQP----------------------QQ 141

Query: 658  RLTPEMK--GTYKEV-----------DNDEVLGKRKCSSSHTDMTIKVHG---RGSSLNE 789
            +  PE K  G + +            D+D +  +R+ SSS  D  ++  G    GS+  +
Sbjct: 142  QRPPERKACGGFMDAGSRSSGGAGFDDDDGLAARREVSSSLKDHRVEAKGGSCSGSAGTD 201

Query: 790  PRPNTPRSKHSATEQRRRTKINDRFQIMRQIIPHSDQKRDKASFLMEVIEYIRFLQEKVQ 969
              PNTPRSKHSATEQRRR+KINDRFQI+R+I+P +DQKRDKASFL+EVIEYIRFLQEKV+
Sbjct: 202  QLPNTPRSKHSATEQRRRSKINDRFQILREILPQNDQKRDKASFLLEVIEYIRFLQEKVE 261

Query: 970  RYEAPSSTWNQDAAKLMPW-----KSSQPTSNGLSIPDEVIKTDPDPPHLFSTNCIDGIV 1134
            ++EA    WNQ+ AK+MPW     +SS   S      DEV         L   N      
Sbjct: 262  KHEASQPEWNQENAKIMPWSNIYFRSSWKNSQN---KDEVNGDTTTDASLVIKNGSSPRF 318

Query: 1135 PVTIPPSAKQSSATTGIIAGISHKTELAPT--CPSNLAFTQNWLQPRWFNVPKENCIAQP 1308
            P    P    ++A     +G   + EL P    P     T N       NV   N   Q 
Sbjct: 319  PFAAKPGDLNNAAAFETASGAHERVELEPKGCVPRKEDETPN-------NVTN-NVATQQ 370

Query: 1309 QRKLILNQDSMQDRPLITSSRLTDKMDKERFRLQEQLIIDDGTISISNTYSHGLLNTLAQ 1488
              +  L   S  D     +  L +           +L ID+GTIS+S+ YS GLL TL  
Sbjct: 371  AAETQLTNPSPSDDLAGNNGMLNNP----------ELAIDEGTISLSSQYSEGLLTTLNL 420

Query: 1489 ALQSSGVDLSHAGISVQINLGKRALNRTTATSATSTFK 1602
            ALQ+SGVDLS A ISVQINLGKRA+ R        T K
Sbjct: 421  ALQNSGVDLSQASISVQINLGKRAIKRCNDPGPNPTSK 458


>gb|EOY22175.1| Transcription factor BIM1, putative isoform 3 [Theobroma cacao]
          Length = 564

 Score =  215 bits (548), Expect = 4e-53
 Identities = 141/322 (43%), Positives = 192/322 (59%), Gaps = 22/322 (6%)
 Frame = +1

Query: 691  EVDNDEVLGKRKCSSSHTDMTIKVHGRGSSLNEPRPNTPRSKHSATEQRRRTKIND-RFQ 867
            E D D VL K   +++H+   ++V   G S  + + NTPRSKHSATEQRRR+KIND RFQ
Sbjct: 224  EEDEDFVLKKESSTTTHSKGELRVKVDGKSAPDQKANTPRSKHSATEQRRRSKINDSRFQ 283

Query: 868  IMRQIIPHSDQKRDKASFLMEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPWKSSQPTS 1047
            ++R +IPHSDQKRDKASFL+EVIEYI+FLQEKV +YE     W+ + +KLMPW+++   +
Sbjct: 284  MLRDLIPHSDQKRDKASFLLEVIEYIQFLQEKVHKYEGTYQGWSHEPSKLMPWRNNHRPT 343

Query: 1048 NGLSIPDEVIKTDPDPPHLFSTNCIDGIVPV--TIPPSA------KQSSATT----GIIA 1191
               +   + I     P  +FS    +  + V  TIP SA        S+ATT     +  
Sbjct: 344  ENYADQSQAINGVSAPALVFSAKFDEKNITVAPTIPGSAHNPIESDMSTATTFRAIDLSP 403

Query: 1192 GISHKTELAPTC--PSNLAFTQN-----WLQPRWFNVPKE--NCIAQPQRKLILNQDSMQ 1344
            G+ +KT   P    P+  A  Q+      L PR   +P +  NC +QPQ  +  +  S  
Sbjct: 404  GMMNKTMPFPVSLQPNFFASAQSTGAAAQLVPR---LPSDVANCASQPQ-SIACHSGSFT 459

Query: 1345 DRPLITSSRLTDKMDKERFRLQEQLIIDDGTISISNTYSHGLLNTLAQALQSSGVDLSHA 1524
                + S +L           +++L I+ GTISIS+ YS GLLNTL QALQ+SGVDLSHA
Sbjct: 460  TDGALPSEKLK----------EQELTIEGGTISISSVYSQGLLNTLTQALQTSGVDLSHA 509

Query: 1525 GISVQINLGKRALNRTTATSAT 1590
             ISVQI LGKR+ +R TA+++T
Sbjct: 510  SISVQIELGKRSSSRPTASAST 531


>ref|NP_001062109.1| Os08g0490000 [Oryza sativa Japonica Group]
            gi|42408484|dbj|BAD09664.1| bHLH protein family-like
            [Oryza sativa Japonica Group]
            gi|113624078|dbj|BAF24023.1| Os08g0490000 [Oryza sativa
            Japonica Group] gi|215712355|dbj|BAG94482.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218201360|gb|EEC83787.1| hypothetical protein
            OsI_29691 [Oryza sativa Indica Group]
            gi|323388945|gb|ADX60277.1| bHLH transcription factor
            [Oryza sativa Japonica Group]
          Length = 508

 Score =  214 bits (545), Expect = 9e-53
 Identities = 136/323 (42%), Positives = 188/323 (58%), Gaps = 21/323 (6%)
 Frame = +1

Query: 697  DNDEVLGKRKCSSSHTDMTIKVHGRGSSLN-----EPRPNTPRSKHSATEQRRRTKINDR 861
            D+D    +R+ SSS  ++T++V G+G S +     +  PNTPRSKHSATEQRRR+KINDR
Sbjct: 181  DDDGHAARREVSSSLKELTVRVEGKGGSCSGSAGTDQMPNTPRSKHSATEQRRRSKINDR 240

Query: 862  FQIMRQIIPHSDQKRDKASFLMEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPW----- 1026
            FQ++R ++PH+DQKRDKASFL+EVIEYIRFLQEKVQ+YE     WNQ+ AK++PW     
Sbjct: 241  FQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSYPEWNQENAKVVPWTNIYF 300

Query: 1027 -KSSQPTSNGLSIPDEVIKTDPDPPHL----------FSTNCIDGIVPVTIPPSAKQSSA 1173
              S +   N   +P +     PDPP L          F+ N  +     T   S  Q  A
Sbjct: 301  RSSWKNAQNKGQVPAD---HSPDPPELLKNGSPYMFPFTGNSDNNNAVETAAASGAQDQA 357

Query: 1174 TTGIIAGISHKTELAPTCPSNLAFTQNWLQPRWFNVPKENCIAQPQRKLILNQDSMQDRP 1353
             T  ++ +S+++   P+ P+N+A               +   +QP  +L+      +  P
Sbjct: 358  ETDPMSRVSYRSVDTPS-PNNVA---------------DKVTSQPHAQLV------RPSP 395

Query: 1354 LITSSRLTDKMDKERFRLQEQLIIDDGTISISNTYSHGLLNTLAQALQSSGVDLSHAGIS 1533
                +   DK++         L ID+GTIS+S+ YS  LLN L  AL++SG+DLS A IS
Sbjct: 396  AENHTVNCDKLN------NSDLAIDEGTISLSSQYSQELLNKLNHALENSGIDLSQASIS 449

Query: 1534 VQINLGKRALNRTTATSATSTFK 1602
            VQINLGKRA+ R+T  +ATST K
Sbjct: 450  VQINLGKRAMKRST-PAATSTSK 471


>gb|EEE68905.1| hypothetical protein OsJ_27750 [Oryza sativa Japonica Group]
          Length = 467

 Score =  214 bits (545), Expect = 9e-53
 Identities = 136/323 (42%), Positives = 188/323 (58%), Gaps = 21/323 (6%)
 Frame = +1

Query: 697  DNDEVLGKRKCSSSHTDMTIKVHGRGSSLN-----EPRPNTPRSKHSATEQRRRTKINDR 861
            D+D    +R+ SSS  ++T++V G+G S +     +  PNTPRSKHSATEQRRR+KINDR
Sbjct: 140  DDDGHAARREVSSSLKELTVRVEGKGGSCSGSAGTDQMPNTPRSKHSATEQRRRSKINDR 199

Query: 862  FQIMRQIIPHSDQKRDKASFLMEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPW----- 1026
            FQ++R ++PH+DQKRDKASFL+EVIEYIRFLQEKVQ+YE     WNQ+ AK++PW     
Sbjct: 200  FQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSYPEWNQENAKVVPWTNIYF 259

Query: 1027 -KSSQPTSNGLSIPDEVIKTDPDPPHL----------FSTNCIDGIVPVTIPPSAKQSSA 1173
              S +   N   +P +     PDPP L          F+ N  +     T   S  Q  A
Sbjct: 260  RSSWKNAQNKGQVPAD---HSPDPPELLKNGSPYMFPFTGNSDNNNAVETAAASGAQDQA 316

Query: 1174 TTGIIAGISHKTELAPTCPSNLAFTQNWLQPRWFNVPKENCIAQPQRKLILNQDSMQDRP 1353
             T  ++ +S+++   P+ P+N+A               +   +QP  +L+      +  P
Sbjct: 317  ETDPMSRVSYRSVDTPS-PNNVA---------------DKVTSQPHAQLV------RPSP 354

Query: 1354 LITSSRLTDKMDKERFRLQEQLIIDDGTISISNTYSHGLLNTLAQALQSSGVDLSHAGIS 1533
                +   DK++         L ID+GTIS+S+ YS  LLN L  AL++SG+DLS A IS
Sbjct: 355  AENHTVNCDKLN------NSDLAIDEGTISLSSQYSQELLNKLNHALENSGIDLSQASIS 408

Query: 1534 VQINLGKRALNRTTATSATSTFK 1602
            VQINLGKRA+ R+T  +ATST K
Sbjct: 409  VQINLGKRAMKRST-PAATSTSK 430


>tpg|DAA40331.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 506

 Score =  213 bits (542), Expect = 2e-52
 Identities = 170/526 (32%), Positives = 232/526 (44%), Gaps = 35/526 (6%)
 Frame = +1

Query: 124  GIYGNMLESMELEEKKVTHDFLSLYAAESS-----------FEPEDPRSASQGFYLKTRD 270
            GI GN   + E       HDFLSLYAA ++            + + P  +   F LKT D
Sbjct: 2    GIQGNKAATHE-------HDFLSLYAAAAAAAAAKDAPLLLHDSKTPPPSQGNFLLKTHD 54

Query: 271  FLQPLDD--GREQGGGRSGEMAAE--------KAVTGGVVLSCTGHSGDARVRTGDAQQP 420
            FLQP D   G           AAE         A    + L   G  G   +        
Sbjct: 55   FLQPFDQKPGAPPEPSPLPAPAAEIRHRQQVAVAKQRALPLPLPGGVGTFSI-------- 106

Query: 421  DTTPVRVAMPIGLEAKPEPDXXXXXXXXXXXXXXXVPYGVWDDKTAVCR-------EQWP 579
               PV VA+P  +  K EP                 P+ +W    A  +       +QW 
Sbjct: 107  SPAPVSVALPSAV-VKSEPP----------------PFVLWGQPAATLQPGARGHQQQWA 149

Query: 580  SPIIDAAHGNXXXXXXXXXXXXXXQRRLTPE---MKGTYKEVDNDEVLGKRKCSSSHTDM 750
             P   +   +                 +        G     D D +  +R+ SSS  D+
Sbjct: 150  LPFAGSLQVSPPPQQAQPDRKGRGGGGVMDSGSRSSGGAGFDDEDGLTTRREVSSSLQDL 209

Query: 751  TIKVHGRGSSLNE----PRPNTPRSKHSATEQRRRTKINDRFQIMRQIIPHSDQKRDKAS 918
             ++V  +G S ++      PNTPRSKHSATEQRRR+KINDRFQI+R+++PH+DQKRDKA+
Sbjct: 210  AVRVDWKGGSCSDGGTNQGPNTPRSKHSATEQRRRSKINDRFQILRELLPHNDQKRDKAT 269

Query: 919  FLMEVIEYIRFLQEKVQRYEAPSSTWNQDAAKLMPWKSSQPTSNGLSIPDEVIKTDPDPP 1098
            FL+EVIEYIRFLQEK Q+YEA    WNQ+   ++PW   Q   +    P   ++    P 
Sbjct: 270  FLLEVIEYIRFLQEKAQKYEATFPEWNQENPTMLPWSKGQIPGDSPPDPSHFVRNGSSPG 329

Query: 1099 HLFSTNCIDGIVPVTIPPSAKQSSATTGIIAGISHKTELAPTCPSNLAFTQNWLQPRWFN 1278
              F+    D     +   S     A T  +A   +++   P   +N A +Q+  QP+W  
Sbjct: 330  SNFTGKLDDN--HTSAAASGALDQAETNHVASGCYRSSETPANITNNAISQS--QPQWTG 385

Query: 1279 VPKENCIAQPQRKLILNQDSMQDRPLITSSRLTDKMDKERFRLQEQLIIDDGTISISNTY 1458
                                         S + D   K      ++L ID+G IS+S+TY
Sbjct: 386  ----------------------------PSPVDDSAVKSEMLNSQELAIDEGMISVSSTY 417

Query: 1459 SHGLLNTLAQALQSSGVDLSHAGISVQINLGKRALNRTTATSATST 1596
            S  LL +L+ ALQSSGVDLS   ISVQINLGKRA  R+ +    S+
Sbjct: 418  SQELLISLSHALQSSGVDLSQTSISVQINLGKRAGKRSASAGGVSS 463