BLASTX nr result

ID: Zingiber24_contig00019902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00019902
         (1064 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004968150.1| PREDICTED: extensin-like [Setaria italica]         84   1e-13
ref|XP_003568290.1| PREDICTED: uncharacterized protein LOC100836...    79   4e-12
ref|XP_002455228.1| hypothetical protein SORBIDRAFT_03g006650 [S...    74   7e-11
gb|EMS46533.1| hypothetical protein TRIUR3_16756 [Triticum urartu]     72   3e-10
ref|XP_003530040.2| PREDICTED: uncharacterized protein LOC100808...    68   5e-09
ref|XP_003533353.1| PREDICTED: uncharacterized protein LOC100797...    65   5e-08
ref|NP_001145919.1| hypothetical protein [Zea mays] gi|219884951...    63   2e-07
ref|XP_006451715.1| hypothetical protein CICLE_v10010444mg [Citr...    62   3e-07

>ref|XP_004968150.1| PREDICTED: extensin-like [Setaria italica]
          Length = 675

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 81/293 (27%), Positives = 110/293 (37%), Gaps = 78/293 (26%)
 Frame = -3

Query: 1053 SQQSLKPNLNEAPIPVPGSRMLLFSDAT--IDQKRDLPVSSDP-SYHVPFPATSIA---- 895
            S++   P     P+  P +R + ++D +   D KRD+PV ++  SY +P  A   A    
Sbjct: 374  SRKPQPPKQEVPPVADPTNRAVYYNDRSPPADLKRDMPVGTEAASYRLPVSAPDAAAAAA 433

Query: 894  ---------GYXXXXXXXXXXXXXXXXXXXXXXXXQY-------VSVNPHYMPHPAAGNV 763
                     GY                        Q         + N H++ +PA G  
Sbjct: 434  AAAVTQPPPGYVFAQMHAPPPPQQQQPPPQPPQQPQQPAPQQIVTAGNQHFIHNPATGTF 493

Query: 762  IPASSYY----PIAASHAIQQS-------PQTPHPYDPQIPMYFYPVQ----------PA 646
            IP  SYY    P  A H + Q        PQ  H +DP   MY+ P+Q          P 
Sbjct: 494  IPIQSYYHHPVPQQAPHPVPQQAPQPVPRPQQAHAFDPNTGMYYIPMQQNAPQPYSMPPG 553

Query: 645  ATYNLADPNSTQTQAKPAVP------------------------------THSFAGAGYH 556
            A  +L  P    T  KP VP                                 +AG GYH
Sbjct: 554  AQVSLPPPALVDTTPKPTVPIPQMAVKPELQQPGVYRTTAAPTPAQAPNAAPGYAGVGYH 613

Query: 555  -VLQPHN--LSQPPATML-NYGYEFGGGVDHSHQQLYYSQATSSPALAPQGQP 409
             V+Q H+    QP A M  NYGYE+    D +  Q+YYSQA + P + PQ QP
Sbjct: 614  HVIQSHHHPAQQPVANMAGNYGYEYA---DPNRPQVYYSQAAAPPTMPPQYQP 663


>ref|XP_003568290.1| PREDICTED: uncharacterized protein LOC100836637 isoform 2
            [Brachypodium distachyon]
          Length = 673

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 76/273 (27%), Positives = 103/273 (37%), Gaps = 63/273 (23%)
 Frame = -3

Query: 1038 KPNLNEAPIPVPGSRMLLFSDATIDQ--KRDLPVSSDP-SYHVPFPATSIA--------- 895
            +P     P   P +R + ++D +  +  KRD+PV +D  SY  P P   +A         
Sbjct: 389  QPKPEVPPATDPNNRAMYYNDRSPREELKRDMPVGTDAASYRTPVPPPEVAAAPAAAAQP 448

Query: 894  --GYXXXXXXXXXXXXXXXXXXXXXXXXQYVSV-NPHYMPHPAAGNVIPASSYYPIAASH 724
              GY                        QYV+  N H++ +PA G  IP  SYY  A   
Sbjct: 449  PPGYMYAQMQPQQHPPPQPQQSHQPAPQQYVTAGNQHFIHNPATGTFIPIQSYYHQAVPQ 508

Query: 723  AIQQSPQTPHPYDPQIPMYFYPVQP-----------AATYNLADPNSTQTQAKPAVP--- 586
               Q  Q P  +DP   MY+ P++P           AA      P    +  KP VP   
Sbjct: 509  PAPQQQQAP-AFDPNTGMYYIPMRPNAPQQYSIPAGAAAPMQPPPTLVDSAPKPTVPIPQ 567

Query: 585  -------------------------------THSFAGAGY-HVLQPHN-LSQPPATML-N 508
                                             ++AG GY HV+Q H+   QP ATM  N
Sbjct: 568  QYMKPELQQQQPGMYRTAGPAAPAPGAPNTAAPAYAGMGYHHVIQSHHPAPQPGATMAGN 627

Query: 507  YGYEFGGGVDHSHQQLYYSQATSSPALAPQGQP 409
            YGYE+         Q++YSQA    +L PQ QP
Sbjct: 628  YGYEYA----DPRAQVFYSQAAPPASLPPQYQP 656


>ref|XP_002455228.1| hypothetical protein SORBIDRAFT_03g006650 [Sorghum bicolor]
            gi|241927203|gb|EES00348.1| hypothetical protein
            SORBIDRAFT_03g006650 [Sorghum bicolor]
          Length = 663

 Score = 74.3 bits (181), Expect = 7e-11
 Identities = 84/281 (29%), Positives = 110/281 (39%), Gaps = 71/281 (25%)
 Frame = -3

Query: 1038 KPNLNEAPIPV-PGSRMLLFSDAT--IDQKRDLPVSSDP-SYHVPFPATSIA-------- 895
            +P   E P  V P +R + ++D +   D KRD+PV ++  SY +P  A   A        
Sbjct: 378  QPMKQEVPPAVDPSNRAVYYNDRSPPADLKRDMPVGTEAASYRLPGSAPDAAAAAAATQV 437

Query: 894  --GYXXXXXXXXXXXXXXXXXXXXXXXXQ-----YVSV-NPHYMPHPAAGNVIPASSYYP 739
              GY                        Q      VS  N H++ +PA G  IP  SYY 
Sbjct: 438  PPGYVLTQMHVPQPPQQHPPPQQQQQPQQPAPQQIVSAGNQHFIHNPATGTFIPIQSYY- 496

Query: 738  IAASHAI-QQSPQT-PHP-----YDPQIPMYFYPVQ----------PAATYNLADPNSTQ 610
                H + QQ+PQT P P     +DP   MY+ P+Q          P A   L  P    
Sbjct: 497  ---HHPVPQQAPQTVPRPQQAPTFDPNTGMYYLPMQQNAHQPYSMPPGAQVTLPPPTLVD 553

Query: 609  TQAKPAVP------------------------------THSFAGAGY-HVLQPHN--LSQ 529
            T  KP VP                                 +AG  Y HV+Q H+    Q
Sbjct: 554  TTPKPTVPIPQMAVRPELQQPGVYRTTAAATPAPAPNAAPGYAGMAYHHVIQSHHHPSPQ 613

Query: 528  PPATM-LNYGYEFGGGVDHSHQQLYYSQATSSPALAPQGQP 409
            P A M  N+GYE+    D +  Q+YYSQA + P L PQ QP
Sbjct: 614  PVANMGGNFGYEY---ADPTRPQVYYSQAAAPPTLPPQYQP 651


>gb|EMS46533.1| hypothetical protein TRIUR3_16756 [Triticum urartu]
          Length = 308

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 57/148 (38%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
 Frame = -3

Query: 801 NPHYMPHPAAGNVIPASSYYPIAASHAIQQSPQTPHPYDPQIPMYFYPVQ----PAATY- 637
           N H++ +PA G  IP  SYY         Q  Q+P  +DP   MY+ P+Q    P   Y 
Sbjct: 144 NQHFIHNPATGTFIPIQSYYQQTVPQQAPQQQQSP-AFDPNTGMYYIPMQRPNAPQRQYM 202

Query: 636 --NLADPNSTQTQAKPAV-----PTHSFAGAGY-HVLQPHN--LSQPPATML-NYGY-EF 493
              L  P   +T A  A       T ++AG GY HV+Q H+   SQPP TM  NYGY E+
Sbjct: 203 KPELQQPGMYRTAAPAAAAPGPNTTPNYAGMGYHHVMQSHHHPASQPPPTMAGNYGYPEY 262

Query: 492 GGGVDHSHQQLYYSQATSSPA-LAPQGQ 412
                    Q++YSQA + PA L PQ Q
Sbjct: 263 AA---DPRAQVFYSQAGAPPASLPPQYQ 287


>ref|XP_003530040.2| PREDICTED: uncharacterized protein LOC100808843 [Glycine max]
          Length = 677

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 62/187 (33%), Positives = 76/187 (40%), Gaps = 53/187 (28%)
 Frame = -3

Query: 813  YVSVNPHYMPHPAAGNVIPASSYYPIAASHAIQQSPQTPHP--YDPQIPMYFYPVQP--- 649
            +V  + HY+ HPAA   +P SSYYP+ A       PQ  HP     Q P+Y  PV P   
Sbjct: 482  FVHASTHYIHHPAATGPVPVSSYYPVYA----PPQPQQLHPPIGQQQYPVYVMPVGPTQV 537

Query: 648  ------AATYNLADPN-----------STQTQA------KPAVPTHSF-----AGAGY-- 559
                  A   N+ADPN           S  T A       P  PT S      + +GY  
Sbjct: 538  TQPYNMALQPNIADPNVVASSRSLMPQSIVTSAAYKDGTPPIYPTKSVSSTMASNSGYAP 597

Query: 558  ---HVLQP-----HNLSQPP----------ATMLNYGYEFGGGVDHSHQQLYYSQATSSP 433
               +  QP     H    PP           T  NYGYE+GG   H   Q YY+Q T++ 
Sbjct: 598  IPTNQFQPQYVGLHQFHHPPQSIAVAPSSTTTNNNYGYEYGG---HVQDQAYYTQQTTTA 654

Query: 432  ALAPQGQ 412
             L PQ Q
Sbjct: 655  PLLPQYQ 661


>ref|XP_003533353.1| PREDICTED: uncharacterized protein LOC100797907 [Glycine max]
          Length = 669

 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 55/187 (29%), Positives = 74/187 (39%), Gaps = 54/187 (28%)
 Frame = -3

Query: 810  VSVNPHYMPHPAAGNVIPASSYYPIAASHAIQQSPQTPHPYDPQIPMYFYPVQP------ 649
            +  N HY+ HPAA   +P SSYYP+ A    Q     PH    Q P+Y  PV P      
Sbjct: 454  IHANNHYIHHPAATGPVPVSSYYPVYAPPP-QLQQLHPHISQQQYPVYVMPVGPTQVTQP 512

Query: 648  ---AATYNLADPN---------------------------------STQTQAKPA---VP 586
               A  +N++DPN                                  T   + P    +P
Sbjct: 513  YNMALQHNISDPNVVASSRPLMPQSVVTSAAYKDGTPPIYSTKSLSPTMAPSNPGYAPIP 572

Query: 585  THSF----AGAGYHVLQPHNLSQPPA----TMLNYGYEFGGGVDHSHQQLYYS-QATSSP 433
            T+ F     G      QP +++  P+    T  NYGYE+GG   H   Q YY+ Q T++ 
Sbjct: 573  TNQFQPQYVGLSQFHHQPQSIAVAPSSTTTTTTNYGYEYGG---HVQDQAYYTQQQTTNA 629

Query: 432  ALAPQGQ 412
             L PQ Q
Sbjct: 630  TLLPQYQ 636


>ref|NP_001145919.1| hypothetical protein [Zea mays] gi|219884951|gb|ACL52850.1| unknown
            [Zea mays] gi|413947349|gb|AFW79998.1| hypothetical
            protein ZEAMMB73_538141 [Zea mays]
          Length = 665

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 56/186 (30%), Positives = 76/186 (40%), Gaps = 55/186 (29%)
 Frame = -3

Query: 801  NPHYMPHPAAGNVIPASSYY-----PIAASHAIQQSPQTPHPYDPQIPMYFYPVQ----- 652
            N H++ +PA G  IP  SYY     P  A   + +  Q P  +DP   MY+ P+Q     
Sbjct: 472  NQHFIHNPATGTFIPIQSYYHHHPVPQQAPQTVPRQQQAP-AFDPNTGMYYLPMQQNAHQ 530

Query: 651  -----PAATYNLADPNST--QTQAKPAVP------------------------------- 586
                 P A   L  P  T   T  KP VP                               
Sbjct: 531  PYSMPPGAQATLPPPPPTLVDTAPKPTVPIPQMAVRPELQQQPGVYRTTAAATPAPAPSA 590

Query: 585  -THSFAGAGY-HVLQPHN--LSQPPATML--NYGYEFGGGVDHSHQQLYYSQATSS-PAL 427
                +AG  Y H++Q H+    QP + M+  N+GYE+    D +  Q+YYSQA ++ P L
Sbjct: 591  APPGYAGMAYHHIIQSHHHPSPQPVSNMMAGNFGYEY---ADPTRPQVYYSQAAAAPPTL 647

Query: 426  APQGQP 409
             PQ QP
Sbjct: 648  PPQYQP 653


>ref|XP_006451715.1| hypothetical protein CICLE_v10010444mg [Citrus clementina]
           gi|557554941|gb|ESR64955.1| hypothetical protein
           CICLE_v10010444mg [Citrus clementina]
          Length = 640

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 53/170 (31%), Positives = 74/170 (43%), Gaps = 43/170 (25%)
 Frame = -3

Query: 813 YVSVNPHYMPHPAAGNVIPASSYYPIAASHAIQQSPQTPHPYDPQIPMYFY-PVQPAATY 637
           YV  + HY+PH A    +P SSYYP+ AS   QQ      P D Q P+Y   P Q  A Y
Sbjct: 435 YVHASMHYIPHQAT-TPVPISSYYPVYASP--QQQILHHRPIDQQYPVYVMSPAQTQAPY 491

Query: 636 -----NLADPNS-----------------------TQTQAKPA----------VPTHSFA 571
                N+A+ N+                       T TQ KP           +P +   
Sbjct: 492 ASMQPNIAEANNVAASSRALTAVYKEGTPPIYPPKTATQPKPEMQQQYLGYSQIPANQIQ 551

Query: 570 G--AGYHVLQ--PHNLSQPPATMLNYGYEFGGGVDHSHQQLYYSQATSSP 433
               GY  +Q   H+++   A + NYGYE+   V  SH+Q+YY++  +SP
Sbjct: 552 QQFVGYSQMQHPSHSIAVASAAIANYGYEYANPV--SHEQVYYTEHQASP 599


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