BLASTX nr result

ID: Zingiber24_contig00020600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00020600
         (515 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY91570.1| hypothetical protein OsI_13205 [Oryza sativa Indi...    62   8e-08
ref|NP_001051027.2| Os03g0705800 [Oryza sativa Japonica Group] g...    62   8e-08
ref|XP_004982036.1| PREDICTED: protein FAF-like, chloroplastic-l...    59   5e-07

>gb|EAY91570.1| hypothetical protein OsI_13205 [Oryza sativa Indica Group]
          Length = 424

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 51/164 (31%), Positives = 68/164 (41%), Gaps = 14/164 (8%)
 Frame = -1

Query: 452 AYDERPAQSNVGNAVESE-------KAADGPVDEPYVHHLVXXXXXXXXXXSLHMCTERL 294
           A D+RPAQ+++ NA++++         A     +PYVH LV          SL +CTE L
Sbjct: 24  AVDDRPAQADIWNAIQADVVDKSATTGAKKAAAKPYVHPLVRRSSSLMSQKSLEVCTESL 83

Query: 293 GSETGSDELSDHEFDCVEMEGDXXXXXXXXXXXXXXXXXEIEDGLFVRRRA-------KE 135
           GSETGS + +    D V+M                      ED  + +  A       KE
Sbjct: 84  GSETGSGDFT-ASLDDVDMAS---LFGAPAAPASKRADQAAEDSFWQQSAAPEEAWERKE 139

Query: 134 MTEVNYHCXXXXXXXXXXXXXXXXXXXXXRDGPCLHMRPHRRDG 3
           +  VNYHC                     RD PCL MRP R+DG
Sbjct: 140 LAAVNYHC-SGGTRSPPRSFPPPLPSMSSRDAPCLQMRPRRQDG 182


>ref|NP_001051027.2| Os03g0705800 [Oryza sativa Japonica Group]
           gi|22450578|gb|AAM97150.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|108710662|gb|ABF98457.1|
           expressed protein [Oryza sativa Japonica Group]
           gi|255674821|dbj|BAF12941.2| Os03g0705800 [Oryza sativa
           Japonica Group]
          Length = 424

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 51/164 (31%), Positives = 68/164 (41%), Gaps = 14/164 (8%)
 Frame = -1

Query: 452 AYDERPAQSNVGNAVESE-------KAADGPVDEPYVHHLVXXXXXXXXXXSLHMCTERL 294
           A D+RPAQ+++ NA++++         A     +PYVH LV          SL +CTE L
Sbjct: 24  AVDDRPAQADIWNAIQADVVDKSATTGAKKAAAKPYVHPLVRRSSSLMSQKSLEVCTESL 83

Query: 293 GSETGSDELSDHEFDCVEMEGDXXXXXXXXXXXXXXXXXEIEDGLFVRRRA-------KE 135
           GSETGS + +    D V+M                      ED  + +  A       KE
Sbjct: 84  GSETGSGDFT-ASLDDVDMAS---LFGAPAAPASKRADQAAEDSFWQQSAAPEEAWERKE 139

Query: 134 MTEVNYHCXXXXXXXXXXXXXXXXXXXXXRDGPCLHMRPHRRDG 3
           +  VNYHC                     RD PCL MRP R+DG
Sbjct: 140 LAAVNYHC-SGGTRSPPRSFPPPLPSMSSRDAPCLQMRPRRQDG 182


>ref|XP_004982036.1| PREDICTED: protein FAF-like, chloroplastic-like [Setaria italica]
          Length = 424

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
 Frame = -1

Query: 446 DERPAQSNVGNAVES---EKAADGPVDEPYVHHLVXXXXXXXXXXSLHMCTERLGSETGS 276
           D+RPAQ +V NA+++   +KAA     +PYVH LV          SL +CTE LG+ETGS
Sbjct: 34  DDRPAQLDVWNAIQAADVDKAAK-KASKPYVHPLVRRSSSLMSQKSLEVCTESLGNETGS 92

Query: 275 DELSDHEFDCVEMEGDXXXXXXXXXXXXXXXXXEIEDGLFVRRRAKEMTEVNYHCXXXXX 96
            + +    D   +                       D    +  AK++  VNYH      
Sbjct: 93  GDFTS-SLDMACLFDSALPAAAATADEPFWQHDAARDCEKEQWEAKDLAAVNYH-RSAGT 150

Query: 95  XXXXXXXXXXXXXXXXRDGPCLHMRPHRRDG 3
                           RDGPCL MRP R+DG
Sbjct: 151 RSPRRAFPPPLPSMSRRDGPCLQMRPRRQDG 181


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