BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00020032
         (872 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop...    78   4e-12
gb|EXB34469.1| Heterogeneous nuclear ribonucleoprotein 27C [Moru...    77   6e-12
ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homol...    77   8e-12
gb|EOX93557.1| RNA-binding family protein isoform 5, partial [Th...    76   1e-11
gb|EOX93553.1| RNA-binding family protein isoform 1 [Theobroma c...    76   1e-11
ref|XP_006474836.1| PREDICTED: heterogeneous nuclear ribonucleop...    74   9e-11
gb|EOY11959.1| RNA-binding family protein [Theobroma cacao]            73   1e-10
gb|EMJ06525.1| hypothetical protein PRUPE_ppa006963mg [Prunus pe...    73   2e-10
gb|ESW18006.1| hypothetical protein PHAVU_006G005300g [Phaseolus...    72   2e-10
gb|ADN95985.1| G-strand specific single-stranded telomere-bindin...    72   3e-10
gb|ADN95984.1| G-strand specific single-stranded telomere-bindin...    72   3e-10
ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleop...    72   3e-10
ref|XP_003542187.1| PREDICTED: heterogeneous nuclear ribonucleop...    70   1e-09
ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ...    70   1e-09
ref|XP_004294926.1| PREDICTED: RNA-binding protein Musashi homol...    69   2e-09
gb|ADN95983.1| G-strand specific single-stranded telomere-bindin...    69   2e-09
emb|CBI39777.3| unnamed protein product [Vitis vinifera]               69   3e-09
gb|EPS72088.1| g-strand specific single-stranded telomere-bindin...    68   4e-09
emb|CAN75779.1| hypothetical protein VITISV_012423 [Vitis vinifera]    68   4e-09
ref|NP_001061525.1| Os08g0320100 [Oryza sativa Japonica Group] g...    67   7e-09

>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
           vinifera] gi|147768836|emb|CAN78130.1| hypothetical
           protein VITISV_036088 [Vitis vinifera]
          Length = 348

 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 49/105 (46%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFN--PTSAFGSEPRTRHFGDSFSGYG-NYSGFAGGSYGSP 700
           NMID+AG+QVEIKKAEPK + N  P  A+GS  R R F D F G+G +Y GF  G +G  
Sbjct: 169 NMIDMAGTQVEIKKAEPKKASNPPPAPAYGSNSRARSFSDGFGGFGSSYGGFDSG-FGPG 227

Query: 699 LYRTXXXXXXXXXXXXXXXXXGSQYDSGYGGF-SRRLENYHGYSS 568
            YRT                 GS++  GYGGF S  L  Y G SS
Sbjct: 228 PYRTPGGVGGRLGGYGGYGSSGSEFGGGYGGFGSSSLGGYRGESS 272


>gb|EXB34469.1| Heterogeneous nuclear ribonucleoprotein 27C [Morus notabilis]
          Length = 353

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 49/109 (44%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFN--PTSAFGSEPRTRHFGDSFSGYGN-YSGFAGGSYGSP 700
           NMID+ G+QVEIKKAEPK + N  P SAF S+ R R + DSFS +GN YSGF    +G  
Sbjct: 169 NMIDMGGTQVEIKKAEPKKASNPAPVSAFRSDSRARPYNDSFSAHGNLYSGFGPDPFGPT 228

Query: 699 LYRTXXXXXXXXXXXXXXXXXGSQYD---SGYGGFS-RRLENYHGYSSR 565
            YR+                  + +D    G GGFS  R E+ +GYSSR
Sbjct: 229 SYRSFGGFGSRFGDYGGGYGNDNDFDGSVGGGGGFSGYRRESSYGYSSR 277


>ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
          Length = 348

 Score = 77.0 bits (188), Expect = 8e-12
 Identities = 48/110 (43%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFNP--TSAFGSEPRTRHFGDSFSGYGNYSGFAGGSYGSPL 697
           NMID+AG+QVEIKKAEPK + NP   SAFGS  R R F D F G+G+  G     +G+  
Sbjct: 169 NMIDMAGTQVEIKKAEPKKASNPPHVSAFGSNSRARSFSDGFGGFGSSYGSYDSGFGAAP 228

Query: 696 YRTXXXXXXXXXXXXXXXXXGSQYDSGYGGF-SRRLENYH-----GYSSR 565
           YR                  G +Y  GYG F S  L  Y      GYSSR
Sbjct: 229 YRAAGGLGSRLGGYGGYGSDGGEYGGGYGSFGSSNLGGYRGDPSLGYSSR 278


>gb|EOX93557.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
          Length = 233

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFNPT--SAFGSEPRTRHFGDSFSGYGNYSGF-AGGSYGSP 700
           NMID+ G+QVEIKKAEPK + NP    A+GSE R R + D + G+G+Y GF +GG +G+ 
Sbjct: 49  NMIDMEGTQVEIKKAEPKKASNPAPGPAYGSESRARSYNDGYGGFGDYGGFGSGGGFGAA 108

Query: 699 LYRTXXXXXXXXXXXXXXXXXGSQYDSGYGGF--------SRRLENYHGYSSR 565
            YR+                 G+ +   Y GF          R E+  GYSSR
Sbjct: 109 PYRSFGGFGSRFGDYGGYGGGGADFGGSYAGFGGGAGAFSGYRGESSFGYSSR 161


>gb|EOX93553.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508701658|gb|EOX93554.1| RNA-binding family protein
           isoform 1 [Theobroma cacao] gi|508701659|gb|EOX93555.1|
           RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508701660|gb|EOX93556.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 344

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFNPT--SAFGSEPRTRHFGDSFSGYGNYSGF-AGGSYGSP 700
           NMID+ G+QVEIKKAEPK + NP    A+GSE R R + D + G+G+Y GF +GG +G+ 
Sbjct: 165 NMIDMEGTQVEIKKAEPKKASNPAPGPAYGSESRARSYNDGYGGFGDYGGFGSGGGFGAA 224

Query: 699 LYRTXXXXXXXXXXXXXXXXXGSQYDSGYGGF--------SRRLENYHGYSSR 565
            YR+                 G+ +   Y GF          R E+  GYSSR
Sbjct: 225 PYRSFGGFGSRFGDYGGYGGGGADFGGSYAGFGGGAGAFSGYRGESSFGYSSR 277


>ref|XP_006474836.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Citrus
           sinensis]
          Length = 349

 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 47/105 (44%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFN--PTSAFGSEPRTRHFGDSFSGYG-NYSGFAGGSYGSP 700
           NMID+AG+QVEIKKAEPK S N  P  ++ S  R R F D F G+G +Y GF GG +G  
Sbjct: 169 NMIDMAGTQVEIKKAEPKKSSNPPPPPSYASNSRGRSFNDGFGGFGSSYGGFDGG-FGPG 227

Query: 699 LYRTXXXXXXXXXXXXXXXXXGSQYDSGYGGF-SRRLENYHGYSS 568
            YRT                 G +Y  GYGGF    L  Y G  S
Sbjct: 228 PYRTPAGLGGRLGGGYGYGSSGGEYGGGYGGFGGSSLGGYRGEPS 272


>gb|EOY11959.1| RNA-binding family protein [Theobroma cacao]
          Length = 348

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 50/111 (45%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFN--PTSAFGSEPRTRHFGDSFSGY-GNYSGFAGGSYGSP 700
           NMID+AG+QVEIKKAEPK + N  P  A+GS  R R + D F GY G+Y GF GG +G  
Sbjct: 169 NMIDMAGTQVEIKKAEPKKASNPPPAPAYGSNSRGRSYDDGFGGYGGSYGGFDGG-FGPG 227

Query: 699 LYRTXXXXXXXXXXXXXXXXXGSQYDSGYGGF------SRRLENYHGYSSR 565
            YRT                 G     GYGGF        R E+  GYSSR
Sbjct: 228 PYRTPGSLGGRLGTGYGYGSGGGGEFGGYGGFGPSSLGGYRGESSLGYSSR 278


>gb|EMJ06525.1| hypothetical protein PRUPE_ppa006963mg [Prunus persica]
          Length = 388

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 48/107 (44%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFNPT--SAFGSEPRTRHFGDSFSGYG-NYSGFAGGSYGSP 700
           NMID+AG+QVEIKKAEPK + NP+   A+GS  R R F D F  YG +Y GF GG    P
Sbjct: 207 NMIDMAGTQVEIKKAEPKKASNPSPAPAYGSNSRARSFNDGFGAYGSSYGGFDGGFAPGP 266

Query: 699 LYRT--XXXXXXXXXXXXXXXXXGSQYDSGYGGF-SRRLENYHGYSS 568
            YRT                     ++  GYGGF S  L  Y G SS
Sbjct: 267 -YRTPGGLGGRYGGGYGYGYGSDSGEFGGGYGGFGSSSLGGYRGESS 312


>gb|ESW18006.1| hypothetical protein PHAVU_006G005300g [Phaseolus vulgaris]
          Length = 353

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 45/114 (39%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFNPTS--AFGSEPRTRHFGDSFSGYG-NYSGFAGGSYGSP 700
           +MID+AG+QVEIKKAEPK S NP S   F S+ R R + D FSG+G +Y  F G  YG  
Sbjct: 168 SMIDMAGTQVEIKKAEPKKSSNPASLAPFASDSRARSYNDGFSGFGDSYGSFGGSGYGPG 227

Query: 699 LYRTXXXXXXXXXXXXXXXXXGSQYDSGYGGFSR---------RLENYHGYSSR 565
            YR+                 G  +   +GG+           R E+  GYSSR
Sbjct: 228 SYRSLGGGFAGRLGDYGGYGAGDDFGGSFGGYGGSGAGGYAGFRGESSFGYSSR 281


>gb|ADN95985.1| G-strand specific single-stranded telomere-binding protein 3
           [Nicotiana tabacum]
          Length = 339

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFNPTS--AFGSEPRTRHFGDSFSGYGN-YSGFAGGSYGSP 700
           N ID+ G+QVEIKKAEPK   NP S  A+GS+ R R +GDS+ G+GN YSGF  G +G  
Sbjct: 165 NRIDMMGTQVEIKKAEPKKPSNPASAPAYGSDSRGRGYGDSYGGFGNSYSGFGSGGFGPA 224

Query: 699 LYRT 688
            YR+
Sbjct: 225 SYRS 228


>gb|ADN95984.1| G-strand specific single-stranded telomere-binding protein 2
           [Nicotiana tabacum]
          Length = 337

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFNPTS--AFGSEPRTRHFGDSFSGYGN-YSGFAGGSYGSP 700
           N  D+ G+QVEIKKAEPK   NP S  A+GS+ R R +GDS+ G+GN YSGF  GS+G  
Sbjct: 165 NRTDMMGTQVEIKKAEPKKPSNPASAPAYGSDSRGRGYGDSYGGFGNSYSGFGSGSFGPA 224

Query: 699 LYRT 688
            YR+
Sbjct: 225 SYRS 228


>ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Vitis
           vinifera]
          Length = 360

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEP-KNSFNPTSA--FGSEPRTRHFGDSFSGYGN--YSGFAGGSYG 706
           NMID+ G+QVEIKKAEP K+S NP  A  FG + R + + D FSGYG+  YSG   G YG
Sbjct: 168 NMIDMEGTQVEIKKAEPKKSSSNPGRAPSFGGDSRMQMYNDGFSGYGSDPYSGLGSGGYG 227

Query: 705 SPLYRTXXXXXXXXXXXXXXXXXGSQYDSGYGGF--SRRLENYHGYSSR 565
              YR                  GS++ + YGG+    R E+  G SSR
Sbjct: 228 PASYRALGGIDSRLGDYGGYGGSGSEFGASYGGYGGGYRGESSFGPSSR 276


>ref|XP_003542187.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Glycine
           max]
          Length = 352

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 42/104 (40%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFNPTS--AFGSEPRTRHFGDSFSGYG-NYSGFAGGSYGSP 700
           NMID+ G+QVEIKKAEPK S NP S   F S+ R R + D F G+G +Y  F G  YG  
Sbjct: 168 NMIDMGGTQVEIKKAEPKKSSNPASLPPFASDSRARSYNDGFGGFGDSYGSFGGSGYGPG 227

Query: 699 LYRTXXXXXXXXXXXXXXXXXGSQYDSGYGGFSRRLENYHGYSS 568
            YR+                         GGF  RL +Y GY +
Sbjct: 228 SYRS------------------------LGGFGGRLGDYGGYGA 247


>ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223538031|gb|EEF39644.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 348

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFNPTSA--FGSEPRTRHFGDSFSGY-GNYSGFAGGSYGSP 700
           NMID+AG+QVEIKKAEPK + NP  A  +GS  R R + DS+ G+ G+Y GF GG +G  
Sbjct: 169 NMIDMAGTQVEIKKAEPKKASNPPPAPSYGSNSRGRSYNDSYGGFGGSYGGFDGG-FGPG 227

Query: 699 LYRTXXXXXXXXXXXXXXXXXGSQYDSGYGGF-SRRLENYHGYSS 568
            YRT                 G  +   YG F    L  Y G SS
Sbjct: 228 PYRTPGSLGGRLSSAYGYGSGGGDFGGSYGSFGGSSLGGYRGESS 272


>ref|XP_004294926.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Fragaria
           vesca subsp. vesca]
          Length = 353

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 49/115 (42%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFN--PTSAFGSEPRTRHFGDSFSGYG-NYSGFAGGSYGSP 700
           NMID+ G+QVEIKKAEPK S N  P  A+GS  R R F D +  YG +Y GF GG    P
Sbjct: 168 NMIDMEGTQVEIKKAEPKKSSNPPPAPAYGSNSRARSFNDGYGPYGSSYGGFDGGFPPGP 227

Query: 699 LYRTXXXXXXXXXXXXXXXXXGS---QYDSGYGGFSR------RLENYHGYSSRL 562
            YRT                 GS   ++ +GYG F        R E+  GY+SRL
Sbjct: 228 -YRTPGALGGGRYGGGYGYGYGSDSGEFGTGYGSFGSSSLGGYRSESSLGYTSRL 281


>gb|ADN95983.1| G-strand specific single-stranded telomere-binding protein 1
           [Nicotiana tabacum]
          Length = 346

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFNPTSA---FGSEPRTRHFGDSFSGYGN-YSGFAGGSYGS 703
           NMID+ G+QVEIKKAEPK   NP S+   +GSE R R + DS+ G+GN YS F  G +G 
Sbjct: 165 NMIDMLGTQVEIKKAEPKKPSNPASSGHGYGSESRGRGYSDSYGGFGNSYSSFGSGGFGP 224

Query: 702 PLYRT 688
             YR+
Sbjct: 225 ASYRS 229


>emb|CBI39777.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFN--PTSAFGSEPRTRHFGDSFSGYG-NYSGFAGGSYGSP 700
           NMID+AG+QVEIKKAEPK + N  P  A+GS  R R F D F G+G +Y GF  G +G  
Sbjct: 169 NMIDMAGTQVEIKKAEPKKASNPPPAPAYGSNSRARSFSDGFGGFGSSYGGFDSG-FGPG 227

Query: 699 LYRTXXXXXXXXXXXXXXXXXGSQYDSGYGGFSRRLENYHGY 574
            YRT                      SG GG+ R  E Y  Y
Sbjct: 228 PYRTPGGVG----------------GSGLGGYGRGGEGYGNY 253


>gb|EPS72088.1| g-strand specific single-stranded telomere-binding protein 1
           [Genlisea aurea]
          Length = 350

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFN--PTSAFGSEPRTRHFGDSFSGYGN-YSGFAGGSYG-S 703
           NMID+AG+QVEIKKAEPK   N  P  A+GS+ R R +GDS+ G+GN Y+ F GG  G  
Sbjct: 165 NMIDMAGTQVEIKKAEPKKPSNLPPAPAYGSDSRGRGYGDSYGGFGNSYNNFGGGGAGFG 224

Query: 702 PLY 694
           P Y
Sbjct: 225 PAY 227


>emb|CAN75779.1| hypothetical protein VITISV_012423 [Vitis vinifera]
          Length = 345

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 48/122 (39%), Positives = 56/122 (45%), Gaps = 20/122 (16%)
 Frame = -3

Query: 870 NMIDLAGSQV------------EIKKAEPKNSFNP--TSAFGSEPRTRHFGDSFSGYGNY 733
           NMID+AG+QV            EIKKAEPK + NP   SAFGS  R R F D F G+G+ 
Sbjct: 154 NMIDMAGTQVSILQWSPRNKHVEIKKAEPKKASNPPHVSAFGSNSRARSFSDGFGGFGSS 213

Query: 732 SGFAGGSYGSPLYRTXXXXXXXXXXXXXXXXXGSQYDSGYGGF-SRRLENYH-----GYS 571
            G     +G+  YR                  G +Y  GYG F S  L  Y      GYS
Sbjct: 214 YGSYDSGFGAAPYRAAGGLGSRLGGYGGYGSDGGEYGGGYGSFGSSNLGGYRGDPSLGYS 273

Query: 570 SR 565
           SR
Sbjct: 274 SR 275


>ref|NP_001061525.1| Os08g0320100 [Oryza sativa Japonica Group]
           gi|35215091|dbj|BAC92448.1| RNA recognition motif
           (RRM)-containing protein-like [Oryza sativa Japonica
           Group] gi|42409159|dbj|BAD10426.1| RNA recognition motif
           (RRM)-containing protein-like [Oryza sativa Japonica
           Group] gi|113623494|dbj|BAF23439.1| Os08g0320100 [Oryza
           sativa Japonica Group] gi|215768436|dbj|BAH00665.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|218200931|gb|EEC83358.1| hypothetical protein
           OsI_28764 [Oryza sativa Indica Group]
           gi|258644640|dbj|BAI39889.1| ribonucleoprotein-like
           [Oryza sativa Indica Group]
          Length = 350

 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 45/102 (44%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
 Frame = -3

Query: 870 NMIDLAGSQVEIKKAEPKNSFNPT-SAFGSEPRTRHFGDSFSGYGNYSGFAGGSYGSPLY 694
           NMIDL GSQVEIKKAEPK   NP   +F SEPR R   D + G GN   + GGS+G   Y
Sbjct: 166 NMIDLNGSQVEIKKAEPKKPSNPPHRSFDSEPRGRPHADGYDGLGNSYNY-GGSFGP--Y 222

Query: 693 RTXXXXXXXXXXXXXXXXXGSQYDSGYGGFSRRLENYHGYSS 568
           R+                    Y SGYG +   L  Y G SS
Sbjct: 223 RS-PGSFGTRPGGYSSSYGPGDYGSGYGAYGGALGGYRGESS 263