BLASTX nr result
ID: Zingiber24_contig00019541
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00019541
(920 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volv... 129 2e-36
gb|EOY03943.1| Geranylgeranyl pyrophosphate synthase 1 [Theobrom... 124 3e-35
ref|XP_006430612.1| hypothetical protein CICLE_v10013734mg [Citr... 127 5e-35
ref|XP_006482126.1| PREDICTED: heterodimeric geranylgeranyl pyro... 127 6e-35
gb|AEZ55682.1| geranylgeranyl diphosphate synthase 2 [Salvia mil... 125 8e-35
ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, puta... 125 1e-34
dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton su... 122 2e-34
ref|XP_004967872.1| PREDICTED: geranylgeranyl pyrophosphate synt... 126 3e-34
ref|XP_006853583.1| hypothetical protein AMTR_s00566p00010050 [A... 122 4e-34
ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, puta... 121 4e-34
gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum ... 126 4e-34
ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synt... 111 5e-34
gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha cur... 124 7e-34
sp|Q94ID7.1|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophospha... 120 7e-34
dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasi... 120 7e-34
gb|AGU91431.1| geranylgeranyl pyrophosphate synthase [Chrysanthe... 120 7e-34
dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanth... 120 7e-34
ref|XP_002305196.2| hypothetical protein POPTR_0004s08970g [Popu... 122 1e-33
ref|XP_006300178.1| hypothetical protein CARUB_v10016413mg [Caps... 122 1e-33
gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aesti... 122 2e-33
>ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis] gi|300261227|gb|EFJ45441.1| hypothetical
protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
Length = 312
Score = 129 bits (325), Expect(2) = 2e-36
Identities = 78/192 (40%), Positives = 95/192 (49%), Gaps = 1/192 (0%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH +GE A+L+GD ELGRATGAEGL+AGQ+
Sbjct: 116 PTNHKVYGEDIAILSGDALLTYAFEHIARATKGVSAERVLRVIMELGRATGAEGLVAGQV 175
Query: 521 MDIXXXXXXXXXXXXXXIHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXFQ 700
+DI IHLHKTA L+EA+ CG I+ FQ
Sbjct: 176 VDIQSEDKEVGLDVLKYIHLHKTAALLEASVVCGAIVGGADEATIEKLRKYSRNIGLAFQ 235
Query: 701 VVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDRN 880
VVDDILDVT+TTE+LGKTA KD A KTTYPK +A ++L GFD+
Sbjct: 236 VVDDILDVTQTTEQLGKTAAKDLAVNKTTYPKLLGLEKSREVAEQLINEAIQQLDGFDKV 295
Query: 881 RARPLRHLARYI 916
+A PL LA+YI
Sbjct: 296 KAAPLVALAKYI 307
Score = 50.4 bits (119), Expect(2) = 2e-36
Identities = 27/62 (43%), Positives = 31/62 (50%)
Frame = +1
Query: 136 ADLFDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELV 315
A FD QYM ++ MRYSLL+ GKRVRP L LAACEL+
Sbjct: 17 AGSFDFNQYMVDRAKLVNKALDEAVPQKYPDTLYESMRYSLLAGGKRVRPALCLAACELI 76
Query: 316 GG 321
GG
Sbjct: 77 GG 78
>gb|EOY03943.1| Geranylgeranyl pyrophosphate synthase 1 [Theobroma cacao]
Length = 361
Score = 124 bits (311), Expect(2) = 3e-35
Identities = 77/193 (39%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX--ELGRATGAEGLLAGQ 517
P NH FGE A+LAGD ELG A G+EGL+ GQ
Sbjct: 164 PTNHKVFGEETAILAGDALLSLAFEHLASKTTENISPDRVVRAIAELGSAVGSEGLVGGQ 223
Query: 518 IMDIXXXXXXXXXXXXXXIHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXF 697
I+D+ IHLHKTAKL+EA+ CG I+ F
Sbjct: 224 IVDLASEGKEISLNELEYIHLHKTAKLLEASVVCGAIIGGGNDGDVVRVRNYARSIGLLF 283
Query: 698 QVVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDR 877
QVVDDILDVT+++EELGKTAGKD K TYPK +A EEL FD
Sbjct: 284 QVVDDILDVTKSSEELGKTAGKDLVSNKATYPKLIGLDNAKKFAGELMTQAVEELAYFDP 343
Query: 878 NRARPLRHLARYI 916
RA PL HLA++I
Sbjct: 344 ARAAPLYHLAKFI 356
Score = 52.0 bits (123), Expect(2) = 3e-35
Identities = 27/65 (41%), Positives = 35/65 (53%)
Frame = +1
Query: 127 ADEADLFDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAAC 306
+D F+ ++YMA+K MRYSLL+ GKRVRP+L +AAC
Sbjct: 62 SDPLPAFNFEEYMADKGQRVNKALIKAVPLKHPMQIHEAMRYSLLAGGKRVRPILCIAAC 121
Query: 307 ELVGG 321
ELVGG
Sbjct: 122 ELVGG 126
>ref|XP_006430612.1| hypothetical protein CICLE_v10013734mg [Citrus clementina]
gi|557532669|gb|ESR43852.1| hypothetical protein
CICLE_v10013734mg [Citrus clementina]
Length = 364
Score = 127 bits (319), Expect(2) = 5e-35
Identities = 80/193 (41%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH FGE A+LAGD ELG A G+EGL+AG+I
Sbjct: 168 PTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEI 227
Query: 521 MDIXXXXXXXXXXXXXXIHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXFQ 700
MDI IH+HKTAKL+EAA CGVI+ FQ
Sbjct: 228 MDIDSEGKDVSLNELENIHVHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQ 287
Query: 701 VVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDRN 880
VVDDILDVT++++ELGKTAGKD K TYPK +A EEL F+
Sbjct: 288 VVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAGDLLAQATEELAYFEVA 347
Query: 881 RARPLRHLARYIA 919
RA PL HLA YIA
Sbjct: 348 RAAPLYHLAYYIA 360
Score = 48.1 bits (113), Expect(2) = 5e-35
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = +1
Query: 142 LFDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
+F ++YM K MRYSLL+ GKRVRPVL +A+CELVGG
Sbjct: 71 IFQFEEYMTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG 130
>ref|XP_006482126.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 1, chloroplastic-like [Citrus sinensis]
Length = 364
Score = 127 bits (318), Expect(2) = 6e-35
Identities = 80/193 (41%), Positives = 92/193 (47%), Gaps = 1/193 (0%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH FGE A+LAGD ELG A G+EGL+AG+I
Sbjct: 168 PTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEI 227
Query: 521 MDIXXXXXXXXXXXXXXIHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXFQ 700
MDI IHLHKTAKL+EAA CG I+ FQ
Sbjct: 228 MDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGAIIGGGNMIEVERVRKYARCIGLLFQ 287
Query: 701 VVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDRN 880
VVDDILDVT++++ELGKTAGKD K TYPK +A EEL F+
Sbjct: 288 VVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVA 347
Query: 881 RARPLRHLARYIA 919
RA PL HLA YIA
Sbjct: 348 RAAPLYHLAYYIA 360
Score = 48.1 bits (113), Expect(2) = 6e-35
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = +1
Query: 142 LFDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
+F ++YM K MRYSLL+ GKRVRPVL +A+CELVGG
Sbjct: 71 IFQFEEYMTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG 130
>gb|AEZ55682.1| geranylgeranyl diphosphate synthase 2 [Salvia miltiorrhiza]
Length = 346
Score = 125 bits (314), Expect(2) = 8e-35
Identities = 79/193 (40%), Positives = 92/193 (47%), Gaps = 1/193 (0%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P H FGE AVLAGD ELG A G+EGL+AGQI
Sbjct: 150 PTCHKEFGEETAVLAGDALLALAFEHVAAKTRNVDERRVVQAIVELGSAVGSEGLVAGQI 209
Query: 521 MDIXXXXXXXXXXXXXXIHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXFQ 700
+D+ IH+HKT+KL+EAA CG IM FQ
Sbjct: 210 VDLSSEGKLLSLGELEYIHVHKTSKLLEAAVVCGAIMGGGGGAQVEALRKYARCVGLLFQ 269
Query: 701 VVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDRN 880
VVDDILDVT+T+EELGKTAGKD K TYP+ A +EL FD +
Sbjct: 270 VVDDILDVTKTSEELGKTAGKDLVTDKATYPRLMGLRKAKDFAADLAAMAVQELSYFDPS 329
Query: 881 RARPLRHLARYIA 919
RA PL HLA+YIA
Sbjct: 330 RAAPLYHLAQYIA 342
Score = 49.3 bits (116), Expect(2) = 8e-35
Identities = 27/59 (45%), Positives = 31/59 (52%)
Frame = +1
Query: 145 FDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
F ++YMA K MRYSLL+ GKRVRPVL LA+CELVGG
Sbjct: 54 FKFEEYMASKAKKVNTALDDAVPLQNPLKIHQAMRYSLLAGGKRVRPVLCLASCELVGG 112
>ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223529232|gb|EEF31206.1| geranyl geranyl
pyrophosphate synthase, putative [Ricinus communis]
Length = 372
Score = 125 bits (313), Expect(2) = 1e-34
Identities = 77/193 (39%), Positives = 91/193 (47%), Gaps = 1/193 (0%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH FGE A+LAGD ELG A G+EGL+AGQI
Sbjct: 176 PTNHKMFGEETAILAGDALLSFSFEHVARSTKNVSPDRVVRAIAELGSAVGSEGLVAGQI 235
Query: 521 MDIXXXXXXXXXXXXXXIHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXFQ 700
+DI IH+HKTAKL+EA+ CG I+ FQ
Sbjct: 236 VDIDSEGKDVSVSDLEYIHIHKTAKLLEASVVCGAILGGADDESVERVRKYARCIGLLFQ 295
Query: 701 VVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDRN 880
VVDDILDVT+++EELGKTAGKD K TYPK +A +EL FD
Sbjct: 296 VVDDILDVTKSSEELGKTAGKDLITDKATYPKLMGIDEARKLAAKLVDQANQELAYFDSA 355
Query: 881 RARPLRHLARYIA 919
+A PL H A YIA
Sbjct: 356 KAAPLYHFANYIA 368
Score = 49.3 bits (116), Expect(2) = 1e-34
Identities = 27/59 (45%), Positives = 31/59 (52%)
Frame = +1
Query: 145 FDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
F ++YMA K MRYSLL+ GKRVRPVL +AACELVGG
Sbjct: 80 FPFEEYMATKAKHVNKALDEAIPLQNPVKIHDAMRYSLLAGGKRVRPVLCIAACELVGG 138
>dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
Length = 368
Score = 122 bits (305), Expect(2) = 2e-34
Identities = 77/194 (39%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH+ FGE AVLAGD EL +A GAEGL+AGQ+
Sbjct: 171 PTNHIVFGENVAVLAGDALLAFAFEHIAVSTLNVSPVRIVRGVGELAKAIGAEGLVAGQV 230
Query: 521 MDIXXXXXXXXXXXXXX-IHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXF 697
+DI IH+HKTAKL+E A G IM F
Sbjct: 231 VDICSEGLSEVDLEKLEFIHIHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLF 290
Query: 698 QVVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDR 877
QVVDDILDVT++++ELGKTAGKD K TYPK +A+E+L GFD
Sbjct: 291 QVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLMGIEKSREFAEKLNKEAQEQLAGFDP 350
Query: 878 NRARPLRHLARYIA 919
+A PL LA YIA
Sbjct: 351 EKAAPLIALANYIA 364
Score = 51.6 bits (122), Expect(2) = 2e-34
Identities = 28/59 (47%), Positives = 30/59 (50%)
Frame = +1
Query: 145 FDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
FD K YM +K MRYSLL+ GKRVRP L LAACELVGG
Sbjct: 75 FDFKSYMVQKASAINQALEAAVSLREPLKIHESMRYSLLAGGKRVRPALCLAACELVGG 133
>ref|XP_004967872.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Setaria italica]
Length = 400
Score = 126 bits (317), Expect(2) = 3e-34
Identities = 79/196 (40%), Positives = 96/196 (48%), Gaps = 4/196 (2%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX---ELGRATGAEGLLAG 514
P+NHVAFGE A+LAGD ELG A G G+ AG
Sbjct: 201 PSNHVAFGEPTALLAGDALLALAFEHVARGCAAAGVPADRALRAVVELGSAAGVGGVAAG 260
Query: 515 QIMDIXXXXXXXXXXXXXX-IHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXX 691
Q+ D+ IH+HKTA+L+EAAAA G ++
Sbjct: 261 QVADMEGEGSAPVGLAALEYIHVHKTARLVEAAAASGAVVGGGGDAEVEHVRRYAHFLGL 320
Query: 692 XFQVVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGF 871
QVVDD+LDVT T+E+LGKTAGKD+A GK TYP+ KAE EL GF
Sbjct: 321 LLQVVDDVLDVTGTSEQLGKTAGKDAAAGKATYPRLLGLEGARAYAGELLAKAEAELDGF 380
Query: 872 DRNRARPLRHLARYIA 919
D RA PLRHLAR++A
Sbjct: 381 DAARAAPLRHLARFVA 396
Score = 46.2 bits (108), Expect(2) = 3e-34
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Frame = +1
Query: 76 RRRFLPAVRCVSS------VPKVA--DEADL----FDLKQYM-AEKXXXXXXXXXXXXXX 216
R R +P VRC ++ PKV D A++ FD ++Y+ A
Sbjct: 69 RSRSVPVVRCAAAHAATVTAPKVTSVDVANVGSGSFDFERYLSATAKAVHDALDAALQGL 128
Query: 217 XXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
MRYS+L+ GKR+RP L +AACELVGG
Sbjct: 129 RCPESLSESMRYSVLAGGKRLRPALAIAACELVGG 163
>ref|XP_006853583.1| hypothetical protein AMTR_s00566p00010050 [Amborella trichopoda]
gi|548857243|gb|ERN15050.1| hypothetical protein
AMTR_s00566p00010050 [Amborella trichopoda]
Length = 369
Score = 122 bits (307), Expect(2) = 4e-34
Identities = 80/195 (41%), Positives = 91/195 (46%), Gaps = 3/195 (1%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX--ELGRATGAEGLLAGQ 517
P NH FGEG AVLAGD ELG+A GAEGL+AGQ
Sbjct: 171 PTNHKVFGEGMAVLAGDALLSLAFEHLAAHTPTHVGSNRILGAIVELGKAVGAEGLVAGQ 230
Query: 518 IMDIXXXXXXXXXXXXXX-IHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXX 694
I+DI IH+HKTA L+E + CG ++
Sbjct: 231 IIDIASEGDPKVDLEVLEYIHVHKTAVLLECSVVCGAMLGGGSDEDVEKLRTYARHIGLL 290
Query: 695 FQVVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFD 874
FQVVDDILDVT +TEELGKTAGKD K TYPK KA+E L GFD
Sbjct: 291 FQVVDDILDVTASTEELGKTAGKDMVSDKATYPKLMGLSQARDFAEDLLNKAKEGLAGFD 350
Query: 875 RNRARPLRHLARYIA 919
+A PL LA YIA
Sbjct: 351 PAKAAPLLGLADYIA 365
Score = 49.7 bits (117), Expect(2) = 4e-34
Identities = 28/69 (40%), Positives = 33/69 (47%)
Frame = +1
Query: 115 VPKVADEADLFDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLT 294
+P + FD + YM K MRYSLL+ GKRVRP+L
Sbjct: 65 LPSQVEPMSEFDFEAYMKVKADRVNRALDVAVPLCHPEQINESMRYSLLASGKRVRPMLC 124
Query: 295 LAACELVGG 321
LAACELVGG
Sbjct: 125 LAACELVGG 133
>ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223535555|gb|EEF37223.1| geranyl geranyl
pyrophosphate synthase, putative [Ricinus communis]
Length = 369
Score = 121 bits (303), Expect(2) = 4e-34
Identities = 77/194 (39%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH+ FGE AVLAGD EL +A GAEGL+AGQ+
Sbjct: 172 PTNHIVFGEDVAVLAGDALLALAFEHIAIATLNVSPARIVRAVGELAKAIGAEGLVAGQV 231
Query: 521 MDIXXXXXXXXXXXXXX-IHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXF 697
+DI IH+HKTAKL+E A G IM F
Sbjct: 232 VDICSEGLSEVGLEKLEFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLF 291
Query: 698 QVVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDR 877
QVVDDILDVT++++ELGKTAGKD K TYPK +A+E+L GFD
Sbjct: 292 QVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLMGIDKSREFAEKLNKEAQEQLAGFDP 351
Query: 878 NRARPLRHLARYIA 919
+A PL LA YIA
Sbjct: 352 EKAAPLIALANYIA 365
Score = 51.2 bits (121), Expect(2) = 4e-34
Identities = 28/59 (47%), Positives = 30/59 (50%)
Frame = +1
Query: 145 FDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
FD K YM +K MRYSLL+ GKRVRP L LAACELVGG
Sbjct: 76 FDFKSYMLQKAASINQALDAAVPIREPTKIHESMRYSLLAGGKRVRPALCLAACELVGG 134
>gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii]
Length = 365
Score = 126 bits (316), Expect(2) = 4e-34
Identities = 79/193 (40%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH FGE AVLAGD ELG A G+EGL+AGQI
Sbjct: 169 PTNHKVFGENTAVLAGDALLSLAFEHVATKTQNVAPQRVVQAIGELGSAVGSEGLVAGQI 228
Query: 521 MDIXXXXXXXXXXXXXXIHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXFQ 700
+D+ IH HKTAKL+EAA CG IM FQ
Sbjct: 229 VDLASEGKQVSLTELEYIHQHKTAKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQ 288
Query: 701 VVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDRN 880
VVDDILDVT++++ELGKTAGKD K TYPK KA EL FD
Sbjct: 289 VVDDILDVTKSSDELGKTAGKDLITDKATYPKLMGLEKARQYAGELMAKAMNELSYFDSA 348
Query: 881 RARPLRHLARYIA 919
+A PL H+A YIA
Sbjct: 349 KAAPLYHIASYIA 361
Score = 46.2 bits (108), Expect(2) = 4e-34
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +1
Query: 145 FDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
F+ ++YM K MRYSLL+ GKRVRP+L +A+CE+VGG
Sbjct: 73 FEFQEYMVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRPILCMASCEVVGG 131
>ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 367
Score = 111 bits (277), Expect(2) = 5e-34
Identities = 73/194 (37%), Positives = 89/194 (45%), Gaps = 2/194 (1%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH FGE AVLAGD EL R+ G+EGL+AGQ+
Sbjct: 170 PTNHKVFGEDVAVLAGDALLAFAFEHIAASTRGASPGRIVRAIGELARSIGSEGLVAGQV 229
Query: 521 MDIXXXXXXXXXXXXXX-IHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXF 697
+DI IH+HKTA L+E A G I+ F
Sbjct: 230 VDINSEGLADVDLERLEFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLF 289
Query: 698 QVVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDR 877
QVVDDILDVT++++ELGKTAGKD K TYPK A+++L GFD
Sbjct: 290 QVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKVFAAKLNKDAQDQLVGFDP 349
Query: 878 NRARPLRHLARYIA 919
+A PL LA YIA
Sbjct: 350 VKAAPLIALANYIA 363
Score = 60.8 bits (146), Expect(2) = 5e-34
Identities = 38/93 (40%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 46 PSPSWSLASRRRRF-LPAVRCVSSVPKVADEADLFDLKQYMAEKXXXXXXXXXXXXXXXX 222
PSP SL +R F L AV + ++ +FD K YM K
Sbjct: 40 PSPISSLTVAKRSFTLSAVLTKEDTVETEEKPPIFDFKNYMVSKASAVNKALDDAVSLRE 99
Query: 223 XXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
MRYSLL+ GKRVRPVL +AACELVGG
Sbjct: 100 PQKIHEAMRYSLLAGGKRVRPVLCVAACELVGG 132
>gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
Length = 370
Score = 124 bits (312), Expect(2) = 7e-34
Identities = 76/193 (39%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH FGE A+LAGD ELG A G+EGL+AGQI
Sbjct: 174 PTNHKMFGEETAILAGDAMLSLAFEHIARATKNVSPERVVRVITELGSAVGSEGLVAGQI 233
Query: 521 MDIXXXXXXXXXXXXXXIHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXFQ 700
+D+ IH+HKTAKL+EAA CG I FQ
Sbjct: 234 VDVCSEGKEVNVKDLEYIHIHKTAKLLEAAVVCGAIAGGADDESIERVRKYARCIGLLFQ 293
Query: 701 VVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDRN 880
V+DDILDVT+++EELGKTAGKD K TYPK +A +EL FD
Sbjct: 294 VIDDILDVTKSSEELGKTAGKDLVSDKATYPKLLGIDEARKLAAKLVDEANQELAYFDSA 353
Query: 881 RARPLRHLARYIA 919
+A PL H A YIA
Sbjct: 354 KAAPLYHFANYIA 366
Score = 47.0 bits (110), Expect(2) = 7e-34
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +1
Query: 244 MRYSLLSPGKRVRPVLTLAACELVGG 321
MRYSLL+ GKRVRP+L +AACELVGG
Sbjct: 111 MRYSLLAGGKRVRPILCIAACELVGG 136
>sp|Q94ID7.1|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate
synthase [Hevea brasiliensis]
Length = 370
Score = 120 bits (301), Expect(2) = 7e-34
Identities = 76/194 (39%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH+ FGE AVLAGD EL +A GAEGL+AGQ+
Sbjct: 173 PTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQV 232
Query: 521 MDIXXXXXXXXXXXXXX-IHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXF 697
+DI IH+HKTAKL+E A G I+ F
Sbjct: 233 VDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLF 292
Query: 698 QVVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDR 877
QVVDDILDVT++++ELGKTAGKD K TYPK +A+E+L GFD
Sbjct: 293 QVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDP 352
Query: 878 NRARPLRHLARYIA 919
+A PL LA YIA
Sbjct: 353 EKAAPLIALANYIA 366
Score = 51.2 bits (121), Expect(2) = 7e-34
Identities = 28/59 (47%), Positives = 30/59 (50%)
Frame = +1
Query: 145 FDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
FD K YM +K MRYSLL+ GKRVRP L LAACELVGG
Sbjct: 77 FDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGG 135
>dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 120 bits (301), Expect(2) = 7e-34
Identities = 76/194 (39%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH+ FGE AVLAGD EL +A GAEGL+AGQ+
Sbjct: 173 PTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQV 232
Query: 521 MDIXXXXXXXXXXXXXX-IHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXF 697
+DI IH+HKTAKL+E A G I+ F
Sbjct: 233 VDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARGIGLLF 292
Query: 698 QVVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDR 877
QVVDDILDVT++++ELGKTAGKD K TYPK +A+E+L GFD
Sbjct: 293 QVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDP 352
Query: 878 NRARPLRHLARYIA 919
+A PL LA YIA
Sbjct: 353 EKAAPLIALANYIA 366
Score = 51.2 bits (121), Expect(2) = 7e-34
Identities = 28/59 (47%), Positives = 30/59 (50%)
Frame = +1
Query: 145 FDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
FD K YM +K MRYSLL+ GKRVRP L LAACELVGG
Sbjct: 77 FDFKSYMLQKANSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGG 135
>gb|AGU91431.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum boreale]
Length = 345
Score = 120 bits (300), Expect(2) = 7e-34
Identities = 74/193 (38%), Positives = 91/193 (47%), Gaps = 1/193 (0%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH+ +GE AVLAGD EL + G+EGL+AGQ+
Sbjct: 149 PTNHIVYGEEIAVLAGDALLSFAFEHVATATKDVSAERIVRAIGELAKCIGSEGLVAGQV 208
Query: 521 MDIXXXXXXXXXXXXXXIHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXFQ 700
+DI IHLHKTA L+E + G IM FQ
Sbjct: 209 VDICSEGADVGLEHLEFIHLHKTAALLEGSVVLGAIMGGGSDVEVERLRKFARSIGLLFQ 268
Query: 701 VVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDRN 880
VVDDILDVT+++EELGKTAGKD KTTYPK +A+E+L+ FD
Sbjct: 269 VVDDILDVTKSSEELGKTAGKDLVADKTTYPKLLGIEKSREFAEKLNKEAQEQLKEFDIR 328
Query: 881 RARPLRHLARYIA 919
+A PL LA YIA
Sbjct: 329 KAAPLIALANYIA 341
Score = 51.6 bits (122), Expect(2) = 7e-34
Identities = 27/59 (45%), Positives = 31/59 (52%)
Frame = +1
Query: 145 FDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
FD K YM +K MRYSLL+ GKRVRP+L LA+CELVGG
Sbjct: 53 FDFKSYMVQKANTVNQALDDAVPIREPKKIHESMRYSLLAGGKRVRPILCLASCELVGG 111
>dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium]
Length = 345
Score = 120 bits (300), Expect(2) = 7e-34
Identities = 74/193 (38%), Positives = 91/193 (47%), Gaps = 1/193 (0%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH+ +GE AVLAGD EL + G+EGL+AGQ+
Sbjct: 149 PTNHIVYGEEIAVLAGDALLSFAFEHVATATKDVSAERIVRAIGELAKCIGSEGLVAGQV 208
Query: 521 MDIXXXXXXXXXXXXXXIHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXFQ 700
+DI IHLHKTA L+E + G IM FQ
Sbjct: 209 VDICSEGADVGLEHLEFIHLHKTAALLEGSVVLGAIMGGGSDVEVERLRKFVRSIGLLFQ 268
Query: 701 VVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDRN 880
VVDDILDVT+++EELGKTAGKD KTTYPK +A+E+L+ FD
Sbjct: 269 VVDDILDVTKSSEELGKTAGKDLVADKTTYPKLLGIEKSREFAEKLNKEAQEQLKEFDIR 328
Query: 881 RARPLRHLARYIA 919
+A PL LA YIA
Sbjct: 329 KAAPLIALANYIA 341
Score = 51.6 bits (122), Expect(2) = 7e-34
Identities = 27/59 (45%), Positives = 31/59 (52%)
Frame = +1
Query: 145 FDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
FD K YM +K MRYSLL+ GKRVRP+L LA+CELVGG
Sbjct: 53 FDFKSYMVQKANTVNQALDDAVPIREPKKIHESMRYSLLAGGKRVRPILCLASCELVGG 111
>ref|XP_002305196.2| hypothetical protein POPTR_0004s08970g [Populus trichocarpa]
gi|550340635|gb|EEE85707.2| hypothetical protein
POPTR_0004s08970g [Populus trichocarpa]
Length = 365
Score = 122 bits (305), Expect(2) = 1e-33
Identities = 77/193 (39%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P +H FGE AVLAGD ELG G++GL+AGQI
Sbjct: 169 PTSHKIFGEDTAVLAGDALLSLAFEHVARNTKNVSSDRVVQAIAELGSTVGSKGLVAGQI 228
Query: 521 MDIXXXXXXXXXXXXXXIHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXFQ 700
+DI IH+HKTAKL+EAA CG IM FQ
Sbjct: 229 VDIDSEGKEVSLSTLEYIHVHKTAKLLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQ 288
Query: 701 VVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDRN 880
VVDDILDVT+++EELGKTAGKD A K TYPK +A + L FD
Sbjct: 289 VVDDILDVTKSSEELGKTAGKDLASDKATYPKLMGIDEAKKFAAQLVDEANQGLAFFDHV 348
Query: 881 RARPLRHLARYIA 919
+A PL H A YIA
Sbjct: 349 KAAPLYHFANYIA 361
Score = 48.9 bits (115), Expect(2) = 1e-33
Identities = 25/59 (42%), Positives = 31/59 (52%)
Frame = +1
Query: 145 FDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
F+ K+YM K MRYSLL+ GKRVRP+L +A+CELVGG
Sbjct: 73 FEFKEYMINKANQVNKALDEAVPLQHPQKINEAMRYSLLAGGKRVRPILCIASCELVGG 131
>ref|XP_006300178.1| hypothetical protein CARUB_v10016413mg [Capsella rubella]
gi|482568887|gb|EOA33076.1| hypothetical protein
CARUB_v10016413mg [Capsella rubella]
Length = 357
Score = 122 bits (305), Expect(2) = 1e-33
Identities = 80/197 (40%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX--ELGRATGAEGLLAGQ 517
P +H FGE AVLAGD EL +A G GL+AGQ
Sbjct: 157 PTSHKVFGENMAVLAGDALLALAFEHMTVRSSGLVVPERMIHAVIELAKAIGTTGLVAGQ 216
Query: 518 IMDIXXXXXXXXXXXXXX---IHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXX 688
++D+ IHLHKTA L+EAAA GVIM
Sbjct: 217 MIDLTSERMDPDSVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIG 276
Query: 689 XXFQVVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQG 868
FQVVDDILDVT++TEELGKTAGKD GK TYP+ +AEE+L G
Sbjct: 277 LLFQVVDDILDVTKSTEELGKTAGKDVMAGKVTYPRLIGLERSREFAEKLSMEAEEQLLG 336
Query: 869 FDRNRARPLRHLARYIA 919
FDR +A PL LA YIA
Sbjct: 337 FDREKAAPLVALASYIA 353
Score = 48.9 bits (115), Expect(2) = 1e-33
Identities = 27/64 (42%), Positives = 31/64 (48%)
Frame = +1
Query: 130 DEADLFDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACE 309
D FD K YM K +RYSLL+ GKRVRP+L +AACE
Sbjct: 56 DRHSPFDFKSYMNRKAESVSAALNVSVPLQEPLTVQEALRYSLLAGGKRVRPLLCIAACE 115
Query: 310 LVGG 321
LVGG
Sbjct: 116 LVGG 119
>gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 359
Score = 122 bits (306), Expect(2) = 2e-33
Identities = 77/193 (39%), Positives = 91/193 (47%), Gaps = 1/193 (0%)
Frame = +2
Query: 344 PANHVAFGEGFAVLAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ELGRATGAEGLLAGQI 520
P NH AFGE AVLAGD ELG+ G++GL+ GQI
Sbjct: 163 PTNHKAFGEETAVLAGDALLSLAFEHVATRSTGVSADRVVRVIAELGKCVGSDGLVGGQI 222
Query: 521 MDIXXXXXXXXXXXXXXIHLHKTAKLMEAAAACGVIMXXXXXXXXXXXXXXXXXXXXXFQ 700
+DI IHLHKTA L+EA+ CG IM FQ
Sbjct: 223 VDIASAGKQIELSELEYIHLHKTAILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQ 282
Query: 701 VVDDILDVTRTTEELGKTAGKDSACGKTTYPKXXXXXXXXXXXXXXXXKAEEELQGFDRN 880
VVDDILDVT+++EELGKTAGKD A K TYPK +A +EL +D
Sbjct: 283 VVDDILDVTKSSEELGKTAGKDLATDKATYPKLMGIDKAKEFADALVAQAHKELDYYDFA 342
Query: 881 RARPLRHLARYIA 919
+A PL H A YIA
Sbjct: 343 KAAPLYHFADYIA 355
Score = 48.1 bits (113), Expect(2) = 2e-33
Identities = 25/59 (42%), Positives = 31/59 (52%)
Frame = +1
Query: 145 FDLKQYMAEKXXXXXXXXXXXXXXXXXXXXXXXMRYSLLSPGKRVRPVLTLAACELVGG 321
F ++YMAE MRYSLL+ GKRVRP+L +A+CELVGG
Sbjct: 67 FQFEEYMAEMAERVNQALDDSVPLRHPLKIHEAMRYSLLAGGKRVRPILCIASCELVGG 125