BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00019838
         (745 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo...   324   2e-86
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...   324   2e-86
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...   324   2e-86
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...   322   8e-86
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...   318   9e-85
tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family...   317   3e-84
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela...   311   1e-82
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela...   306   5e-81
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi...   303   5e-80
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s...   291   2e-76
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...   278   1e-72
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg...   278   1e-72
gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri...   278   1e-72
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              277   2e-72
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   277   2e-72
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   276   4e-72
ref|XP_002951663.1| hypothetical protein VOLCADRAFT_81566 [Volvo...   276   5e-72
ref|XP_004338971.1| ferrochelatase [Acanthamoeba castellanii str...   272   8e-71
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   271   2e-70
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   270   4e-70

>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  324 bits (831), Expect = 2e-86
 Identities = 171/252 (67%), Positives = 205/252 (81%), Gaps = 4/252 (1%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMNVTLGVPRIKEIINA+K ISTPIITA L +E++V SARIVK  +EK  LGE
Sbjct: 992  FHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGE 1051

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
            VA AIK+VLK  Q  + +KLDM  IEALHMGISA+SV+ SIL+HPKIKLK +HV  +   
Sbjct: 1052 VAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKS 1111

Query: 385  RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIRE--EKN--VHSLVVEGTN 218
            +L+I+P  +D+ K    LH+LKSMLPKV+VKG P+V+RA+I E  E+N   + L+VEGTN
Sbjct: 1112 KLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVISETGEENDKRYKLLVEGTN 1171

Query: 217  LLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLLA 38
            LL VMGT G+D  KT SNH+MEV RTLGIEA+R SII+EI++TM SHGM+ID RHMMLLA
Sbjct: 1172 LLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLA 1231

Query: 37   DLMTYKGEVLGI 2
            DLMTYKGE+LGI
Sbjct: 1232 DLMTYKGEILGI 1243


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score =  324 bits (831), Expect = 2e-86
 Identities = 171/252 (67%), Positives = 205/252 (81%), Gaps = 4/252 (1%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMNVTLGVPRIKEIINA+K ISTPIITA L +E++V SARIVK  +EK  LGE
Sbjct: 1054 FHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGE 1113

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
            VA AIK+VLK  Q  + +KLDM  IEALHMGISA+SV+ SIL+HPKIKLK +HV  +   
Sbjct: 1114 VAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKS 1173

Query: 385  RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIRE--EKN--VHSLVVEGTN 218
            +L+I+P  +D+ K    LH+LKSMLPKV+VKG P+V+RA+I E  E+N   + L+VEGTN
Sbjct: 1174 KLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVISETGEENDKRYKLLVEGTN 1233

Query: 217  LLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLLA 38
            LL VMGT G+D  KT SNH+MEV RTLGIEA+R SII+EI++TM SHGM+ID RHMMLLA
Sbjct: 1234 LLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLA 1293

Query: 37   DLMTYKGEVLGI 2
            DLMTYKGE+LGI
Sbjct: 1294 DLMTYKGEILGI 1305


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
            italica]
          Length = 1397

 Score =  324 bits (830), Expect = 2e-86
 Identities = 168/253 (66%), Positives = 203/253 (80%), Gaps = 5/253 (1%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMNVTLGVPRIKEIINA+K ISTPIIT  L + ++V SARIVK  +EK  LGE
Sbjct: 1067 FHFAGVASMNVTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGE 1126

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
            VA+AIK+VLK  Q  + +KLDM LIEALHMGISA+SV+ SIL+HPKIKLK +HV  +   
Sbjct: 1127 VASAIKIVLKSSQPNLVVKLDMQLIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDRA 1186

Query: 385  RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEK-----NVHSLVVEGT 221
            +L+I+P   D+ K Q  LHNLK+MLPKV+VKG P+V+R +I E K       ++L+VEGT
Sbjct: 1187 KLRIYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKYNLLVEGT 1246

Query: 220  NLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLL 41
            NLL VMGT G+D R T SNH+ME+  TLGIEA+R SII+EI++TM SHGM+ID+RHMMLL
Sbjct: 1247 NLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLL 1306

Query: 40   ADLMTYKGEVLGI 2
            ADLMTYKGEVLGI
Sbjct: 1307 ADLMTYKGEVLGI 1319


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
            brachyantha]
          Length = 1389

 Score =  322 bits (825), Expect = 8e-86
 Identities = 164/248 (66%), Positives = 201/248 (81%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMNVTLGVPRIKEIINA+K ISTPIITA L + ++V SAR+VK  +EK  LGE
Sbjct: 1064 FHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLGE 1123

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
            VA  IK+VLK  Q  + +KLDM  IE LHMGISA+SV+ SIL+HP+IKLK +HV  +   
Sbjct: 1124 VAEDIKIVLKSSQPNLVVKLDMQRIEDLHMGISADSVQLSILNHPRIKLKSEHVRVIDKA 1183

Query: 385  RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEKNVHSLVVEGTNLLGV 206
            +L+++P  +D+ K    LHNLKSMLPKV+VKG P+V+RA+I +  + +SL+VEGTNLL V
Sbjct: 1184 KLRVYPTAIDKSKLLYELHNLKSMLPKVIVKGIPTVERAVISQTGDKYSLLVEGTNLLAV 1243

Query: 205  MGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLLADLMT 26
            MGT G+D  KT SNH+MEV RTLGIEA+R SII+EI++TM SHGM+ID RHMMLLADLMT
Sbjct: 1244 MGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLLADLMT 1303

Query: 25   YKGEVLGI 2
            YKGE+LGI
Sbjct: 1304 YKGEILGI 1311


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score =  318 bits (816), Expect = 9e-85
 Identities = 165/253 (65%), Positives = 202/253 (79%), Gaps = 5/253 (1%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMNVTLGVPRIKEIINA++ ISTPIITA L ++++V SARIVK  +EK  LGE
Sbjct: 1061 FHFAGVASMNVTLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGE 1120

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
            VA AI++VLK  Q  + +KLDM LIE+LHMGISA+SV+ SIL+HPKIKLK +HV  +   
Sbjct: 1121 VAVAIQIVLKSSQPNLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLKSEHVRVIDRA 1180

Query: 385  RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIRE-----EKNVHSLVVEGT 221
            +L+I+P   D+ K Q  LHNLKS+LPKV+VKG P+V+R +I E     E   + L+VEGT
Sbjct: 1181 KLRIYPAGTDKRKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVKNETERYQLLVEGT 1240

Query: 220  NLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLL 41
            NLL VMGT G+D  KT SNH+ME  +TLGIEA+R SII+EI++TM SHGM+ID RHMMLL
Sbjct: 1241 NLLAVMGTPGVDATKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLL 1300

Query: 40   ADLMTYKGEVLGI 2
            ADLMTYKGE+LGI
Sbjct: 1301 ADLMTYKGEILGI 1313


>tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
          Length = 336

 Score =  317 bits (812), Expect = 3e-84
 Identities = 164/253 (64%), Positives = 199/253 (78%), Gaps = 5/253 (1%)
 Frame = -1

Query: 745 FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
           FHFAGVASMNVTLGVPRIKEIINA+K ISTPIITA L + ++V SARIVK  +EK  LGE
Sbjct: 6   FHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEKAVLGE 65

Query: 565 VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
           VA  I+ VLK     + +KLDM LIE LHMGISA+SV+ SIL+HPK+KLK +HV  +   
Sbjct: 66  VAATIQTVLKSSLPNLVVKLDMQLIETLHMGISADSVKLSILNHPKLKLKSEHVRVIDRA 125

Query: 385 RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEK-----NVHSLVVEGT 221
           +L+I+P   D++K Q  LHNLKS+LPKV+VKG P+V+R +I E K       + L+VEGT
Sbjct: 126 KLRIYPAGTDKLKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVNNATERYQLLVEGT 185

Query: 220 NLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLL 41
           NLL VMGT G+D RKT SNH+ME  +TLGIEA+R SII+EI++TM SHGM+ID RHMMLL
Sbjct: 186 NLLAVMGTPGVDARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLL 245

Query: 40  ADLMTYKGEVLGI 2
           ADLMTYKGE+LGI
Sbjct: 246 ADLMTYKGEILGI 258


>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
            gi|300146624|gb|EFJ13293.1| hypothetical protein
            SELMODRAFT_446351 [Selaginella moellendorffii]
          Length = 1393

 Score =  311 bits (798), Expect = 1e-82
 Identities = 164/252 (65%), Positives = 201/252 (79%), Gaps = 4/252 (1%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMN+TLGVPRIKEIINASK ISTPIITA L +E +V +ARIVK +IEKT LG+
Sbjct: 1065 FHFAGVASMNITLGVPRIKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGD 1124

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIK---LKEQHVHSV 395
            VA +IK+VL+PGQ  +SIKLDMD I +L + I AE+V  ++L  PKIK   LKEQHV  V
Sbjct: 1125 VAKSIKIVLRPGQAFVSIKLDMDRIYSLQLDIRAETVAEAVLKFPKIKSMKLKEQHV-KV 1183

Query: 394  GHDR-LKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEKNVHSLVVEGTN 218
              DR + +  PE DR K   ALH+L++MLPKV+VKG P+V+RA+I +EK  ++L+VEGTN
Sbjct: 1184 NDDRSISLTTPESDRKKMLFALHSLQNMLPKVIVKGIPTVERAVINQEKGKYNLLVEGTN 1243

Query: 217  LLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLLA 38
            L  VMGT G+DGR+TTSNH+ E V  LGIEA+R  II EI++TM SHGMSID RHMMLLA
Sbjct: 1244 LKAVMGTEGVDGRETTSNHIFETVEVLGIEAARNGIIKEIQYTMGSHGMSIDQRHMMLLA 1303

Query: 37   DLMTYKGEVLGI 2
            D+MTY+GE+LGI
Sbjct: 1304 DVMTYRGEILGI 1315


>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
            gi|300158014|gb|EFJ24638.1| hypothetical protein
            SELMODRAFT_442419 [Selaginella moellendorffii]
          Length = 1348

 Score =  306 bits (784), Expect = 5e-81
 Identities = 162/251 (64%), Positives = 198/251 (78%), Gaps = 4/251 (1%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMN+TLGVPRIKEIINASK ISTPIITA L +E +V +ARIVK +IEKT LG+
Sbjct: 1069 FHFAGVASMNITLGVPRIKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGD 1128

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIK---LKEQHVHSV 395
            VA +IK+VL+PGQ  +SIKLDMD I +L + I AE+V  ++L  PKIK   LKEQHV  V
Sbjct: 1129 VAKSIKIVLRPGQAFVSIKLDMDRIYSLQLDIRAETVAEAVLKFPKIKSMKLKEQHV-KV 1187

Query: 394  GHDR-LKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEKNVHSLVVEGTN 218
              DR + +  PE DR K   ALH+L++MLPKV+VKG P+V+RA+I +EK  ++L+VEGTN
Sbjct: 1188 NDDRSISLTTPESDRKKMLFALHSLQNMLPKVIVKGIPTVERAVINQEKGKYNLLVEGTN 1247

Query: 217  LLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLLA 38
            L  VMGT G+DGR+TTSNH+ E V  LGIEA+R  II EI++TM SHGMSID RHMMLLA
Sbjct: 1248 LKAVMGTEGVDGRETTSNHIFETVEVLGIEAARNGIIKEIQYTMGSHGMSIDQRHMMLLA 1307

Query: 37   DLMTYKGEVLG 5
            D+MTY+GE  G
Sbjct: 1308 DVMTYRGEFWG 1318


>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
            predicted protein [Physcomitrella patens]
          Length = 1397

 Score =  303 bits (775), Expect = 5e-80
 Identities = 156/248 (62%), Positives = 198/248 (79%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMN+TLGVPRIKEIINASKNISTPIITAVL +  +  +ARIVK +IEKTTLGE
Sbjct: 1072 FHFAGVASMNITLGVPRIKEIINASKNISTPIITAVLVSGNDEKAARIVKGRIEKTTLGE 1131

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
            VA +IK VL+  Q  IS+KLDM  I+AL + I++++V  +I+  PKIKLK  ++  V  D
Sbjct: 1132 VAKSIKTVLRASQAIISVKLDMKRIDALQLDINSDTVALAIVQTPKIKLKHVNIRIVDRD 1191

Query: 385  RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEKNVHSLVVEGTNLLGV 206
            +L + PP+ D+ K    LH+L +MLPKV+VKG PSV+RA+I +EK V++L+VEGTNL  V
Sbjct: 1192 KLIVIPPDQDKGKLYFYLHSLCNMLPKVIVKGIPSVERAVINKEKGVYNLLVEGTNLKAV 1251

Query: 205  MGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLLADLMT 26
            MG  G++G+ T SNHV+E  +TLGIEA+R  II+EI++TM SHGM+ID RHMMLLAD+MT
Sbjct: 1252 MGISGVNGKLTKSNHVIEAEQTLGIEAARNVIIDEIQYTMGSHGMTIDARHMMLLADVMT 1311

Query: 25   YKGEVLGI 2
            YKGEVLGI
Sbjct: 1312 YKGEVLGI 1319


>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Brachypodium distachyon]
          Length = 1392

 Score =  291 bits (745), Expect = 2e-76
 Identities = 157/255 (61%), Positives = 197/255 (77%), Gaps = 7/255 (2%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMNVTLGVPRIKEIINA+KNISTPIITA L + +++  A  VK  +EK  LGE
Sbjct: 1060 FHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAELLSGQDMSFAVKVKRYVEKVVLGE 1119

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEAL-HMGISAESVRHSILSHPKIKLKEQHVHSVGH 389
            VA  IK+VLK  Q  + +KLDM  IEA  +MGIS++SV+ SI+ HPKIKLK +HV  +  
Sbjct: 1120 VAAVIKIVLKSSQPNLVVKLDMQRIEAQGYMGISSDSVQQSIIRHPKIKLKSEHVRVIDG 1179

Query: 388  DRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAII----REEKNV--HSLVVE 227
             +L+I+P   D+ K Q  LH LKSMLPKV+VKG P+V+RA++    R +K +  ++L+VE
Sbjct: 1180 AKLRIYPTGTDKSKLQLELHTLKSMLPKVIVKGIPTVERAVVNPVKRPDKTLDRYNLLVE 1239

Query: 226  GTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMM 47
            GTNLL V+GT G+D +KT SNH+MEV +TLGIEA+R SII+EI++T  S+ M ID RHMM
Sbjct: 1240 GTNLLKVLGTPGVDAKKTKSNHIMEVNQTLGIEAARRSIIDEIRYTFESNNMIIDQRHMM 1299

Query: 46   LLADLMTYKGEVLGI 2
            LLADLMTYKGEVLGI
Sbjct: 1300 LLADLMTYKGEVLGI 1314


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  278 bits (711), Expect = 1e-72
 Identities = 153/255 (60%), Positives = 189/255 (74%), Gaps = 7/255 (2%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMN+TLGVPRIKEI+ ASK ISTPIITA L  + +  SARIVK +IEKT LGE
Sbjct: 1054 FHFAGVASMNITLGVPRIKEILGASKKISTPIITATLVCDNDEKSARIVKGRIEKTLLGE 1113

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSI-------LSHPKIKLKEQH 407
            VA  +K+ + P Q  I+I LDM  IEAL M I A++V  SI       +S  K+K+K   
Sbjct: 1114 VAKTVKISVTPTQASINITLDMKRIEALQMAIDAKTVADSISENLKAKVSRTKLKVKPTF 1173

Query: 406  VHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEKNVHSLVVE 227
                  D+LKI  PE+ R +   +LH L+S+LPK++VKG P+V+RA+I   K   +L+VE
Sbjct: 1174 TLP---DKLKILLPEIGRKEVLYSLHLLQSLLPKIIVKGIPTVERAVINNVKGKLNLLVE 1230

Query: 226  GTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMM 47
            GTNLL VMGT G+DGR TTSNH++EV  TLGIEA+R SII+EI++TM SHGMSIDLRHMM
Sbjct: 1231 GTNLLAVMGTPGVDGRNTTSNHIVEVEGTLGIEAARKSIIDEIQYTMKSHGMSIDLRHMM 1290

Query: 46   LLADLMTYKGEVLGI 2
            LLADLMT++G VLGI
Sbjct: 1291 LLADLMTFRGLVLGI 1305


>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
          Length = 1117

 Score =  278 bits (711), Expect = 1e-72
 Identities = 156/262 (59%), Positives = 194/262 (74%), Gaps = 14/262 (5%)
 Frame = -1

Query: 745  FHFAGVASMN------VTLGVPRIKEIINASKNISTPIITA-VLENEENVFSARIVKSKI 587
            FHFAGVASM+      VTLGVPRIKEIINA+K ISTPIITA +L  ++  F  + VK  I
Sbjct: 778  FHFAGVASMSILSVLYVTLGVPRIKEIINAAKKISTPIITAELLSGQDESFGVK-VKRCI 836

Query: 586  EKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEAL-HMGISAESVRHSILSHPKIKLKEQ 410
            EK  LGEVA AIK+VLK  Q  + +KLDM  IEA  + GI+A+SV+ SI+++PK+KLK Q
Sbjct: 837  EKVVLGEVAAAIKIVLKSSQPNLVVKLDMQRIEAQGYEGINADSVQLSIINYPKLKLKSQ 896

Query: 409  HVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEKNV----- 245
            HV  +   +L+I+P   DR K Q  LHNLKSMLPKV+VKG P+V+RA++   K       
Sbjct: 897  HVRVIDEAKLRIYPDGTDRSKLQFELHNLKSMLPKVIVKGIPTVERAVVNPVKGRDKTIE 956

Query: 244  -HSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMS 68
             ++L+VEGTNLL V+G  G+D  KT SNH+MEV +TLGIEA+R SII+EI++T  S+ M 
Sbjct: 957  RYNLLVEGTNLLAVLGAPGVDAMKTKSNHIMEVNQTLGIEAARRSIIDEIQYTFESNNMI 1016

Query: 67   IDLRHMMLLADLMTYKGEVLGI 2
            IDLRHMMLLADLMTYKGEVLGI
Sbjct: 1017 IDLRHMMLLADLMTYKGEVLGI 1038


>gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu]
          Length = 1248

 Score =  278 bits (711), Expect = 1e-72
 Identities = 156/262 (59%), Positives = 194/262 (74%), Gaps = 14/262 (5%)
 Frame = -1

Query: 745  FHFAGVASMN------VTLGVPRIKEIINASKNISTPIITA-VLENEENVFSARIVKSKI 587
            FHFAGVASM+      VTLGVPRIKEIINA+K ISTPIITA +L  ++  F  + VK  I
Sbjct: 909  FHFAGVASMSILSVLYVTLGVPRIKEIINAAKKISTPIITAELLSGQDESFGVK-VKRCI 967

Query: 586  EKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEAL-HMGISAESVRHSILSHPKIKLKEQ 410
            EK  LGEVA AIK+VLK  Q  + +KLDM  IEA  + GI+A+SV+ SI+++PK+KLK Q
Sbjct: 968  EKVVLGEVAAAIKIVLKSSQPNLVVKLDMQRIEAQGYEGINADSVQLSIINYPKLKLKSQ 1027

Query: 409  HVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEKNV----- 245
            HV  +   +L+I+P   DR K Q  LHNLKSMLPKV+VKG P+V+RA++   K       
Sbjct: 1028 HVRVIDEAKLRIYPDGTDRSKLQFELHNLKSMLPKVIVKGIPTVERAVVNPVKGRDKTIE 1087

Query: 244  -HSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMS 68
             ++L+VEGTNLL V+G  G+D  KT SNH+MEV +TLGIEA+R SII+EI++T  S+ M 
Sbjct: 1088 RYNLLVEGTNLLAVLGAPGVDAMKTKSNHIMEVNQTLGIEAARRSIIDEIQYTFESNNMI 1147

Query: 67   IDLRHMMLLADLMTYKGEVLGI 2
            IDLRHMMLLADLMTYKGEVLGI
Sbjct: 1148 IDLRHMMLLADLMTYKGEVLGI 1169


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  277 bits (709), Expect = 2e-72
 Identities = 148/249 (59%), Positives = 192/249 (77%), Gaps = 1/249 (0%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMNVTLGVPRIKEIIN +K ISTPIITA LE   NV +AR+VK +IE+TTLG+
Sbjct: 1494 FHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQ 1553

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
            VA +IK+VL      I++ LDM+ I+A  + I +  VR SIL + +IKLK+QH+  +   
Sbjct: 1554 VAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAG 1613

Query: 385  RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEKNV-HSLVVEGTNLLG 209
            +L++  P+ DR      LH LK++LP VVVKG  +V+RA+I ++  V ++L+VEGT L  
Sbjct: 1614 KLEVH-PQGDRSTIHFELHALKNLLPTVVVKGIETVERAVINKDNKVKYNLLVEGTGLQT 1672

Query: 208  VMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLLADLM 29
            VMGT G+ GR+TTSNH++EV +TLGIEA+R  IINEI++TM SHGMSID+RHMMLLADLM
Sbjct: 1673 VMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLM 1732

Query: 28   TYKGEVLGI 2
            T++GEVLGI
Sbjct: 1733 TFRGEVLGI 1741


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  277 bits (709), Expect = 2e-72
 Identities = 148/249 (59%), Positives = 192/249 (77%), Gaps = 1/249 (0%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMNVTLGVPRIKEIIN +K ISTPIITA LE   NV +AR+VK +IE+TTLG+
Sbjct: 1058 FHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQ 1117

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
            VA +IK+VL      I++ LDM+ I+A  + I +  VR SIL + +IKLK+QH+  +   
Sbjct: 1118 VAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAG 1177

Query: 385  RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEKNV-HSLVVEGTNLLG 209
            +L++  P+ DR      LH LK++LP VVVKG  +V+RA+I ++  V ++L+VEGT L  
Sbjct: 1178 KLEVH-PQGDRSTIHFELHALKNLLPTVVVKGIETVERAVINKDNKVKYNLLVEGTGLQT 1236

Query: 208  VMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLLADLM 29
            VMGT G+ GR+TTSNH++EV +TLGIEA+R  IINEI++TM SHGMSID+RHMMLLADLM
Sbjct: 1237 VMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLM 1296

Query: 28   TYKGEVLGI 2
            T++GEVLGI
Sbjct: 1297 TFRGEVLGI 1305


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  276 bits (707), Expect = 4e-72
 Identities = 144/254 (56%), Positives = 186/254 (73%), Gaps = 6/254 (2%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMNVTLGVPRIKEIIN +K ISTPI+TA L +++NV  AR+VK++IEKT LG+
Sbjct: 1069 FHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQ 1128

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
            +A  I++V+      I IKLDM+ I    + + A  V+ +IL  PK+KLK +H++ +   
Sbjct: 1129 IAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDR 1188

Query: 385  RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEKN------VHSLVVEG 224
            +L++ P + DR K    LH LK+MLP VVVKG  +V RA+I+EEK+        SL+VEG
Sbjct: 1189 KLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEG 1248

Query: 223  TNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMML 44
            T L  VMGT G+DG  T SNH++EV + LGIEA+R  II EIK+TM SHGMSID+RHMML
Sbjct: 1249 TGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMML 1308

Query: 43   LADLMTYKGEVLGI 2
            L DLMT++GEVLGI
Sbjct: 1309 LGDLMTFRGEVLGI 1322


>ref|XP_002951663.1| hypothetical protein VOLCADRAFT_81566 [Volvox carteri f. nagariensis]
            gi|300262911|gb|EFJ47114.1| hypothetical protein
            VOLCADRAFT_81566 [Volvox carteri f. nagariensis]
          Length = 1365

 Score =  276 bits (706), Expect = 5e-72
 Identities = 147/273 (53%), Positives = 196/273 (71%), Gaps = 25/273 (9%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMNVTLGVPRIKEIINA+KNISTPI+   L  + +V +AR+VK ++EKTTLG+
Sbjct: 994  FHFAGVASMNVTLGVPRIKEIINAAKNISTPIMKVALAVDGDVKAARLVKGRLEKTTLGQ 1053

Query: 565  VATAIKVVLKPG------------------------QQCISIKLDMDLIEALHMGISAES 458
            VA  IK+VLKPG                        +  ISI+LDM  I+AL + I   +
Sbjct: 1054 VARHIKIVLKPGRGGGDAMTMPGSGGAYGGGPRLHGEAVISIRLDMASIDALQLDIDGHT 1113

Query: 457  VRHSILSHPKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSV 278
            V++SIL+HPK+KLKEQHV +V  D++ ++P +  R      L  L   LP V+V G P+V
Sbjct: 1114 VKYSILAHPKLKLKEQHVRAVAQDKVLVYPQDASRQGLLFCLEGLLGKLPGVIVMGIPTV 1173

Query: 277  DRAIIREEK-NVHSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINE 101
            +RA+I ++K + +SL+VEGTN+  VMGTLG+ G +TT+NHV E+ + +GIEA+R++I++E
Sbjct: 1174 ERAVITKDKGDKYSLLVEGTNVQAVMGTLGVLGTQTTTNHVAEIEKFMGIEAARSAIMSE 1233

Query: 100  IKFTMNSHGMSIDLRHMMLLADLMTYKGEVLGI 2
            IK+TM SHGMSID RH+MLLAD M+YKGEVLGI
Sbjct: 1234 IKYTMGSHGMSIDDRHIMLLADCMSYKGEVLGI 1266


>ref|XP_004338971.1| ferrochelatase [Acanthamoeba castellanii str. Neff]
           gi|440795844|gb|ELR16958.1| ferrochelatase [Acanthamoeba
           castellanii str. Neff]
          Length = 472

 Score =  272 bits (696), Expect = 8e-71
 Identities = 140/252 (55%), Positives = 190/252 (75%), Gaps = 4/252 (1%)
 Frame = -1

Query: 745 FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
           FHFAGVASMN+TLGVPRIKEIINASKNISTPIITA+L  + +   ARIVK +IEKTTLGE
Sbjct: 118 FHFAGVASMNITLGVPRIKEIINASKNISTPIITAILSQDSDEKFARIVKGRIEKTTLGE 177

Query: 565 VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
           V+  IK V  PG   IS+KLD D I AL + I++ SV  +IL+ P+ K+K +HV + G  
Sbjct: 178 VSEYIKEVYNPGGCYISVKLDKDAIRALQLEINSASVMRAILNSPRTKIKAEHVSTSGEW 237

Query: 385 RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEKN----VHSLVVEGTN 218
           +L++ P E  R +   +L  +K++LP V+++G P+V RA+I ++ +     ++L+VEG N
Sbjct: 238 KLRVMPIERSREQMYFSLQTVKNLLPSVLIRGIPTVSRAVINKKGSGADARYNLLVEGYN 297

Query: 217 LLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLLA 38
           LL VM T G+ G +TTSNH++EV+ TLGIEA+R +I+NEI++TM  HGM+ID RH+MLLA
Sbjct: 298 LLSVMATPGVVGSRTTSNHIIEVMTTLGIEAARVTIMNEIQYTMKEHGMNIDTRHVMLLA 357

Query: 37  DLMTYKGEVLGI 2
           DLM ++GE+LGI
Sbjct: 358 DLMCFRGEILGI 369


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score =  271 bits (693), Expect = 2e-70
 Identities = 146/258 (56%), Positives = 188/258 (72%), Gaps = 10/258 (3%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMNVTLGVPRIKEIINA+K I+TPIITA L +  N+ +AR++K++IEKT LG+
Sbjct: 1056 FHFAGVASMNVTLGVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIKARIEKTLLGQ 1115

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
            VA ++K+VL      I+I LDM+ I+   + I A +V+ SIL   KIKLKE  +  +   
Sbjct: 1116 VAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPR 1175

Query: 385  RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEK----------NVHSL 236
            +L++F P+ ++ K    LH LK+ LP VVVKG  +V RA++ +E+            + L
Sbjct: 1176 KLEVF-PQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYEL 1234

Query: 235  VVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLR 56
            +VEGT LL VMG  G+DGR T SNH+MEV  TLGIEA+R SII+EI +TM+SHGM+IDLR
Sbjct: 1235 LVEGTGLLAVMGIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMSSHGMTIDLR 1294

Query: 55   HMMLLADLMTYKGEVLGI 2
            HMMLLADLMTYKGEVLGI
Sbjct: 1295 HMMLLADLMTYKGEVLGI 1312


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  270 bits (690), Expect = 4e-70
 Identities = 145/258 (56%), Positives = 187/258 (72%), Gaps = 10/258 (3%)
 Frame = -1

Query: 745  FHFAGVASMNVTLGVPRIKEIINASKNISTPIITAVLENEENVFSARIVKSKIEKTTLGE 566
            FHFAGVASMNVTLGVPRIKEIINA+K I+TPIIT  L +  N+ +AR++K++IEKT LG+
Sbjct: 1056 FHFAGVASMNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQ 1115

Query: 565  VATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHVHSVGHD 386
            VA ++K+VL      I+I LDM+ I+   + I A +V+ SIL   KIKLKE  +  +   
Sbjct: 1116 VAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPR 1175

Query: 385  RLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREEK----------NVHSL 236
            +L++F P+ ++ K    LH LK+ LP VVVKG  +V RA++ +E+            + L
Sbjct: 1176 KLEVF-PQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYEL 1234

Query: 235  VVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLR 56
            +VEGT LL VMG  G+DGR T SNH+MEV  TLGIEA+R SII+EI +TM+SHGM+IDLR
Sbjct: 1235 LVEGTGLLAVMGIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMSSHGMTIDLR 1294

Query: 55   HMMLLADLMTYKGEVLGI 2
            HMMLLADLMTYKGEVLGI
Sbjct: 1295 HMMLLADLMTYKGEVLGI 1312