BLASTX nr result
ID: Zingiber24_contig00019706
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00019706
(942 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC13620.1| RING-H2 zinc finger protein RHA1a [Morus notabilis] 86 2e-14
gb|EOY30109.1| RING/U-box superfamily protein, putative [Theobro... 83 1e-13
ref|XP_002309447.1| zinc finger family protein [Populus trichoca... 83 1e-13
ref|XP_002324208.1| predicted protein [Populus trichocarpa] 82 4e-13
ref|XP_006474542.1| PREDICTED: RING-H2 finger protein ATL3-like ... 81 7e-13
ref|XP_006452930.1| hypothetical protein CICLE_v10009663mg [Citr... 81 7e-13
ref|XP_006851037.1| hypothetical protein AMTR_s00025p00229930 [A... 79 3e-12
gb|EMJ03760.1| hypothetical protein PRUPE_ppa011348mg [Prunus pe... 78 4e-12
ref|XP_002877274.1| zinc finger family protein [Arabidopsis lyra... 78 4e-12
ref|NP_001235362.1| uncharacterized protein LOC100306203 [Glycin... 78 4e-12
ref|XP_006652684.1| PREDICTED: RING-H2 finger protein ATL11-like... 78 6e-12
ref|XP_002516178.1| RING-H2 finger protein ATL3J, putative [Rici... 77 1e-11
ref|NP_189929.1| RING/U-box domain-containing protein [Arabidops... 77 1e-11
gb|EAZ31735.1| hypothetical protein OsJ_15887 [Oryza sativa Japo... 76 2e-11
gb|EAY95267.1| hypothetical protein OsI_17090 [Oryza sativa Indi... 76 2e-11
ref|NP_001053644.1| Os04g0579200 [Oryza sativa Japonica Group] g... 76 2e-11
gb|ESW26519.1| hypothetical protein PHAVU_003G125900g [Phaseolus... 75 3e-11
ref|XP_006400653.1| hypothetical protein EUTSA_v10014811mg [Eutr... 75 3e-11
ref|XP_006293128.1| hypothetical protein CARUB_v10019434mg [Caps... 75 3e-11
ref|NP_001146854.1| RING zinc finger protein-like [Zea mays] gi|... 75 4e-11
>gb|EXC13620.1| RING-H2 zinc finger protein RHA1a [Morus notabilis]
Length = 176
Score = 85.9 bits (211), Expect = 2e-14
Identities = 43/84 (51%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 TCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHDEHLSCPLCR----TALXXXXXXX 666
TCAVCL+ + D V EL NC HVFH+ CLDRWLDHD H +CPLCR T
Sbjct: 93 TCAVCLNRLRTNDEVRELRNCCHVFHRECLDRWLDHDHHKTCPLCRAPFLTPSQSQSLSL 152
Query: 667 XXXXXXXXXXXERLLYFFGDDHLL 738
ERLLY FGDD LL
Sbjct: 153 AAARSQPSWAVERLLYLFGDDLLL 176
>gb|EOY30109.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 181
Score = 83.2 bits (204), Expect = 1e-13
Identities = 44/112 (39%), Positives = 55/112 (49%), Gaps = 16/112 (14%)
Frame = +1
Query: 448 LVETAEEVRSAXXXXXXTCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHDE----- 612
++ T E+ + TCAVCLS++ D V EL NC HVFHK C+DRW+D+D+
Sbjct: 69 VLTTFEDAKERVPWVSDTCAVCLSQLKEGDEVRELRNCCHVFHKDCIDRWVDYDQDHDQD 128
Query: 613 -----------HLSCPLCRTALXXXXXXXXXXXXXXXXXXERLLYFFGDDHL 735
H +CPLCRT L ERLLY FGDD L
Sbjct: 129 YDHDYNEHEHNHKTCPLCRTPLLTSSQSLGWPKNEPSWAVERLLYLFGDDLL 180
>ref|XP_002309447.1| zinc finger family protein [Populus trichocarpa]
gi|118483893|gb|ABK93837.1| unknown [Populus
trichocarpa] gi|222855423|gb|EEE92970.1| zinc finger
family protein [Populus trichocarpa]
Length = 168
Score = 83.2 bits (204), Expect = 1e-13
Identities = 41/99 (41%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Frame = +1
Query: 448 LVETAEEVRSAXXXXXXTCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHD-----E 612
++ T +V TCAVCLS++ +D V EL NC HVFH+ C+DRW+DHD
Sbjct: 67 ILTTFGDVTERMPGVCDTCAVCLSQLRDQDEVRELRNCCHVFHRDCIDRWVDHDHEHDEN 126
Query: 613 HLSCPLCRTALXXXXXXXXXXXXXXXXXXERLLYFFGDD 729
H +CPLCR L ER+LY FGDD
Sbjct: 127 HNTCPLCRAPLLTTSQSLARTRAEPSWAVERILYLFGDD 165
>ref|XP_002324208.1| predicted protein [Populus trichocarpa]
Length = 174
Score = 81.6 bits (200), Expect = 4e-13
Identities = 40/88 (45%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Frame = +1
Query: 499 TCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHD-----------EHLSCPLCRTAL 645
TCAVCLS++ +D V EL NC HVFHK C+DRW+DHD H +CPLCR L
Sbjct: 84 TCAVCLSQLRDQDEVRELRNCGHVFHKECIDRWVDHDHDHDHDHDHDENHNTCPLCRAPL 143
Query: 646 XXXXXXXXXXXXXXXXXXERLLYFFGDD 729
ER+LY FGDD
Sbjct: 144 PTTSRSLAWTRTEPSWAVERILYLFGDD 171
>ref|XP_006474542.1| PREDICTED: RING-H2 finger protein ATL3-like [Citrus sinensis]
Length = 179
Score = 80.9 bits (198), Expect = 7e-13
Identities = 38/80 (47%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +1
Query: 499 TCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHDEHLSCPLCRTAL---XXXXXXXX 669
TCAVCL+ M D+V EL NC HVFH+ C+DRW+D+D H +CPLCR L
Sbjct: 97 TCAVCLNHMEEDDLVRELRNCCHVFHRECIDRWVDYDHHKTCPLCRAPLLTYLQSKILKN 156
Query: 670 XXXXXXXXXXERLLYFFGDD 729
ER+LY FGDD
Sbjct: 157 WPKNERNWAVERILYIFGDD 176
>ref|XP_006452930.1| hypothetical protein CICLE_v10009663mg [Citrus clementina]
gi|557556156|gb|ESR66170.1| hypothetical protein
CICLE_v10009663mg [Citrus clementina]
Length = 178
Score = 80.9 bits (198), Expect = 7e-13
Identities = 38/80 (47%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +1
Query: 499 TCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHDEHLSCPLCRTAL---XXXXXXXX 669
TCAVCL+ M D+V EL NC HVFH+ C+DRW+D+D H +CPLCR L
Sbjct: 96 TCAVCLNHMEEDDLVRELRNCCHVFHRECIDRWVDYDHHKTCPLCRAPLLTYLQSKSLNN 155
Query: 670 XXXXXXXXXXERLLYFFGDD 729
ER+LY FGDD
Sbjct: 156 WPKNEPNWAVERILYIFGDD 175
>ref|XP_006851037.1| hypothetical protein AMTR_s00025p00229930 [Amborella trichopoda]
gi|548854708|gb|ERN12618.1| hypothetical protein
AMTR_s00025p00229930 [Amborella trichopoda]
Length = 171
Score = 79.0 bits (193), Expect = 3e-12
Identities = 36/80 (45%), Positives = 47/80 (58%)
Frame = +1
Query: 499 TCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHDEHLSCPLCRTALXXXXXXXXXXX 678
TCAVCL+EM + +++ EL C H+FHK CLDRW+D D +CPLCRT L
Sbjct: 90 TCAVCLNEMRSEEIIRELIMCSHIFHKECLDRWVDSDRK-TCPLCRTPLIVAGMSAPEYF 148
Query: 679 XXXXXXXERLLYFFGDDHLL 738
E+L+Y F DD +L
Sbjct: 149 AGHNWAVEKLIYLFADDLIL 168
>gb|EMJ03760.1| hypothetical protein PRUPE_ppa011348mg [Prunus persica]
Length = 214
Score = 78.2 bits (191), Expect = 4e-12
Identities = 42/90 (46%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Frame = +1
Query: 499 TCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDH------DEHLSCPLCRTAL----X 648
TCAVCLS++ D V EL NC HVFH C+DRWL++ D H +CPLCRT L
Sbjct: 125 TCAVCLSQLEMEDQVRELRNCSHVFHTECIDRWLEYHDHHHDDNHRTCPLCRTPLLTSSQ 184
Query: 649 XXXXXXXXXXXXXXXXXERLLYFFGDDHLL 738
ERLLY FGDD LL
Sbjct: 185 IQSLSWDHRSSQPSWAVERLLYLFGDDLLL 214
>ref|XP_002877274.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297323112|gb|EFH53533.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 78.2 bits (191), Expect = 4e-12
Identities = 45/107 (42%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Frame = +1
Query: 442 EDLVETA--EEVRSAXXXXXXTCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWL----- 600
E L TA + V + TCAVCL ++ D + EL NC HVFH+ C+DRWL
Sbjct: 61 ESLAVTAFRDAVERSPATINDTCAVCLGDLEDDDEIRELRNCNHVFHRDCIDRWLEYECR 120
Query: 601 --DHDEHLSCPLCRTALXXXXXXXXXXXXXXXXXXERLLYFFGDDHL 735
D D H +CPLCRT L ERLLY FGDD L
Sbjct: 121 GGDEDNHRTCPLCRTPL-LPSFSDCSTVNQPSWAVERLLYLFGDDLL 166
>ref|NP_001235362.1| uncharacterized protein LOC100306203 [Glycine max]
gi|255627855|gb|ACU14272.1| unknown [Glycine max]
Length = 172
Score = 78.2 bits (191), Expect = 4e-12
Identities = 41/103 (39%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Frame = +1
Query: 448 LVETAEEVRSAXXXXXXTCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHDEH---L 618
L+ T E++ TCAVCLS+++ D V EL NC HVFH+ C+DRWL+H+
Sbjct: 68 LLTTFGEIKERLPETEETCAVCLSQLSVEDEVRELMNCYHVFHRECIDRWLEHEHENHSA 127
Query: 619 SCPLCRTAL----XXXXXXXXXXXXXXXXXXERLLYFFGDDHL 735
+CP+CR L ERLLY FGDD L
Sbjct: 128 TCPICRAPLLSSSCHHSSATCLPPPQPSWAVERLLYLFGDDLL 170
>ref|XP_006652684.1| PREDICTED: RING-H2 finger protein ATL11-like, partial [Oryza
brachyantha]
Length = 183
Score = 77.8 bits (190), Expect = 6e-12
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +1
Query: 502 CAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHDEHLSCPLCRTAL 645
CAVCLS + D V LTNCRHVFH+GCLDRW++HD+ +CPLCR L
Sbjct: 83 CAVCLSGIGGGDEVRRLTNCRHVFHRGCLDRWMEHDDQRTCPLCRAPL 130
>ref|XP_002516178.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
gi|223544664|gb|EEF46180.1| RING-H2 finger protein
ATL3J, putative [Ricinus communis]
Length = 177
Score = 77.0 bits (188), Expect = 1e-11
Identities = 39/85 (45%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Frame = +1
Query: 499 TCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDH-----DEHLSCPLCRTAL---XXX 654
TCAVCL +++ D V EL NC HVFHK C+DRW+DH D H +CPLCR L
Sbjct: 88 TCAVCLGQLSELDEVRELRNCCHVFHKECIDRWVDHDHDHDDNHKTCPLCRAPLLTASQS 147
Query: 655 XXXXXXXXXXXXXXXERLLYFFGDD 729
ER+LY FGDD
Sbjct: 148 LAWINNNKCEPSWAVERILYLFGDD 172
>ref|NP_189929.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|7263618|emb|CAB81584.1| putative protein [Arabidopsis
thaliana] gi|51968876|dbj|BAD43130.1| putative protein
[Arabidopsis thaliana] gi|332644271|gb|AEE77792.1|
RING/U-box domain-containing protein [Arabidopsis
thaliana]
Length = 167
Score = 76.6 bits (187), Expect = 1e-11
Identities = 39/85 (45%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Frame = +1
Query: 502 CAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDH-------DEHLSCPLCRTALXXXXX 660
CAVCL ++ D + EL NC HVFH+ C+DRWLD+ D H +CPLCRT L
Sbjct: 83 CAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRTCPLCRTPL-LPSF 141
Query: 661 XXXXXXXXXXXXXERLLYFFGDDHL 735
ERLLY FGDD L
Sbjct: 142 TDYSTVTQTSWAVERLLYLFGDDLL 166
>gb|EAZ31735.1| hypothetical protein OsJ_15887 [Oryza sativa Japonica Group]
Length = 212
Score = 76.3 bits (186), Expect = 2e-11
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +1
Query: 502 CAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHDEHLSCPLCRTAL 645
CAVCLS + D V L+NCRHVFH+GCLDRW++HD+ +CPLCR L
Sbjct: 112 CAVCLSGIGGGDEVRRLSNCRHVFHRGCLDRWMEHDDQRTCPLCRAPL 159
>gb|EAY95267.1| hypothetical protein OsI_17090 [Oryza sativa Indica Group]
Length = 212
Score = 76.3 bits (186), Expect = 2e-11
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +1
Query: 502 CAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHDEHLSCPLCRTAL 645
CAVCLS + D V L+NCRHVFH+GCLDRW++HD+ +CPLCR L
Sbjct: 112 CAVCLSGIGGGDEVRRLSNCRHVFHRGCLDRWMEHDDQRTCPLCRAPL 159
>ref|NP_001053644.1| Os04g0579200 [Oryza sativa Japonica Group]
gi|32488512|emb|CAE03264.1| OSJNBa0011J08.19 [Oryza
sativa Japonica Group] gi|113565215|dbj|BAF15558.1|
Os04g0579200 [Oryza sativa Japonica Group]
gi|215713537|dbj|BAG94674.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 212
Score = 76.3 bits (186), Expect = 2e-11
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +1
Query: 502 CAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHDEHLSCPLCRTAL 645
CAVCLS + D V L+NCRHVFH+GCLDRW++HD+ +CPLCR L
Sbjct: 112 CAVCLSGIGGGDEVRRLSNCRHVFHRGCLDRWMEHDDQRTCPLCRAPL 159
>gb|ESW26519.1| hypothetical protein PHAVU_003G125900g [Phaseolus vulgaris]
Length = 170
Score = 75.5 bits (184), Expect = 3e-11
Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Frame = +1
Query: 448 LVETAEEVRSAXXXXXXTCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDHD---EHL 618
++ T E++ TCAVCL+++ D V EL NC HVFH+ C+DRWL+H+ +
Sbjct: 66 VLTTFGEIKERLPHTEDTCAVCLNQLEVEDEVRELMNCYHVFHRECIDRWLEHEHENHNP 125
Query: 619 SCPLCRTAL----XXXXXXXXXXXXXXXXXXERLLYFFGDDHL 735
+CPLCR L ERLLY FGDD L
Sbjct: 126 TCPLCRAPLLSSCCHHNSATSQPPPQPSWAVERLLYLFGDDLL 168
>ref|XP_006400653.1| hypothetical protein EUTSA_v10014811mg [Eutrema salsugineum]
gi|557101743|gb|ESQ42106.1| hypothetical protein
EUTSA_v10014811mg [Eutrema salsugineum]
Length = 179
Score = 75.5 bits (184), Expect = 3e-11
Identities = 45/115 (39%), Positives = 55/115 (47%), Gaps = 15/115 (13%)
Frame = +1
Query: 439 YEDLVETAEEVRSAXXXXXXTCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDH---- 606
+ D E + E+ S TCAVCL ++ D V EL NC HVFH+ C+DRWLD+
Sbjct: 71 FRDAAERSPELVS------DTCAVCLGDLEDGDEVRELRNCSHVFHRECIDRWLDYECCG 124
Query: 607 --------DEHLSCPLCRT---ALXXXXXXXXXXXXXXXXXXERLLYFFGDDHLL 738
D H +CPLCRT A ERLLY FGDD L+
Sbjct: 125 GDDNDGEEDNHRTCPLCRTPLLAANTTSCGDWPAKNEPSWAVERLLYLFGDDLLV 179
>ref|XP_006293128.1| hypothetical protein CARUB_v10019434mg [Capsella rubella]
gi|482561835|gb|EOA26026.1| hypothetical protein
CARUB_v10019434mg [Capsella rubella]
Length = 174
Score = 75.5 bits (184), Expect = 3e-11
Identities = 39/91 (42%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Frame = +1
Query: 499 TCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDH------------DEHLSCPLCRTA 642
TCAVCL ++ D + EL NC HVFH+ C+DRW+D+ D H +CPLCRT
Sbjct: 84 TCAVCLGDLEDNDEIRELRNCTHVFHRDCIDRWVDYVCRGGGCGGDDDDNHRTCPLCRTP 143
Query: 643 LXXXXXXXXXXXXXXXXXXERLLYFFGDDHL 735
L ERLLY FGDD L
Sbjct: 144 L-LPSFSDCSSVNQPSWAVERLLYLFGDDLL 173
>ref|NP_001146854.1| RING zinc finger protein-like [Zea mays]
gi|195604260|gb|ACG23960.1| RING zinc finger
protein-like [Zea mays]
Length = 173
Score = 75.1 bits (183), Expect = 4e-11
Identities = 41/95 (43%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Frame = +1
Query: 499 TCAVCLSEMAARDVVWELTNCRHVFHKGCLDRWLDH------------DEHLSCPLCRT- 639
TCAVCL ++ D V EL NC HVFH+ C+DRWLD+ D H +CPLCRT
Sbjct: 79 TCAVCLGDLEDGDEVRELRNCSHVFHRECIDRWLDYECCGGDDNDGEEDNHRTCPLCRTP 138
Query: 640 --ALXXXXXXXXXXXXXXXXXXERLLYFFGDDHLL 738
A ERLLY FGDD L+
Sbjct: 139 LLAANTSSCADWPVKNEPSWAVERLLYLFGDDLLV 173