BLASTX nr result
ID: Zingiber24_contig00019896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00019896
(500 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002304510.1| hypothetical protein POPTR_0003s13030g [Popu... 171 1e-40
gb|EMJ10802.1| hypothetical protein PRUPE_ppa011480mg [Prunus pe... 170 2e-40
ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putati... 169 4e-40
ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding prote... 169 5e-40
ref|XP_004298819.1| PREDICTED: uncharacterized RNA-binding prote... 166 3e-39
gb|EOY24793.1| RNA-binding family protein [Theobroma cacao] 161 7e-38
ref|XP_006476526.1| PREDICTED: uncharacterized RNA-binding prote... 160 2e-37
ref|XP_006476525.1| PREDICTED: uncharacterized RNA-binding prote... 160 2e-37
ref|XP_006476524.1| PREDICTED: uncharacterized RNA-binding prote... 160 2e-37
gb|EXB37321.1| Uncharacterized RNA-binding protein [Morus notabi... 159 3e-37
ref|XP_001778182.1| predicted protein [Physcomitrella patens] gi... 159 5e-37
ref|XP_006659363.1| PREDICTED: serine/arginine-rich splicing fac... 158 6e-37
ref|XP_004973345.1| PREDICTED: serine/arginine-rich splicing fac... 158 8e-37
gb|EEE68615.1| hypothetical protein OsJ_27155 [Oryza sativa Japo... 157 1e-36
ref|NP_001061706.1| Os08g0385900 [Oryza sativa Japonica Group] g... 157 2e-36
ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding prote... 155 7e-36
gb|EMT21403.1| Putative RNA-binding protein [Aegilops tauschii] 154 9e-36
ref|NP_001148693.1| LOC100282309 [Zea mays] gi|195621452|gb|ACG3... 154 1e-35
gb|ACF82503.1| unknown [Zea mays] gi|219888871|gb|ACL54810.1| un... 154 1e-35
ref|XP_003563207.1| PREDICTED: transformer-2 sex-determining pro... 153 2e-35
>ref|XP_002304510.1| hypothetical protein POPTR_0003s13030g [Populus trichocarpa]
gi|222841942|gb|EEE79489.1| hypothetical protein
POPTR_0003s13030g [Populus trichocarpa]
Length = 208
Score = 171 bits (432), Expect = 1e-40
Identities = 80/93 (86%), Positives = 89/93 (95%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV +SDLEKYF+ EGKVLEC+++ DPRTRESRGFAFVTMET+EDANR
Sbjct: 45 NPGNNLYVTGLSTRVTSSDLEKYFSSEGKVLECHLVTDPRTRESRGFAFVTMETVEDANR 104
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
CVKYL+ SVLEGR+ITVEKAKRKRGRTPTPG+Y
Sbjct: 105 CVKYLNRSVLEGRVITVEKAKRKRGRTPTPGRY 137
>gb|EMJ10802.1| hypothetical protein PRUPE_ppa011480mg [Prunus persica]
Length = 208
Score = 170 bits (430), Expect = 2e-40
Identities = 79/93 (84%), Positives = 88/93 (94%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV +SDLEK+FNKEGKVLEC+++ DPRTRESRGF FVTMET+EDA R
Sbjct: 44 NPGNNLYVTGLSTRVTSSDLEKFFNKEGKVLECHLVTDPRTRESRGFGFVTMETVEDAER 103
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
CVKYL+ SVLEGRL+TVEKAKRKRGRTPTPG+Y
Sbjct: 104 CVKYLNRSVLEGRLVTVEKAKRKRGRTPTPGRY 136
>ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
gi|223549733|gb|EEF51221.1|
Arginine/serine-rich-splicing factor, putative [Ricinus
communis]
Length = 204
Score = 169 bits (428), Expect = 4e-40
Identities = 80/93 (86%), Positives = 86/93 (92%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV DLEKYF KEGKVLEC+++ DPRTRESRGFAFVTMETLEDA R
Sbjct: 44 NPGNNLYVTGLSTRVTTGDLEKYFGKEGKVLECHLVTDPRTRESRGFAFVTMETLEDAER 103
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
CVKYL+ SVLEGRLITVEKAKR+RGRTPTPG+Y
Sbjct: 104 CVKYLNRSVLEGRLITVEKAKRRRGRTPTPGRY 136
>ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01 [Vitis
vinifera]
Length = 211
Score = 169 bits (427), Expect = 5e-40
Identities = 78/93 (83%), Positives = 88/93 (94%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRVN SDLEKYFN EGKV+EC+++ DPRTRESRGF FVTMET+EDA+R
Sbjct: 51 NPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMETVEDADR 110
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
C+KYL+ SVLEGRLITVEKAKR+RGRTPTPG+Y
Sbjct: 111 CIKYLNRSVLEGRLITVEKAKRRRGRTPTPGRY 143
>ref|XP_004298819.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Fragaria vesca subsp. vesca]
Length = 222
Score = 166 bits (420), Expect = 3e-39
Identities = 75/93 (80%), Positives = 89/93 (95%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV ++D+EK+FNKEGKVL+C+++ DPR+RESRGFAFVTMET+EDA R
Sbjct: 44 NPGNNLYVTGLSTRVTSADVEKFFNKEGKVLDCHLVTDPRSRESRGFAFVTMETVEDAER 103
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
C+KYL+ SVLEGRL+TVEKAKRKRGRTPTPG+Y
Sbjct: 104 CIKYLNRSVLEGRLVTVEKAKRKRGRTPTPGRY 136
>gb|EOY24793.1| RNA-binding family protein [Theobroma cacao]
Length = 200
Score = 161 bits (408), Expect = 7e-38
Identities = 75/93 (80%), Positives = 84/93 (90%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV +DLEKYF EGKV+EC+++ DPRTRESRGFAFVTMET+E A R
Sbjct: 40 NPGNNLYVTGLSTRVTTADLEKYFGNEGKVVECHLVTDPRTRESRGFAFVTMETVEGAER 99
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
C+KYL+ SVLEGRLITVEKAKR RGRTPTPG+Y
Sbjct: 100 CIKYLNRSVLEGRLITVEKAKRSRGRTPTPGRY 132
>ref|XP_006476526.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X3 [Citrus sinensis]
Length = 156
Score = 160 bits (404), Expect = 2e-37
Identities = 75/93 (80%), Positives = 84/93 (90%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV N+DLEK+F EGKV EC+++ DPRTRESRGFAFVTMET+E A+R
Sbjct: 47 NPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESRGFAFVTMETVEGADR 106
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
C+KYL+ SVLEGRLITVEKAKR RGRTPTPG Y
Sbjct: 107 CIKYLNRSVLEGRLITVEKAKRSRGRTPTPGHY 139
>ref|XP_006476525.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X2 [Citrus sinensis]
Length = 201
Score = 160 bits (404), Expect = 2e-37
Identities = 75/93 (80%), Positives = 84/93 (90%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV N+DLEK+F EGKV EC+++ DPRTRESRGFAFVTMET+E A+R
Sbjct: 35 NPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESRGFAFVTMETVEGADR 94
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
C+KYL+ SVLEGRLITVEKAKR RGRTPTPG Y
Sbjct: 95 CIKYLNRSVLEGRLITVEKAKRSRGRTPTPGHY 127
>ref|XP_006476524.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X1 [Citrus sinensis]
Length = 213
Score = 160 bits (404), Expect = 2e-37
Identities = 75/93 (80%), Positives = 84/93 (90%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV N+DLEK+F EGKV EC+++ DPRTRESRGFAFVTMET+E A+R
Sbjct: 47 NPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESRGFAFVTMETVEGADR 106
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
C+KYL+ SVLEGRLITVEKAKR RGRTPTPG Y
Sbjct: 107 CIKYLNRSVLEGRLITVEKAKRSRGRTPTPGHY 139
>gb|EXB37321.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 314
Score = 159 bits (403), Expect = 3e-37
Identities = 73/96 (76%), Positives = 85/96 (88%)
Frame = -1
Query: 359 GVGNPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLED 180
G NPGNNLYVTGLSTRV SDLEK+F KEGKV+ C+++ DP T+ESRGF FVTMET+ED
Sbjct: 151 GADNPGNNLYVTGLSTRVTTSDLEKFFGKEGKVVACHLVTDPHTKESRGFGFVTMETVED 210
Query: 179 ANRCVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
A+RC+K L+ SVLEGRL+TVEKAKRKRGRTPTPG+Y
Sbjct: 211 ADRCIKQLNRSVLEGRLVTVEKAKRKRGRTPTPGRY 246
>ref|XP_001778182.1| predicted protein [Physcomitrella patens]
gi|162670395|gb|EDQ56964.1| predicted protein
[Physcomitrella patens]
Length = 172
Score = 159 bits (401), Expect = 5e-37
Identities = 72/95 (75%), Positives = 85/95 (89%)
Frame = -1
Query: 356 VGNPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDA 177
+ NPGNNLYVTGLSTRVN DL+++F++EGKVLEC +++DPRTRESRGF FVTME LEDA
Sbjct: 8 INNPGNNLYVTGLSTRVNEKDLQEHFSREGKVLECRLVLDPRTRESRGFGFVTMEHLEDA 67
Query: 176 NRCVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
RC+KYL+ S LEGR+ITVEKAKRKR RTPTPG+Y
Sbjct: 68 ERCIKYLNRSTLEGRMITVEKAKRKRARTPTPGEY 102
>ref|XP_006659363.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform X1
[Oryza brachyantha]
Length = 277
Score = 158 bits (400), Expect = 6e-37
Identities = 72/93 (77%), Positives = 84/93 (90%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV DLEK+F+KEGKV C+V++DPRT+ESRGFAFVTM+T++DA R
Sbjct: 86 NPGNNLYVTGLSTRVTEEDLEKFFSKEGKVQSCHVVLDPRTKESRGFAFVTMDTVDDARR 145
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
C+KYLH +VLEGRL+TVEKAKR R RTPTPGKY
Sbjct: 146 CIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKY 178
>ref|XP_004973345.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform X1
[Setaria italica] gi|514795629|ref|XP_004973346.1|
PREDICTED: serine/arginine-rich splicing factor 2-like
isoform X2 [Setaria italica]
gi|514795632|ref|XP_004973347.1| PREDICTED:
serine/arginine-rich splicing factor 2-like isoform X3
[Setaria italica]
Length = 283
Score = 158 bits (399), Expect = 8e-37
Identities = 72/93 (77%), Positives = 84/93 (90%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV DLEK+F+KEGKV C+V++DPR++ESRGFAFVTM+T+EDA R
Sbjct: 86 NPGNNLYVTGLSTRVTEDDLEKFFSKEGKVKNCHVVLDPRSKESRGFAFVTMDTVEDARR 145
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
C+KYLH +VLEGRL+TVEKAKR R RTPTPGKY
Sbjct: 146 CIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKY 178
>gb|EEE68615.1| hypothetical protein OsJ_27155 [Oryza sativa Japonica Group]
Length = 271
Score = 157 bits (398), Expect = 1e-36
Identities = 84/172 (48%), Positives = 102/172 (59%), Gaps = 34/172 (19%)
Frame = -1
Query: 485 MSQTKEVKYTSRSVT----------------------------------PPRNXXXXXXX 408
MSQ+KEV+YT+RS+T PP
Sbjct: 1 MSQSKEVRYTARSITPPADRNGTSKSKSPTPVRRSTSRSPPPKKSDSRSPPPRRRSTSRS 60
Query: 407 XXXXXXXXXXXXXXSAGVGNPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRT 228
+ NPGNNLYVTGLSTRV DLEK+F+KEGKV C+V++DPRT
Sbjct: 61 PRPRRHGRSRSRSRDDDLRNPGNNLYVTGLSTRVTEEDLEKFFSKEGKVQSCHVVLDPRT 120
Query: 227 RESRGFAFVTMETLEDANRCVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
+ESRGFAFVTM++++DA RC+KYLH +VLEGRL+TVEKAKR R RTPTPGKY
Sbjct: 121 KESRGFAFVTMDSVDDARRCIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKY 172
>ref|NP_001061706.1| Os08g0385900 [Oryza sativa Japonica Group]
gi|40253470|dbj|BAD05420.1| putative transformer-SR
ribonucleoprotein [Oryza sativa Japonica Group]
gi|40253902|dbj|BAD05836.1| putative transformer-SR
ribonucleoprotein [Oryza sativa Japonica Group]
gi|113623675|dbj|BAF23620.1| Os08g0385900 [Oryza sativa
Japonica Group] gi|215697910|dbj|BAG92152.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 279
Score = 157 bits (396), Expect = 2e-36
Identities = 71/93 (76%), Positives = 84/93 (90%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV DLEK+F+KEGKV C+V++DPRT+ESRGFAFVTM++++DA R
Sbjct: 88 NPGNNLYVTGLSTRVTEEDLEKFFSKEGKVQSCHVVLDPRTKESRGFAFVTMDSVDDARR 147
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
C+KYLH +VLEGRL+TVEKAKR R RTPTPGKY
Sbjct: 148 CIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKY 180
>ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X1 [Glycine max]
Length = 191
Score = 155 bits (391), Expect = 7e-36
Identities = 72/97 (74%), Positives = 84/97 (86%)
Frame = -1
Query: 362 AGVGNPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLE 183
A V NPGNNLYVTGLSTR+ +SDL KYF+KEGKV++C+++ DP T+ESRGF FVTMET +
Sbjct: 39 ADVENPGNNLYVTGLSTRITDSDLHKYFSKEGKVVDCHLVKDPHTKESRGFGFVTMETND 98
Query: 182 DANRCVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
DA C+KYL+ SV EGRLITVEKAKR RGRTPTPGKY
Sbjct: 99 DAECCIKYLNRSVFEGRLITVEKAKRNRGRTPTPGKY 135
>gb|EMT21403.1| Putative RNA-binding protein [Aegilops tauschii]
Length = 247
Score = 154 bits (390), Expect = 9e-36
Identities = 71/95 (74%), Positives = 83/95 (87%)
Frame = -1
Query: 356 VGNPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDA 177
V NPGNNLYVTGLSTR +DLEK+F+KEGKV +C V++DPRT+ESRGFAFVTME +EDA
Sbjct: 86 VRNPGNNLYVTGLSTRTQETDLEKFFSKEGKVKDCRVVIDPRTKESRGFAFVTMENVEDA 145
Query: 176 NRCVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
RC+KYLH +VLEGRLI+V KAKR R RTPTPG+Y
Sbjct: 146 RRCIKYLHRTVLEGRLISVAKAKRTRERTPTPGEY 180
>ref|NP_001148693.1| LOC100282309 [Zea mays] gi|195621452|gb|ACG32556.1|
arginine/serine-rich splicing factor 10 [Zea mays]
Length = 295
Score = 154 bits (389), Expect = 1e-35
Identities = 72/93 (77%), Positives = 82/93 (88%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV DLEK+F+KEGKV C+V++DPRT+ESRGFAFVTM+TLE A R
Sbjct: 83 NPGNNLYVTGLSTRVTEDDLEKFFSKEGKVKNCHVVLDPRTKESRGFAFVTMDTLEGARR 142
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
+KYLH +VLEGRL+TVEKAKR R RTPTPGKY
Sbjct: 143 SIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKY 175
>gb|ACF82503.1| unknown [Zea mays] gi|219888871|gb|ACL54810.1| unknown [Zea mays]
gi|413922157|gb|AFW62089.1| arginine/serine-rich
splicing factor 10 isoform 1 [Zea mays]
gi|413922158|gb|AFW62090.1| arginine/serine-rich
splicing factor 10 isoform 2 [Zea mays]
gi|413922159|gb|AFW62091.1| arginine/serine-rich
splicing factor 10 isoform 3 [Zea mays]
Length = 295
Score = 154 bits (389), Expect = 1e-35
Identities = 72/93 (77%), Positives = 82/93 (88%)
Frame = -1
Query: 350 NPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDANR 171
NPGNNLYVTGLSTRV DLEK+F+KEGKV C+V++DPRT+ESRGFAFVTM+TLE A R
Sbjct: 83 NPGNNLYVTGLSTRVTEDDLEKFFSKEGKVKNCHVVLDPRTKESRGFAFVTMDTLEGARR 142
Query: 170 CVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
+KYLH +VLEGRL+TVEKAKR R RTPTPGKY
Sbjct: 143 SIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKY 175
>ref|XP_003563207.1| PREDICTED: transformer-2 sex-determining protein-like [Brachypodium
distachyon]
Length = 241
Score = 153 bits (387), Expect = 2e-35
Identities = 70/95 (73%), Positives = 84/95 (88%)
Frame = -1
Query: 356 VGNPGNNLYVTGLSTRVNNSDLEKYFNKEGKVLECNVIVDPRTRESRGFAFVTMETLEDA 177
V NPGNNLYVTGLSTR + DLEK+F+KEGKV +C+V++DPRT+ESRGFAFVTM+ +EDA
Sbjct: 105 VRNPGNNLYVTGLSTRTSGDDLEKFFSKEGKVKDCHVVMDPRTKESRGFAFVTMDNIEDA 164
Query: 176 NRCVKYLHHSVLEGRLITVEKAKRKRGRTPTPGKY 72
RC+KYLH +VLEGRLI+V KAKR R RTPTPG+Y
Sbjct: 165 RRCIKYLHRTVLEGRLISVAKAKRTRKRTPTPGEY 199