BLASTX nr result
ID: Zingiber24_contig00019246
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00019246
(564 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma rosco... 132 7e-43
gb|AGE93428.1| hypothetical chloroplast RF19 [Alpinia zerumbet] 107 6e-32
ref|YP_007475762.1| hypothetical chloroplast RF19 [Zingiber spec... 71 5e-23
gb|AHA12982.1| hypothetical chloroplast RF19 [Monocostus uniflorus] 57 1e-09
gb|AHA12896.1| hypothetical chloroplast RF19 [Maranta leuconeura] 57 1e-08
ref|YP_008854483.1| hypothetical chloroplast RF19 [Musa textilis... 53 1e-08
gb|AFM83351.1| hypothetical chloroplast RF19 (chloroplast) [King... 50 8e-08
gb|AHA13068.1| hypothetical chloroplast RF19 [Costus pulverulentus] 50 1e-07
gb|AHA12813.1| hypothetical chloroplast RF19 [Canna indica] 53 2e-07
gb|AEX94019.1| hypothetical chloroplast RF19 (chloroplast) [Lede... 44 7e-07
gb|AEX94017.1| hypothetical chloroplast RF19 (chloroplast) [Bowi... 49 1e-06
ref|YP_007475677.1| hypothetical chloroplast RF19 [Heliconia col... 58 2e-06
gb|AEX94024.1| hypothetical chloroplast RF19 (chloroplast) [Loma... 44 4e-06
ref|YP_003434033.1| hypothetical chloroplast RF19 [Typha latifol... 47 7e-06
>ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma roscoeana]
gi|557637559|gb|AHA13154.1| hypothetical chloroplast RF19
[Curcuma roscoeana]
Length = 1815
Score = 132 bits (331), Expect(2) = 7e-43
Identities = 67/80 (83%), Positives = 68/80 (85%)
Frame = -2
Query: 293 PEFRFPFDTYKAYXXXXXXXXXXXXLSNQNLDEKKKISQNKSVKDSILIKLKNQEKNEEK 114
PEFRFPFDTYKAY LSNQNLDEKKKISQNKSVKDSILIKLKNQEKNEEK
Sbjct: 1466 PEFRFPFDTYKAYKIKPWIIPIKLLLSNQNLDEKKKISQNKSVKDSILIKLKNQEKNEEK 1525
Query: 113 TNLVSDPSKQNKKKPLQKDY 54
TNLVSDP+KQNKKKPLQKDY
Sbjct: 1526 TNLVSDPNKQNKKKPLQKDY 1545
Score = 68.2 bits (165), Expect(2) = 7e-43
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = -3
Query: 409 YKKNNSNEKSFFDWMGMNRKRERVFCKKKKNQI 311
YKKNNSN+K+FFDWMGMNRKRERVFCKKKK+ +
Sbjct: 1428 YKKNNSNQKNFFDWMGMNRKRERVFCKKKKSNL 1460
>gb|AGE93428.1| hypothetical chloroplast RF19 [Alpinia zerumbet]
Length = 1795
Score = 107 bits (268), Expect(2) = 6e-32
Identities = 62/85 (72%), Positives = 62/85 (72%), Gaps = 4/85 (4%)
Frame = -2
Query: 293 PEFRFPFD--TYKAYXXXXXXXXXXXXLSNQNLDEKKKISQNKSVKDSILIKLKN--QEK 126
PE RFPFD TYKAY LSN NLD KKKISQNKSVKDSILIKLK QEK
Sbjct: 1442 PELRFPFDFDTYKAYKTKPWIIPIKLLLSNHNLDGKKKISQNKSVKDSILIKLKKKIQEK 1501
Query: 125 NEEKTNLVSDPSKQNKKKPLQKDYA 51
NEEK N VSDPSKQNKKK LQKDYA
Sbjct: 1502 NEEKVNPVSDPSKQNKKKTLQKDYA 1526
Score = 55.8 bits (133), Expect(2) = 6e-32
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = -3
Query: 409 YKKNNSNEKSFFDWMGMNRKRERVFCKKKKNQI 311
YKKNNSN+K+FFDWMGMNRK +FCKKKK+ +
Sbjct: 1406 YKKNNSNQKNFFDWMGMNRK--IIFCKKKKSNL 1436
>ref|YP_007475762.1| hypothetical chloroplast RF19 [Zingiber spectabile]
gi|449326242|gb|AGE92827.1| hypothetical chloroplast RF19
[Zingiber spectabile]
Length = 1817
Score = 71.2 bits (173), Expect(2) = 5e-23
Identities = 44/80 (55%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = -2
Query: 293 PEFRFPFD--TYKAYXXXXXXXXXXXXLSNQNLDEKKKISQNKSVKDSILIKLKNQEKNE 120
PEFRFPF+ TYKAY LSNQN + KKKISQNK+VKDSILIKLKNQEK
Sbjct: 1492 PEFRFPFNLNTYKAYKIKPWIIPIKLLLSNQNFELKKKISQNKNVKDSILIKLKNQEK-- 1549
Query: 119 EKTNLVSDPSKQNKKKPLQK 60
P K KK+ +K
Sbjct: 1550 --------PIKLKKKRRCKK 1561
Score = 62.4 bits (150), Expect(2) = 5e-23
Identities = 28/33 (84%), Positives = 30/33 (90%), Gaps = 2/33 (6%)
Frame = -3
Query: 409 YKKNNSNEKSFFDWMGMNRK--RERVFCKKKKN 317
YKKNNSN+K+FFDWMGMNRK RERVFCKKK N
Sbjct: 1453 YKKNNSNQKNFFDWMGMNRKRERERVFCKKKSN 1485
>gb|AHA12982.1| hypothetical chloroplast RF19 [Monocostus uniflorus]
Length = 1842
Score = 56.6 bits (135), Expect(2) = 1e-09
Identities = 39/83 (46%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = -2
Query: 293 PEFRFPFDTYKAYXXXXXXXXXXXXLSN-QNLDEKKKISQNKSVKDSILIKL--KNQEKN 123
PEF PFD YK SN + +KKISQNK++KDSI I+ NQEK
Sbjct: 1495 PEFVLPFDAYKM---KPWIIPIKLLFSNIYYYENEKKISQNKNIKDSIKIEFPNSNQEKK 1551
Query: 122 EEKTNLVSDPSKQNKKKPLQKDY 54
EE NLVSD K+++KK Q+DY
Sbjct: 1552 EE-ANLVSDLRKESQKKYPQEDY 1573
Score = 31.6 bits (70), Expect(2) = 1e-09
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -3
Query: 400 NNSNEKSFFDWMGMNRKRERVFC 332
N SN+K DW+GMN RERV+C
Sbjct: 1464 NLSNQKKKMDWIGMN--RERVYC 1484
>gb|AHA12896.1| hypothetical chloroplast RF19 [Maranta leuconeura]
Length = 1902
Score = 57.0 bits (136), Expect(2) = 1e-08
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = -2
Query: 293 PEFRFPFDTYKAYXXXXXXXXXXXXLSNQNLDEKKKISQNKSVKDSILIKLK--NQEKNE 120
PEF PFD YK + + KK ISQNK++KDS+ ++ + NQEKNE
Sbjct: 1547 PEFVLPFDVYKIKPWIIPIKLLLSNIDCNYNENKKNISQNKNIKDSMKMEFQNSNQEKNE 1606
Query: 119 EK--TNLVSDPSKQNKKKPLQKDY 54
EK +NLVS+ QN+KK L+++Y
Sbjct: 1607 EKGQSNLVSN---QNQKKHLEENY 1627
Score = 28.1 bits (61), Expect(2) = 1e-08
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 403 KNNSNEKSFFDWMGMNR 353
K +K F DWMGMNR
Sbjct: 1517 KKKKKKKDFLDWMGMNR 1533
>ref|YP_008854483.1| hypothetical chloroplast RF19 [Musa textilis]
gi|557636970|gb|AHA12572.1| hypothetical chloroplast RF19
[Musa textilis]
Length = 1901
Score = 53.1 bits (126), Expect(2) = 1e-08
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -2
Query: 293 PEFRFPFDTYKAYXXXXXXXXXXXXLSNQNLDEKKKISQNKSVKDSILIKLKNQEKNEE- 117
PEF PFD YK N+ + ISQN+++KDS+ I+ +N + +E
Sbjct: 1555 PEFVLPFDAYKIKPWIIPIKLLL-----SNIYYENDISQNQNIKDSVKIEFQNSNQEKEG 1609
Query: 116 KTNLVSDPSKQNKKKPLQKD 57
++NLVSDP KQN+K+ ++D
Sbjct: 1610 QSNLVSDPQKQNQKEYPEED 1629
Score = 31.6 bits (70), Expect(2) = 1e-08
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 403 KNNSNEKSFFDWMGMNR 353
K +++K FFDWMGMNR
Sbjct: 1525 KTKTHQKKFFDWMGMNR 1541
>gb|AFM83351.1| hypothetical chloroplast RF19 (chloroplast) [Kingia australis]
Length = 1849
Score = 49.7 bits (117), Expect(2) = 8e-08
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Frame = -2
Query: 293 PEFRFPFDTYKAYXXXXXXXXXXXXLS---------NQNLDEKKKISQNKSVKDSILIKL 141
PEF FD YK LS N N+++KK + + K+ + ++
Sbjct: 1487 PEFVLLFDAYKIKTWIMPIKLLLCNLSLYENSSQNKNININQKKNFKISSNQKEYLKLEN 1546
Query: 140 KNQEKNEEKT--NLVSDPSKQNKKKPLQKDYA 51
NQEKNE++ N+ SD KQNKKK L++DYA
Sbjct: 1547 SNQEKNEQQVEGNIGSDLRKQNKKKDLEEDYA 1578
Score = 32.3 bits (72), Expect(2) = 8e-08
Identities = 15/24 (62%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = -3
Query: 400 NNSNEKS-FFDWMGMNRKRERVFC 332
N SN+K FFDWMGMN +ER++C
Sbjct: 1455 NPSNQKRYFFDWMGMN--QERIYC 1476
>gb|AHA13068.1| hypothetical chloroplast RF19 [Costus pulverulentus]
Length = 1825
Score = 49.7 bits (117), Expect(2) = 1e-07
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = -2
Query: 293 PEFRFPFDTYKAYXXXXXXXXXXXXLSN-QNLDEKKKISQNKSVKDSILIKL--KNQEKN 123
PEF PFD YK SN + +K ISQNK++KDSI I+ NQEK
Sbjct: 1477 PEFVLPFDAYKM---KPWIIPIKLLFSNIYYYENEKNISQNKNIKDSIKIEFTNSNQEKK 1533
Query: 122 EEKTNL--VSDPSKQNKKKPLQKDY 54
EE NL VSD K+++KK Q+DY
Sbjct: 1534 EE-ANLVFVSDLRKESQKKYPQEDY 1557
Score = 31.6 bits (70), Expect(2) = 1e-07
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -3
Query: 400 NNSNEKSFFDWMGMNRKRERVFC 332
N SN+K DW+GMN RERV+C
Sbjct: 1446 NLSNQKKKMDWIGMN--RERVYC 1466
>gb|AHA12813.1| hypothetical chloroplast RF19 [Canna indica]
Length = 1803
Score = 52.8 bits (125), Expect(2) = 2e-07
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Frame = -2
Query: 293 PEFRFPFDTYKAYXXXXXXXXXXXXLS-NQNLDEKKK-ISQNKSVKDSILIKLKNQEKNE 120
PEF PFDTYK + N++ +E +K IS+NK++KDSI IK++ + N+
Sbjct: 1447 PEFVLPFDTYKIKPWIIPIKLLLSNICYNESYNENEKNISENKNIKDSIKIKMELKNSNQ 1506
Query: 119 EK------TNLVSDPSKQNKKKPLQKDYA 51
EK +NLVS+ KQ KK L+++YA
Sbjct: 1507 EKKKKEGQSNLVSNLQKQ--KKDLEENYA 1533
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 400 NNSNEKSFFDWMGMNR 353
N FFDWMGMNR
Sbjct: 1418 NQKKNTHFFDWMGMNR 1433
>gb|AEX94019.1| hypothetical chloroplast RF19 (chloroplast) [Ledebouria cordifolia]
Length = 1802
Score = 43.9 bits (102), Expect(2) = 7e-07
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Frame = -2
Query: 290 EFRFPFDTYKAYXXXXXXXXXXXXLS-NQNLDEKKKISQNKSVKDSILIKLK-------- 138
EF FDTYK N+N+ + +KI NK IL K
Sbjct: 1458 EFVLLFDTYKIKPWLIPIKLLIFHFHRNENISQSQKIDVNKKKNLPILANQKEYLELENS 1517
Query: 137 NQEKNEEKT--NLVSDPSKQNKKKPLQKDY 54
N+ KNE+++ +LVSD KQNKKK +++DY
Sbjct: 1518 NKNKNEQQSQGDLVSDLRKQNKKKDVEEDY 1547
Score = 35.0 bits (79), Expect(2) = 7e-07
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = -3
Query: 406 KKNNSNEKSFFDWMGMNRKRERVFC 332
+K ++ EK+FFDWMGMN +ER++C
Sbjct: 1424 QKPSNQEKNFFDWMGMN--QERLYC 1446
>gb|AEX94017.1| hypothetical chloroplast RF19 (chloroplast) [Bowiea volubilis]
Length = 1804
Score = 48.9 bits (115), Expect(2) = 1e-06
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Frame = -2
Query: 293 PEFRFPFDTYKAYXXXXXXXXXXXXL-SNQNLDEKKKISQNKSVKDSIL------IKLKN 135
PEF FDTYK N+N+ + +KI NK IL ++L N
Sbjct: 1461 PEFVLLFDTYKMKPWIIPIKLLIFHFYRNENISQSEKIDVNKKKNLPILANQKEYLELAN 1520
Query: 134 QEKNEEKT--NLVSDPSKQNKKKPLQKDY 54
KNE+++ +LVSD KQNKKK +++DY
Sbjct: 1521 SNKNEQQSQGDLVSDLRKQNKKKDIEEDY 1549
Score = 28.9 bits (63), Expect(2) = 1e-06
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -3
Query: 406 KKNNSNEKSFFDWMGMNRK 350
+K ++ +K FFDWMGMN++
Sbjct: 1428 QKPSNQKKYFFDWMGMNQE 1446
>ref|YP_007475677.1| hypothetical chloroplast RF19 [Heliconia collinsiana]
gi|449326156|gb|AGE92742.1| hypothetical chloroplast RF19
[Heliconia collinsiana]
Length = 1782
Score = 57.8 bits (138), Expect = 2e-06
Identities = 32/52 (61%), Positives = 41/52 (78%), Gaps = 4/52 (7%)
Frame = -2
Query: 194 KKKISQNKSVKDSILIKL--KNQEKNEEK--TNLVSDPSKQNKKKPLQKDYA 51
+K ISQNK++KDSI I+ NQ+KNEE+ +NLVSD KQN+KK L+KDYA
Sbjct: 1464 EKNISQNKNIKDSIKIEFLNSNQQKNEEEGQSNLVSDLRKQNQKKYLEKDYA 1515
>gb|AEX94024.1| hypothetical chloroplast RF19 (chloroplast) [Lomandra longifolia]
Length = 1763
Score = 43.5 bits (101), Expect(2) = 4e-06
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Frame = -2
Query: 293 PEFRFPFDTYKAYXXXXXXXXXXXXLS-NQNLDEKKKISQNKSVKDSILIKLK------- 138
PEF FD YK +N+ + +KI+ NK SIL K
Sbjct: 1400 PEFMLLFDAYKIKPWIIPIKLLIFHFHFYENISQSEKINVNKKQNISILANQKEYLDLEN 1459
Query: 137 --NQEKNEEKT--NLVSDPSKQNKKKPLQKDY 54
N++KNE++ N VSD KQNKKK +++DY
Sbjct: 1460 DSNKKKNEQQGQGNRVSDLQKQNKKKNVEEDY 1491
Score = 32.7 bits (73), Expect(2) = 4e-06
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -3
Query: 409 YKKNNSNEKSFFDWMGMNRKR 347
+K + +K+FFDWMGMN++R
Sbjct: 1366 HKNTKTKKKNFFDWMGMNQER 1386
>ref|YP_003434033.1| hypothetical chloroplast RF19 [Typha latifolia]
gi|281371830|gb|ADA63757.1| hypothetical chloroplast RF19
[Typha latifolia]
Length = 1835
Score = 46.6 bits (109), Expect(2) = 7e-06
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = -2
Query: 293 PEFRFPFDTYKAYXXXXXXXXXXXXLSNQNLDEKKKISQNKSVKDSILIKLKN--QEKNE 120
PEF FDTYK N ++ EKK S+N ++K +KL+N Q+KNE
Sbjct: 1482 PEFVLLFDTYKIKPWIIPIKLLLL---NSSIYEKKSQSKNINIKKKKYLKLENSNQQKNE 1538
Query: 119 EKT--NLVSDPSKQNKKKPLQKDY 54
++T N S K+NKKK +++DY
Sbjct: 1539 QQTQVNFRSYLRKENKKKYIEEDY 1562
Score = 28.9 bits (63), Expect(2) = 7e-06
Identities = 12/18 (66%), Positives = 15/18 (83%), Gaps = 1/18 (5%)
Frame = -3
Query: 400 NNSNEKS-FFDWMGMNRK 350
N SN+K FFDWMGMN++
Sbjct: 1450 NQSNKKKHFFDWMGMNQE 1467