BLASTX nr result

ID: Zingiber24_contig00019192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00019192
         (238 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332119.1| predicted protein [Populus trichocarpa] gi|5...    55   1e-05

>ref|XP_002332119.1| predicted protein [Populus trichocarpa]
           gi|566214115|ref|XP_006371817.1| DNA repair
           ATPase-related family protein [Populus trichocarpa]
           gi|118488228|gb|ABK95933.1| unknown [Populus
           trichocarpa] gi|550317990|gb|ERP49614.1| DNA repair
           ATPase-related family protein [Populus trichocarpa]
          Length = 447

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/74 (40%), Positives = 38/74 (51%)
 Frame = +2

Query: 2   VQVGIQEHLKKYELIKFLATKELVWFMASTLLVFPVFLAXXXXXXXXXXXXXXXXXXXHA 181
           VQV +QE L+K+EL K LA KEL+WF+AS LL  PV +                    HA
Sbjct: 374 VQVTVQETLEKHELTKPLAMKELIWFIASALLALPVIILARACSSIFCQKAKKPARNAHA 433

Query: 182 TRPHRKPKHRHAEK 223
               RK K  H++K
Sbjct: 434 NPSRRKAKRGHSDK 447


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