BLASTX nr result

ID: Zingiber24_contig00019331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00019331
         (228 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321027.2| hypothetical protein POPTR_0014s12770g [Popu...    60   4e-07
ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm...    55   1e-05

>ref|XP_002321027.2| hypothetical protein POPTR_0014s12770g [Populus trichocarpa]
           gi|550324082|gb|EEE99342.2| hypothetical protein
           POPTR_0014s12770g [Populus trichocarpa]
          Length = 400

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/76 (34%), Positives = 46/76 (60%)
 Frame = -1

Query: 228 VNAIKNSPWLMALDIRTKVLPKVDALRAHGVPDDVICVLLTRYGDALVTDTNRFNEAFDK 49
           V+A K + W+   D+   ++P ++ LR  GVP   I +LLT + +A++ +   F+E  ++
Sbjct: 183 VSAFKRTTWIFLEDLSKNLIPNLELLRKVGVPQSCISLLLTHFPEAMMENHEEFSENVEE 242

Query: 48  IKKMGICPKKTTFARA 1
           ++KMG  P K+TF  A
Sbjct: 243 VRKMGFDPNKSTFVLA 258


>ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis]
           gi|223540048|gb|EEF41625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/76 (34%), Positives = 43/76 (56%)
 Frame = -1

Query: 228 VNAIKNSPWLMALDIRTKVLPKVDALRAHGVPDDVICVLLTRYGDALVTDTNRFNEAFDK 49
           V+A+K + W+   D    ++P V+ LR  GV    I +LLT + +A++     FN+   +
Sbjct: 159 VSALKRTTWIFLEDYSKNLMPNVERLREIGVTHSCISLLLTNFPEAVLQRHGEFNKVVKE 218

Query: 48  IKKMGICPKKTTFARA 1
           +K+MG  PKK+ F  A
Sbjct: 219 VKEMGFDPKKSIFVMA 234


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