BLASTX nr result
ID: Zingiber24_contig00019887
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00019887
(498 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228... 60 4e-07
ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218... 60 4e-07
ref|XP_002322827.2| hypothetical protein POPTR_0016s08010g [Popu... 59 5e-07
ref|XP_006855084.1| hypothetical protein AMTR_s00031p00165100 [A... 59 5e-07
gb|EOY08267.1| RNA-binding family protein isoform 3 [Theobroma c... 59 7e-07
gb|EOY08266.1| RNA-binding family protein isoform 2 [Theobroma c... 59 7e-07
ref|XP_004302980.1| PREDICTED: heterogeneous nuclear ribonucleop... 59 7e-07
ref|XP_004302979.1| PREDICTED: heterogeneous nuclear ribonucleop... 59 7e-07
gb|EMJ03171.1| hypothetical protein PRUPE_ppa004785mg [Prunus pe... 59 7e-07
ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleop... 59 7e-07
emb|CBI28315.3| unnamed protein product [Vitis vinifera] 59 7e-07
ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleop... 59 7e-07
ref|XP_002523815.1| nucleolar phosphoprotein, putative [Ricinus ... 59 7e-07
gb|AAB62861.1| similar to nucleolin protein [Arabidopsis thalian... 59 9e-07
ref|NP_001190648.1| RNA recognition motif-containing protein [Ar... 59 9e-07
ref|NP_001190647.1| RNA recognition motif-containing protein [Ar... 59 9e-07
ref|NP_567192.1| RNA recognition motif-containing protein [Arabi... 59 9e-07
ref|XP_002308472.2| RNA recognition motif-containing family prot... 58 2e-06
gb|ABK24755.1| unknown [Picea sitchensis] 58 2e-06
ref|XP_006662859.1| PREDICTED: heterogeneous nuclear ribonucleop... 57 2e-06
>ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228216 [Cucumis sativus]
Length = 828
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPGFPVAT 393
YGRG TPAG AM+PM+LPDGR+GYVLQQPG + T
Sbjct: 742 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLT 776
>ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218373 [Cucumis sativus]
Length = 784
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPGFPVAT 393
YGRG TPAG AM+PM+LPDGR+GYVLQQPG + T
Sbjct: 698 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLT 732
>ref|XP_002322827.2| hypothetical protein POPTR_0016s08010g [Populus trichocarpa]
gi|550321081|gb|EEF04588.2| hypothetical protein
POPTR_0016s08010g [Populus trichocarpa]
Length = 485
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPGFPVATHQQ 384
YGRG TPAG AM+PM+LPDGR+GYVLQQPG + Q
Sbjct: 419 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPGMQAHSSPQ 456
>ref|XP_006855084.1| hypothetical protein AMTR_s00031p00165100 [Amborella trichopoda]
gi|548858813|gb|ERN16551.1| hypothetical protein
AMTR_s00031p00165100 [Amborella trichopoda]
Length = 489
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPG 408
YGRG TPAG MVPM+LPDGRLGYVLQQPG
Sbjct: 422 YGRGPTPAGMTMVPMLLPDGRLGYVLQQPG 451
>gb|EOY08267.1| RNA-binding family protein isoform 3 [Theobroma cacao]
Length = 475
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPG 408
YGRG TPAG AM+PM+LPDGR+GYVLQQPG
Sbjct: 405 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPG 434
>gb|EOY08266.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508716372|gb|EOY08269.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 474
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPG 408
YGRG TPAG AM+PM+LPDGR+GYVLQQPG
Sbjct: 404 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPG 433
>ref|XP_004302980.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 467
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPG 408
YGRG TPAG AM+PM+LPDGR+GYVLQQPG
Sbjct: 400 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPG 429
>ref|XP_004302979.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 1
[Fragaria vesca subsp. vesca]
Length = 487
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPG 408
YGRG TPAG AM+PM+LPDGR+GYVLQQPG
Sbjct: 420 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPG 449
>gb|EMJ03171.1| hypothetical protein PRUPE_ppa004785mg [Prunus persica]
Length = 491
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPG 408
YGRG TPAG AM+PM+LPDGR+GYVLQQPG
Sbjct: 423 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPG 452
>ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus] gi|449477982|ref|XP_004155183.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus]
Length = 481
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPGFPV 399
YGRG PAG MVPM+LPDGR+GYVLQQPG P+
Sbjct: 410 YGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM 442
>emb|CBI28315.3| unnamed protein product [Vitis vinifera]
Length = 434
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPG 408
YGRG TPAG AM+PM+LPDGR+GYVLQQPG
Sbjct: 359 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPG 388
>ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Vitis
vinifera]
Length = 503
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPG 408
YGRG TPAG AM+PM+LPDGR+GYVLQQPG
Sbjct: 428 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPG 457
>ref|XP_002523815.1| nucleolar phosphoprotein, putative [Ricinus communis]
gi|223536903|gb|EEF38541.1| nucleolar phosphoprotein,
putative [Ricinus communis]
Length = 489
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPG 408
YGRG TPAG AM+PM+LPDGR+GYVLQQPG
Sbjct: 414 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPG 443
>gb|AAB62861.1| similar to nucleolin protein [Arabidopsis thaliana]
gi|7267422|emb|CAB80892.1| putative protein [Arabidopsis
thaliana]
Length = 521
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPGFPVA 396
YGRG P G MVPM+LPDGR+GYVLQQPG P+A
Sbjct: 448 YGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMA 481
>ref|NP_001190648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332656543|gb|AEE81943.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPGFPVA 396
YGRG P G MVPM+LPDGR+GYVLQQPG P+A
Sbjct: 422 YGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMA 455
>ref|NP_001190647.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332656542|gb|AEE81942.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 467
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPGFPVA 396
YGRG P G MVPM+LPDGR+GYVLQQPG P+A
Sbjct: 394 YGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMA 427
>ref|NP_567192.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|79324963|ref|NP_001031566.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|13605916|gb|AAK32943.1|AF367357_1
AT4g00830/A_TM018A10_14 [Arabidopsis thaliana]
gi|21360555|gb|AAM47474.1| AT4g00830/A_TM018A10_14
[Arabidopsis thaliana] gi|110743368|dbj|BAE99571.1|
hypothetical protein [Arabidopsis thaliana]
gi|332656540|gb|AEE81940.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|332656541|gb|AEE81941.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPGFPVA 396
YGRG P G MVPM+LPDGR+GYVLQQPG P+A
Sbjct: 422 YGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMA 455
>ref|XP_002308472.2| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|550336897|gb|EEE91995.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 478
Score = 57.8 bits (138), Expect = 2e-06
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPG 408
YGRG TPAG +M+PM+LPDGR+GYVLQQPG
Sbjct: 410 YGRGPTPAGMSMMPMLLPDGRIGYVLQQPG 439
>gb|ABK24755.1| unknown [Picea sitchensis]
Length = 506
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPGFPVATHQQY 381
YGRG TP G MVPMILPDGR+GYVLQQPG V Y
Sbjct: 424 YGRGPTPEGMTMVPMILPDGRVGYVLQQPGNAVGGSAPY 462
>ref|XP_006662859.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Oryza
brachyantha]
Length = 460
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -2
Query: 497 YGRGHTPAGAAMVPMILPDGRLGYVLQQPG 408
YGRG PAG MVPM+LPDGRLGYVLQQPG
Sbjct: 399 YGRGPAPAGMRMVPMVLPDGRLGYVLQQPG 428