BLASTX nr result
ID: Zingiber24_contig00019293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00019293
(558 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobrom... 70 4e-10
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe... 67 2e-09
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 65 1e-08
ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Popu... 64 2e-08
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 63 4e-08
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 63 4e-08
ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 63 5e-08
ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citr... 63 5e-08
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 63 5e-08
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 63 5e-08
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 63 5e-08
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 63 5e-08
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe... 62 9e-08
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 61 2e-07
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 61 2e-07
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 61 2e-07
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 61 2e-07
ref|XP_004297187.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 60 3e-07
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m... 60 3e-07
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 60 5e-07
>gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1100
Score = 69.7 bits (169), Expect = 4e-10
Identities = 65/190 (34%), Positives = 89/190 (46%), Gaps = 23/190 (12%)
Frame = -2
Query: 503 IQMWRGIARTACRSSRNFRFSGDRPAEFPTFSCFLGSSTNSILCKENTI----FDSSLA- 339
I MWR IA+ A S R F F FLG+S +SI +++ F S +
Sbjct: 40 IVMWRNIAKHAI-SRRTHSFQC-----FARTYSFLGTSQDSIFHEKSKFRGLKFGSFCSN 93
Query: 338 ARLLDVCFRRKGQAGVSVWEVTGLHTNS------------RSFTSIAEAVSSTDADEDTS 195
+R LD+ RR G+ +V + S R + S+AEAVSSTD +ED S
Sbjct: 94 SRFLDMGGRRIGEVLTNVEYIGKQSFGSPRNEIGCSGLCPRGYVSVAEAVSSTDVEEDVS 153
Query: 194 TIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPR------MIAGMISGKYLSLHRRQV 33
+EE++ ++ E+K Q+ + R + GM KY L RRQV
Sbjct: 154 VVEEIKE-------------LLDEMKKEQRRETGNRRRRCQIIERGMGESKYRFLRRRQV 200
Query: 32 KIETEAWEQA 3
KIETEAWEQA
Sbjct: 201 KIETEAWEQA 210
>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 67.4 bits (163), Expect = 2e-09
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 22/187 (11%)
Frame = -2
Query: 497 MWRGIARTACRSSRNFRFSGDRPAEFPTFSCFLGSSTNSILCKENTIFDSS--------L 342
MWR +A+ +SR S P SST+ I +E++ D + +
Sbjct: 1 MWRNLAKQV--ASRKTNLSSQSHFGSP-------SSTSMIFSQESSFLDKARHFEARKCI 51
Query: 341 AARLLDVCFRRKGQAGVSVWE--------------VTGLHTNSRSFTSIAEAVSSTDADE 204
R+L + FR+ G E ++G ++ + S+AEA++STD +E
Sbjct: 52 NNRILVMGFRQVGDMASQKEELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEE 111
Query: 203 DTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRMIAGMISGKYLSLHRRQVKIE 24
D+S EE++ + +D I + F++ R++ GM GKY L +RQ+K+E
Sbjct: 112 DSSGSEEIQ--------EMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLE 163
Query: 23 TEAWEQA 3
TEAW++A
Sbjct: 164 TEAWQEA 170
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Frame = -2
Query: 254 RSFTSIAEAVSSTDADEDTSTIEE-------MRNDNSGGGGKHKDDGIVTEVKMNQQFQK 96
R + ++AEAVSSTD +ED S +EE M+ + GGG+++
Sbjct: 130 RGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEQQSGGGRNRR--------------- 174
Query: 95 SPRMIAGMISGKYLSLHRRQVKIETEAWEQA 3
R+ GM SGKY L RQVKIETEAWE+A
Sbjct: 175 --RVARGMGSGKYRMLKMRQVKIETEAWEKA 203
>ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Populus trichocarpa]
gi|550340797|gb|ERP62048.1| hypothetical protein
POPTR_0004s11060g [Populus trichocarpa]
Length = 475
Score = 63.9 bits (154), Expect = 2e-08
Identities = 62/191 (32%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Frame = -2
Query: 497 MWRGIARTACRS--SRNFRFSGDRPAEFPTFSCFLGSSTNSILCKENTIFDSSLAARLLD 324
MWR +A+ A S++ F FP FLG+ I +++ + ++ L
Sbjct: 38 MWRNVAKQAILKPQSKSLNFPS-----FPRTHSFLGAPQEPIFFEKSKFHSVNNSSPQL- 91
Query: 323 VCFRRKGQAGVSVWEV-----------TGLHTNS--------RSFTSIAEAVSSTDADED 201
CFRR G+ +S E G +N R + S+AEAVSSTD +++
Sbjct: 92 -CFRRIGE--ISTHEDYMGKPSFGFLRNGDSSNGNLCSGLCPRGYVSVAEAVSSTDVEDN 148
Query: 200 TSTIEEMRN---DNSGGGGKHKDDGIVTEVKMNQQFQKSPRMIA--GMISGKYLSLHRRQ 36
EE++ D K KD F++ R+ A GM SGKY +L RRQ
Sbjct: 149 VVVDEELQELLQDTRKEEEKEKD------------FRRRRRLHANRGMGSGKYKALRRRQ 196
Query: 35 VKIETEAWEQA 3
VKIE EAWEQA
Sbjct: 197 VKIEAEAWEQA 207
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 63.2 bits (152), Expect = 4e-08
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Frame = -2
Query: 497 MWRGIART-ACRSSRNFRFSGDRPAEFPTFSCFLGSSTNSILCKENTIFDSSLAARLLDV 321
MWR I + + R+ + FS T+S FLG +SI K+NT F S + ++
Sbjct: 35 MWRNIIKQLSSRTPQKLLFSSKNR----TYS-FLGFGQDSIF-KDNTKFRSLIPISCSNI 88
Query: 320 C--FRRKGQ---------AGVSVWEVTGLHTNSRSFTSIAEAV--SSTDADEDTSTIEEM 180
F+ G+ + +V +S+ S+AEAV SSTDA+ED S ++E+
Sbjct: 89 VMGFQNLGEYLPGDEFLSRPLIKNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEV 148
Query: 179 RNDNSGGGGKHKDDGIVTEVKMNQQFQ------KSPRMIAGMISGKYLSLHRRQVKIETE 18
++TE+K ++ Q K + +GM KY +L RRQVK+ETE
Sbjct: 149 HE-------------LLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETE 195
Query: 17 AWEQA 3
AWEQA
Sbjct: 196 AWEQA 200
>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 63.2 bits (152), Expect = 4e-08
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Frame = -2
Query: 497 MWRGIART-ACRSSRNFRFSGDRPAEFPTFSCFLGSSTNSILCKENTIFDSSLAARLLDV 321
MWR I + + R+ + FS T+S FLG +SI K+NT F S + ++
Sbjct: 35 MWRNIIKQLSSRTPQKLLFSSKNR----TYS-FLGFGQDSIF-KDNTKFRSLIPISCSNI 88
Query: 320 C--FRRKGQ---------AGVSVWEVTGLHTNSRSFTSIAEAV--SSTDADEDTSTIEEM 180
F+ G+ + +V +S+ S+AEAV SSTDA+ED S ++E+
Sbjct: 89 VMGFQNLGEYLPGDEFLSRPLIKNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEV 148
Query: 179 RNDNSGGGGKHKDDGIVTEVKMNQQFQ------KSPRMIAGMISGKYLSLHRRQVKIETE 18
++TE+K ++ Q K + +GM KY +L RRQVK+ETE
Sbjct: 149 HE-------------LLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETE 195
Query: 17 AWEQA 3
AWEQA
Sbjct: 196 AWEQA 200
>ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Citrus sinensis]
Length = 980
Score = 62.8 bits (151), Expect = 5e-08
Identities = 57/173 (32%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Frame = -2
Query: 497 MWRGIARTACRSSRNFRFSGDRPAEFPTFSCFLGSSTNSILCKENTIFDSS---LAARLL 327
MWR +AR + S+RNF+FS P++ + FL T+ + T+ DSS L R
Sbjct: 1 MWRNLARQS--STRNFKFS---PSKVSQTTNFLKKITS---LETQTLLDSSCPLLGFRRT 52
Query: 326 DVCFRRKGQAGVSVWEVT----GLHTNSRSFTSIAEAVSSTDADEDTSTIEEMRNDNSGG 159
+K G S + + G+ T SRS+ S AEA++S + ++E+ + +
Sbjct: 53 SFLSSQKSNLGQSNFTQSIYPFGVLT-SRSYASAAEAIASESELSGSEEVQELIDQFNEK 111
Query: 158 GGKHKDDGIVTEVKMNQQFQKSPRMIA-GMISGKYLSLHRRQVKIETEAWEQA 3
G V+ + + K P+ GM + KY L RRQ+KIETEAWEQA
Sbjct: 112 G--------VSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQA 156
>ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citrus clementina]
gi|557540028|gb|ESR51072.1| hypothetical protein
CICLE_v10030633mg [Citrus clementina]
Length = 980
Score = 62.8 bits (151), Expect = 5e-08
Identities = 57/173 (32%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Frame = -2
Query: 497 MWRGIARTACRSSRNFRFSGDRPAEFPTFSCFLGSSTNSILCKENTIFDSS---LAARLL 327
MWR +AR + S+RNF+FS P++ + FL T+ + T+ DSS L R
Sbjct: 1 MWRNLARQS--STRNFKFS---PSKVSQTTNFLKKITS---LETQTLLDSSCPLLGFRRT 52
Query: 326 DVCFRRKGQAGVSVWEVT----GLHTNSRSFTSIAEAVSSTDADEDTSTIEEMRNDNSGG 159
+K G S + + G+ T SRS+ S AEA++S + ++E+ + +
Sbjct: 53 SFLSSQKSNLGQSNFTQSIYPFGVLT-SRSYASAAEAIASESELSGSEEVQELIDQFNEK 111
Query: 158 GGKHKDDGIVTEVKMNQQFQKSPRMIA-GMISGKYLSLHRRQVKIETEAWEQA 3
G V+ + + K P+ GM + KY L RRQ+KIETEAWEQA
Sbjct: 112 G--------VSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQA 156
>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533046|gb|ESR44229.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 928
Score = 62.8 bits (151), Expect = 5e-08
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Frame = -2
Query: 254 RSFTSIAEAVSSTDADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQ-------K 96
R + ++AEAVSSTD +ED S +EE++ ++ E+K +Q +
Sbjct: 130 RGYATVAEAVSSTDVEEDVSIVEEIQE-------------LLQEMKKEEQREGENGGGRN 176
Query: 95 SPRMIAGMISGKYLSLHRRQVKIETEAWEQA 3
R+ GM SGKY L RQVKIETEAWEQA
Sbjct: 177 RRRVARGMGSGKYRMLKMRQVKIETEAWEQA 207
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 62.8 bits (151), Expect = 5e-08
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Frame = -2
Query: 254 RSFTSIAEAVSSTDADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQ-------K 96
R + ++AEAVSSTD +ED S +EE++ ++ E+K +Q +
Sbjct: 130 RGYATVAEAVSSTDVEEDVSIVEEIQE-------------LLQEMKKEEQREGENGGGRN 176
Query: 95 SPRMIAGMISGKYLSLHRRQVKIETEAWEQA 3
R+ GM SGKY L RQVKIETEAWEQA
Sbjct: 177 RRRVARGMGSGKYRMLKMRQVKIETEAWEQA 207
>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533044|gb|ESR44227.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 933
Score = 62.8 bits (151), Expect = 5e-08
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Frame = -2
Query: 254 RSFTSIAEAVSSTDADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQ-------K 96
R + ++AEAVSSTD +ED S +EE++ ++ E+K +Q +
Sbjct: 130 RGYATVAEAVSSTDVEEDVSIVEEIQE-------------LLQEMKKEEQREGENGGGRN 176
Query: 95 SPRMIAGMISGKYLSLHRRQVKIETEAWEQA 3
R+ GM SGKY L RQVKIETEAWEQA
Sbjct: 177 RRRVARGMGSGKYRMLKMRQVKIETEAWEQA 207
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial [Vitis vinifera]
gi|298204431|emb|CBI16911.3| unnamed protein product
[Vitis vinifera]
Length = 1035
Score = 62.8 bits (151), Expect = 5e-08
Identities = 62/182 (34%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Frame = -2
Query: 497 MWRGIARTAC-RSSRNFRFSGDRPAEFPTFSCFLGSSTNSI---LCKENTIFDSSLAAR- 333
MWR IA+ A R+ R + +P FLG S + I + K T SS ++
Sbjct: 40 MWRNIAKRAIPRAPRKCVYLDSQPLS--RRYSFLGFSQDLIFPEIMKFGTFEPSSCSSSG 97
Query: 332 LLDVCFRRKGQAGVSVWEVT----GLHTNS--------RSFTSIAEAVSSTDADEDTSTI 189
++ FRR G+ V G N +S+ S+AEAVSSTD +ED S
Sbjct: 98 FSEMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPKSYASVAEAVSSTDVEEDVSAS 157
Query: 188 EEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRMIAGMISGKYLSLHRRQVKIETEAWE 9
+E++ G K++ + ++N + ++ +M GM G+YL L RRQVKIETEAWE
Sbjct: 158 DEIQELL---GEMKKEE----KRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWE 210
Query: 8 QA 3
A
Sbjct: 211 LA 212
>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 62.0 bits (149), Expect = 9e-08
Identities = 55/181 (30%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Frame = -2
Query: 497 MWRGIARTACRSSRNFRFSGDRPAEFPTFSCFLGSSTNSILCKENTIFDSSLAA--RLLD 324
+WR A+ A + F + F LG S+ F+ S + R +
Sbjct: 36 VWRNFAKQAISRKQRFHINSQ---SFSRAYSLLGICQESVFPGNFKPFELSSCSSLRFSE 92
Query: 323 VCFRRKGQAGV--------SVWEVTG-LHTNS---RSFTSIAEAVSSTDADEDTSTIEEM 180
V FR KG S W V + N + + S+AEAVSSTD +E+ S ++E+
Sbjct: 93 VGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVAEAVSSTDVEEEVSVVDEV 152
Query: 179 RNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRM--IAGMISGKYLSLHRRQVKIETEAWEQ 6
+ + E K Q+++ R GM GKY L RRQ+KIETEAWE+
Sbjct: 153 QE---------LLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWER 203
Query: 5 A 3
A
Sbjct: 204 A 204
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 61.2 bits (147), Expect = 2e-07
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = -2
Query: 254 RSFTSIAEAVSST---DADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRM 84
RS+ S AEA++ST D DE IEEM +N +K N Q K P+
Sbjct: 112 RSYGSAAEAIASTSEEDTDEIQELIEEMNKENEA-------------LKTNLQ-PKQPKT 157
Query: 83 IAGMISGKYLSLHRRQVKIETEAWEQA 3
I GM GKY L RRQ+K+ETEAWE+A
Sbjct: 158 IGGMGVGKYNLLRRRQIKVETEAWEEA 184
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and
chloroplast RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 61.2 bits (147), Expect = 2e-07
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 8/92 (8%)
Frame = -2
Query: 254 RSFTSIAEAV--SSTDADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQ------ 99
+S+ S+AEAV SSTDA+ED S ++E++ ++TE+K ++ Q
Sbjct: 123 KSYASVAEAVAVSSTDAEEDVSVVDEVQE-------------LLTELKKEEKKQFAFRRR 169
Query: 98 KSPRMIAGMISGKYLSLHRRQVKIETEAWEQA 3
K + +GM KY +L RRQVK+ETEAWEQA
Sbjct: 170 KQRMLTSGMGHRKYQTLKRRQVKVETEAWEQA 201
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 60.8 bits (146), Expect = 2e-07
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = -2
Query: 254 RSFTSIAEAVSST---DADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRM 84
RS+ S AEA++ST D DE IEEM +N +K N Q K P+
Sbjct: 112 RSYGSAAEAIASTSEEDIDEIQELIEEMNKENEA-------------LKTNLQ-PKQPKT 157
Query: 83 IAGMISGKYLSLHRRQVKIETEAWEQA 3
I GM GKY L RRQ+K+ETEAWE+A
Sbjct: 158 IGGMGVGKYNLLRRRQIKVETEAWEEA 184
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial;
AltName: Full=NsRpoT-A; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1;
Flags: Precursor gi|15824083|dbj|BAB69431.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1002
Score = 60.8 bits (146), Expect = 2e-07
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = -2
Query: 254 RSFTSIAEAVSST---DADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRM 84
RS+ S AEA++ST D DE IEEM +N +K N Q K P+
Sbjct: 112 RSYGSAAEAIASTSEEDIDEIQELIEEMNKENEA-------------LKTNLQ-PKQPKT 157
Query: 83 IAGMISGKYLSLHRRQVKIETEAWEQA 3
I GM GKY L RRQ+K+ETEAWE+A
Sbjct: 158 IGGMGVGKYNLLRRRQIKVETEAWEEA 184
>ref|XP_004297187.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 997
Score = 60.5 bits (145), Expect = 3e-07
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = -2
Query: 254 RSFTSIAEAVSSTDADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRMIAG 75
R + S AEA++STD + + I+ M D +V E K+ ++ R+++G
Sbjct: 79 RGYASSAEAIASTDEESGSEEIQVMLED------------LVRECKVEDDSKQPKRLVSG 126
Query: 74 MISGKYLSLHRRQVKIETEAWEQA 3
M +GKY L RRQVK+ETEAWE A
Sbjct: 127 MGAGKYGILRRRQVKLETEAWEDA 150
>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
DNA-directed RNA polymerase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 997
Score = 60.5 bits (145), Expect = 3e-07
Identities = 58/187 (31%), Positives = 77/187 (41%), Gaps = 22/187 (11%)
Frame = -2
Query: 497 MWRGIARTACRSSRNFRFSGD--------------RPAEFPTFSC----FLGSSTNSILC 372
MWR AR SS+ FS D R E T C FLGS S L
Sbjct: 1 MWRNFARRTSLSSKKLNFSSDCTQLNQDLDILQKVRHPEAQTLLCSPYSFLGSRRISGLS 60
Query: 371 KENTIFDSSLAARLLDVC----FRRKGQAGVSVWEVTGLHTNSRSFTSIAEAVSSTDADE 204
+N F L + F KG A T+ A+ ++STD +
Sbjct: 61 SQNHEFIKPSFTNLTNPFGFSHFLFKGYA-----------------TAAAQVIASTD-ES 102
Query: 203 DTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRMIAGMISGKYLSLHRRQVKIE 24
D S +E++ HK + + QQ Q+ + IAGM GKY L +RQ+K+E
Sbjct: 103 DFSGCDELQEQIEEINKHHKK--MDAHFRQQQQQQQRKKTIAGMGIGKYTILKKRQIKME 160
Query: 23 TEAWEQA 3
TEAWE+A
Sbjct: 161 TEAWEEA 167
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum tuberosum]
Length = 993
Score = 59.7 bits (143), Expect = 5e-07
Identities = 38/87 (43%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = -2
Query: 254 RSFTSIAEAVSST---DADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRM 84
RS+ S AEA++ST D DE IEEM +N +K N Q K P+
Sbjct: 104 RSYGSAAEAIASTSEEDIDEIQELIEEMNKENEA-------------LKTNLQ-PKQPKT 149
Query: 83 IAGMISGKYLSLHRRQVKIETEAWEQA 3
+ GM GKY L RRQ+K+ETEAWE A
Sbjct: 150 VGGMGIGKYNLLRRRQIKVETEAWEDA 176