BLASTX nr result
ID: Zingiber24_contig00019839
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00019839
(204 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 87 2e-15
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 87 2e-15
ref|XP_002181195.1| rna polymerase C 157 kDa [Phaeodactylum tric... 85 1e-14
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 84 3e-14
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 84 3e-14
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 84 3e-14
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 83 4e-14
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 83 4e-14
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 82 6e-14
ref|XP_002291242.1| DNA directed RNA polymerase III, largest sub... 82 7e-14
ref|XP_004338971.1| ferrochelatase [Acanthamoeba castellanii str... 82 1e-13
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 80 4e-13
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 79 5e-13
gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Tri... 79 5e-13
gb|EJK66806.1| hypothetical protein THAOC_12234 [Thalassiosira o... 79 5e-13
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 79 5e-13
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s... 79 8e-13
gb|EQC33505.1| hypothetical protein SDRG_09014 [Saprolegnia dicl... 77 2e-12
gb|EMT10482.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 77 2e-12
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 77 2e-12
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/66 (68%), Positives = 55/66 (83%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIINA+K ISTPIITA L ++N+V AR+VK IEKT LG+VAK++KIVL GQ ++S
Sbjct: 1086 IKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGDVAKSIKIVLRPGQAFVS 1145
Query: 22 IKLDMD 5
IKLDMD
Sbjct: 1146 IKLDMD 1151
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/66 (68%), Positives = 55/66 (83%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIINA+K ISTPIITA L ++N+V AR+VK IEKT LG+VAK++KIVL GQ ++S
Sbjct: 1082 IKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGDVAKSIKIVLRPGQAFVS 1141
Query: 22 IKLDMD 5
IKLDMD
Sbjct: 1142 IKLDMD 1147
>ref|XP_002181195.1| rna polymerase C 157 kDa [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407181|gb|EEC47118.1| rna polymerase C 157 kDa
[Phaeodactylum tricornutum CCAP 1055/1]
Length = 1281
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/66 (68%), Positives = 53/66 (80%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
+KEIINAAK ISTPIITA LE DNN + AR+VK+ IEKTTLGEV+K +K V G YIS
Sbjct: 1006 LKEIINAAKLISTPIITAKLECDNNKVAARIVKAVIEKTTLGEVSKYMKEVYAPGSCYIS 1065
Query: 22 IKLDMD 5
++LDMD
Sbjct: 1066 VELDMD 1071
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/66 (63%), Positives = 52/66 (78%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIIN AK ISTPI+TAAL +D+NV ARMVK+ IEKT LG++AK ++IV+ S I
Sbjct: 1086 IKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIE 1145
Query: 22 IKLDMD 5
IKLDM+
Sbjct: 1146 IKLDME 1151
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/66 (68%), Positives = 53/66 (80%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIIN AK ISTPIITAALE +NNV ARMVK IE+TTLG+VAK++KIVL S I+
Sbjct: 1511 IKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIA 1570
Query: 22 IKLDMD 5
+ LDM+
Sbjct: 1571 VALDME 1576
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/66 (68%), Positives = 53/66 (80%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIIN AK ISTPIITAALE +NNV ARMVK IE+TTLG+VAK++KIVL S I+
Sbjct: 1075 IKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIA 1134
Query: 22 IKLDMD 5
+ LDM+
Sbjct: 1135 VALDME 1140
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/65 (66%), Positives = 53/65 (81%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIINAAK ISTPIITA L ++ +V+ AR+VK S+EK LGEVA+A+KIVL S QP +
Sbjct: 1009 IKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLV 1068
Query: 22 IKLDM 8
+KLDM
Sbjct: 1069 VKLDM 1073
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/65 (66%), Positives = 53/65 (81%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIINAAK ISTPIITA L ++ +V+ AR+VK S+EK LGEVA+A+KIVL S QP +
Sbjct: 1071 IKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLV 1130
Query: 22 IKLDM 8
+KLDM
Sbjct: 1131 VKLDM 1135
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 82.4 bits (202), Expect = 6e-14
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIINA+KNISTPIITA L + N+ AR+VK IEKTTLGEVAK++K VL + Q IS
Sbjct: 1089 IKEIINASKNISTPIITAVLVSGNDEKAARIVKGRIEKTTLGEVAKSIKTVLRASQAIIS 1148
Query: 22 IKLDM 8
+KLDM
Sbjct: 1149 VKLDM 1153
>ref|XP_002291242.1| DNA directed RNA polymerase III, largest subunit [Thalassiosira
pseudonana CCMP1335] gi|220973018|gb|EED91349.1| DNA
directed RNA polymerase III, largest subunit
[Thalassiosira pseudonana CCMP1335]
Length = 1422
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/66 (65%), Positives = 52/66 (78%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
+KEIINA+KNISTPIITA L D+N + AR+VK+ IEKTTLGE++ VK V SG Y+S
Sbjct: 1093 LKEIINASKNISTPIITAKLVQDDNKVGARIVKAGIEKTTLGEISIYVKEVYSSGDCYLS 1152
Query: 22 IKLDMD 5
I LDMD
Sbjct: 1153 ILLDMD 1158
>ref|XP_004338971.1| ferrochelatase [Acanthamoeba castellanii str. Neff]
gi|440795844|gb|ELR16958.1| ferrochelatase [Acanthamoeba
castellanii str. Neff]
Length = 472
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIINA+KNISTPIITA L D++ FAR+VK IEKTTLGEV++ +K V G YIS
Sbjct: 135 IKEIINASKNISTPIITAILSQDSDEKFARIVKGRIEKTTLGEVSEYIKEVYNPGGCYIS 194
Query: 22 IKLDMD 5
+KLD D
Sbjct: 195 VKLDKD 200
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 79.7 bits (195), Expect = 4e-13
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIINAAK ISTPIIT L + +V+ AR+VK ++EK LGEVA A+KIVL S QP +
Sbjct: 1084 IKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSSQPNLV 1143
Query: 22 IKLDMDL 2
+KLDM L
Sbjct: 1144 VKLDMQL 1150
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/65 (64%), Positives = 51/65 (78%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIINAAK ISTPIITA L + +V+ AR+VK S+EK LGEVA+ +KIVL S QP +
Sbjct: 1081 IKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLGEVAEDIKIVLKSSQPNLV 1140
Query: 22 IKLDM 8
+KLDM
Sbjct: 1141 VKLDM 1145
>gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Triticum urartu]
Length = 689
Score = 79.3 bits (194), Expect = 5e-13
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIINA K ISTPIIT L ++ + +FA VK SIEK LGEVA A+KIVL S QPY+
Sbjct: 376 IKEIINAVKKISTPIITTELLSEQDELFAAKVKRSIEKVVLGEVAAAIKIVLKSNQPYLV 435
Query: 22 IKLDM 8
++LDM
Sbjct: 436 VELDM 440
>gb|EJK66806.1| hypothetical protein THAOC_12234 [Thalassiosira oceanica]
Length = 1020
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/65 (61%), Positives = 50/65 (76%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
+KEIIN +KNISTPIITA L DNN + AR+VK+ IEKTTLGE++ +K V S Y+S
Sbjct: 692 LKEIINGSKNISTPIITAKLVQDNNKVGARIVKAGIEKTTLGEISICIKEVYSSSDCYLS 751
Query: 22 IKLDM 8
I+LDM
Sbjct: 752 IQLDM 756
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/67 (62%), Positives = 52/67 (77%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIINAA+ ISTPIITA L + +V+ AR+VK S+EK LGEVA A++IVL S QP +
Sbjct: 1078 IKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLKSSQPNLI 1137
Query: 22 IKLDMDL 2
+KLDM L
Sbjct: 1138 VKLDMQL 1144
>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Fragaria vesca subsp. vesca]
Length = 1390
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/65 (60%), Positives = 47/65 (72%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIIN AKNI TPIIT LE DNN + ARMV IEKT LG+VA+ ++IV+ Y+
Sbjct: 1079 IKEIINGAKNIHTPIITTVLECDNNPMIARMVAGRIEKTNLGQVAECIEIVMSPRAAYVE 1138
Query: 22 IKLDM 8
+KLDM
Sbjct: 1139 VKLDM 1143
>gb|EQC33505.1| hypothetical protein SDRG_09014 [Saprolegnia diclina VS20]
Length = 1507
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/66 (62%), Positives = 49/66 (74%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
+KEIINA KNISTPIITAAL ++ AR+VK IEKTTLGE+A +K V Q Y+S
Sbjct: 1178 LKEIINAGKNISTPIITAALVCSDDERSARIVKGCIEKTTLGEIAVHIKEVFARDQAYLS 1237
Query: 22 IKLDMD 5
+KLDMD
Sbjct: 1238 VKLDMD 1243
>gb|EMT10482.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 832
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIINA K ISTPIIT L ++ + +FA VK SIEK LGEVA A+KIVL S QP++
Sbjct: 519 IKEIINAVKKISTPIITTELLSEQDELFAAKVKCSIEKVVLGEVAAAIKIVLRSNQPHLV 578
Query: 22 IKLDM 8
++LDM
Sbjct: 579 VELDM 583
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = -3
Query: 202 IKEIINAAKNISTPIITAALENDNNVIFARMVKSSIEKTTLGEVAKAVKIVLGSGQPYIS 23
IKEIIN AK ISTPIITA LE DNNV FAR+V+ IEK +LG+VAK++K V+ S +
Sbjct: 863 IKEIINGAKKISTPIITAILECDNNVNFARIVRGRIEKISLGQVAKSIKTVMTSRVASVV 922
Query: 22 IKLDMD 5
I LDM+
Sbjct: 923 ITLDME 928