BLASTX nr result
ID: Zingiber24_contig00019029
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00019029
(501 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277679.1| PREDICTED: transcription initiation factor I... 80 2e-13
ref|XP_006660890.1| PREDICTED: transcription initiation factor I... 79 5e-13
ref|XP_004957467.1| PREDICTED: transcription initiation factor I... 79 5e-13
ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group] g... 79 5e-13
ref|XP_003578512.1| PREDICTED: transcription initiation factor I... 79 5e-13
ref|NP_001149721.1| transcription initiation factor IIB [Zea may... 79 5e-13
gb|ACF84713.1| unknown [Zea mays] 79 5e-13
gb|ACF81664.1| unknown [Zea mays] gi|414886465|tpg|DAA62479.1| T... 79 5e-13
gb|EMT25381.1| Transcription initiation factor IIB [Aegilops tau... 78 1e-12
dbj|BAK05040.1| predicted protein [Hordeum vulgare subsp. vulgare] 78 1e-12
ref|XP_002460572.1| hypothetical protein SORBIDRAFT_02g031020 [S... 78 1e-12
ref|XP_004493474.1| PREDICTED: transcription initiation factor I... 78 1e-12
ref|XP_004304334.1| PREDICTED: transcription initiation factor I... 78 1e-12
ref|NP_001238343.1| transcription initiation factor IIB [Glycine... 78 1e-12
ref|XP_003519077.1| PREDICTED: transcription initiation factor I... 78 1e-12
ref|XP_002269045.1| PREDICTED: transcription initiation factor I... 77 2e-12
emb|CAN74371.1| hypothetical protein VITISV_004775 [Vitis vinifera] 77 2e-12
ref|XP_006421304.1| hypothetical protein CICLE_v10005479mg [Citr... 77 3e-12
gb|EOY32739.1| Cyclin-like family protein [Theobroma cacao] 77 3e-12
gb|EMJ03476.1| hypothetical protein PRUPE_ppa008972mg [Prunus pe... 77 3e-12
>ref|XP_002277679.1| PREDICTED: transcription initiation factor IIB [Vitis vinifera]
gi|297734946|emb|CBI17180.3| unnamed protein product
[Vitis vinifera]
Length = 314
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYPYASRIIP+ YAKEEDL+NLCSP
Sbjct: 274 LATGVAEGTIRNSYKDLYPYASRIIPSSYAKEEDLRNLCSP 314
>ref|XP_006660890.1| PREDICTED: transcription initiation factor IIB-like [Oryza
brachyantha]
Length = 312
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYPYASR+IP YAKEEDLKNLC+P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312
>ref|XP_004957467.1| PREDICTED: transcription initiation factor IIB-like [Setaria
italica]
Length = 312
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYPYASR+IP YAKEEDLKNLC+P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312
>ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group]
gi|21362998|sp|Q8W0W3.1|TF2B_ORYSJ RecName:
Full=Transcription initiation factor IIB; AltName:
Full=General transcription factor TFIIB
gi|18481632|gb|AAL73491.1|AF464908_1 general
transcription factor TFIIB [Oryza sativa]
gi|50725809|dbj|BAD33339.1| Transcription initiation
factor IIB [Oryza sativa Japonica Group]
gi|50726577|dbj|BAD34211.1| Transcription initiation
factor IIB [Oryza sativa Japonica Group]
gi|113632008|dbj|BAF25689.1| Os09g0534800 [Oryza sativa
Japonica Group] gi|125564497|gb|EAZ09877.1| hypothetical
protein OsI_32170 [Oryza sativa Indica Group]
gi|125606444|gb|EAZ45480.1| hypothetical protein
OsJ_30135 [Oryza sativa Japonica Group]
gi|347737122|gb|AEP20532.1| transcription factor [Oryza
sativa Japonica Group]
Length = 312
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYPYASR+IP YAKEEDLKNLC+P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312
>ref|XP_003578512.1| PREDICTED: transcription initiation factor IIB-like [Brachypodium
distachyon]
Length = 312
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYPYASR+IP YAKEEDLKNLC+P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312
>ref|NP_001149721.1| transcription initiation factor IIB [Zea mays]
gi|195629762|gb|ACG36522.1| transcription initiation
factor IIB [Zea mays] gi|414590059|tpg|DAA40630.1| TPA:
transcription initiation factor IIB [Zea mays]
Length = 312
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYPYASR+IP YAKEEDLKNLC+P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312
>gb|ACF84713.1| unknown [Zea mays]
Length = 198
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYPYASR+IP YAKEEDLKNLC+P
Sbjct: 158 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 198
>gb|ACF81664.1| unknown [Zea mays] gi|414886465|tpg|DAA62479.1| TPA: hypothetical
protein ZEAMMB73_928076 [Zea mays]
gi|414886466|tpg|DAA62480.1| TPA: hypothetical protein
ZEAMMB73_928076 [Zea mays]
Length = 312
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYPYASR+IP YAKEEDLKNLC+P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312
>gb|EMT25381.1| Transcription initiation factor IIB [Aegilops tauschii]
Length = 198
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYPYA+R+IP YAKEEDLKNLC+P
Sbjct: 158 LATGVAEGTIRNSYKDLYPYAARLIPNSYAKEEDLKNLCTP 198
>dbj|BAK05040.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 312
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYPYA+R+IP YAKEEDLKNLC+P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYAARLIPNSYAKEEDLKNLCTP 312
>ref|XP_002460572.1| hypothetical protein SORBIDRAFT_02g031020 [Sorghum bicolor]
gi|241923949|gb|EER97093.1| hypothetical protein
SORBIDRAFT_02g031020 [Sorghum bicolor]
Length = 312
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYPYA+R+IP YAKEEDLKNLC+P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYAARLIPNTYAKEEDLKNLCTP 312
>ref|XP_004493474.1| PREDICTED: transcription initiation factor IIB-like [Cicer
arietinum]
Length = 312
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYP+ S+IIP +YAKEEDLKNLCSP
Sbjct: 272 LATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 312
>ref|XP_004304334.1| PREDICTED: transcription initiation factor IIB-like [Fragaria vesca
subsp. vesca]
Length = 312
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYP+ S+IIP +YAKEEDLKNLCSP
Sbjct: 272 LATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 312
>ref|NP_001238343.1| transcription initiation factor IIB [Glycine max]
gi|1351222|sp|P48513.1|TF2B_SOYBN RecName:
Full=Transcription initiation factor IIB; AltName:
Full=General transcription factor TFIIB
gi|945087|gb|AAB09756.1| transcription factor TFIIB
[Glycine max]
Length = 313
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYP+ S+IIP +YAKEEDLKNLCSP
Sbjct: 273 LATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 313
>ref|XP_003519077.1| PREDICTED: transcription initiation factor IIB-like [Glycine max]
Length = 314
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDLYP+ S+IIP +YAKEEDLKNLCSP
Sbjct: 274 LATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 314
>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
gi|296088031|emb|CBI35314.3| unnamed protein product
[Vitis vinifera]
Length = 312
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/41 (82%), Positives = 40/41 (97%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
+ATGVAEGTI+NSYKDLYP+ SRIIP++YAKEEDL+NLCSP
Sbjct: 272 IATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLCSP 312
>emb|CAN74371.1| hypothetical protein VITISV_004775 [Vitis vinifera]
Length = 312
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/41 (82%), Positives = 40/41 (97%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
+ATGVAEGTI+NSYKDLYP+ SRIIP++YAKEEDL+NLCSP
Sbjct: 272 IATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLCSP 312
>ref|XP_006421304.1| hypothetical protein CICLE_v10005479mg [Citrus clementina]
gi|568880032|ref|XP_006492943.1| PREDICTED:
transcription initiation factor IIB-2-like [Citrus
sinensis] gi|557523177|gb|ESR34544.1| hypothetical
protein CICLE_v10005479mg [Citrus clementina]
Length = 312
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
+ATGVAEGTI+NSYKDLYP+ S+IIP +YAKEEDLKNLCSP
Sbjct: 272 VATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 312
>gb|EOY32739.1| Cyclin-like family protein [Theobroma cacao]
Length = 312
Score = 76.6 bits (187), Expect = 3e-12
Identities = 33/41 (80%), Positives = 41/41 (100%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
LATGVAEGTI+NSYKDL+P+AS+++P++YAKEEDLKNLCSP
Sbjct: 272 LATGVAEGTIRNSYKDLHPHASKLVPSWYAKEEDLKNLCSP 312
>gb|EMJ03476.1| hypothetical protein PRUPE_ppa008972mg [Prunus persica]
Length = 312
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = -1
Query: 501 LATGVAEGTIKNSYKDLYPYASRIIPTFYAKEEDLKNLCSP 379
+ATGVAEGTI+NSYKDLYP+ S+IIP +YAKEEDLKNLCSP
Sbjct: 272 VATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 312