BLASTX nr result
ID: Zingiber24_contig00018832
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00018832
(288 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group] g... 73 4e-11
emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group] 73 4e-11
gb|EMT02140.1| Pentatricopeptide repeat-containing protein [Aegi... 72 8e-11
dbj|BAJ90949.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 8e-11
ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [S... 71 1e-10
ref|XP_006653269.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|XP_004964414.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 70 4e-10
gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays] 69 5e-10
gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays] 69 5e-10
ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea ma... 69 5e-10
ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containi... 69 6e-10
gb|ESW25758.1| hypothetical protein PHAVU_003G063200g [Phaseolus... 67 2e-09
ref|XP_006302183.1| hypothetical protein CARUB_v10020193mg [Caps... 67 2e-09
ref|XP_002324293.2| hypothetical protein POPTR_0018s05820g [Popu... 66 4e-09
ref|XP_004509657.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_006392119.1| hypothetical protein EUTSA_v10023426mg [Eutr... 65 9e-09
ref|XP_002886593.1| pentatricopeptide repeat-containing protein ... 65 9e-09
ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|5... 65 9e-09
ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_004296672.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
>ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza
sativa Japonica Group] gi|38344779|emb|CAE01505.2|
OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa
Japonica Group] gi|125543501|gb|EAY89640.1| hypothetical
protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein
OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 524
Score = 72.8 bits (177), Expect = 4e-11
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSI 160
+L+KVQKDLG VFE L+RTYA AG K PG+R RLK+ENV VS +T KLLDS+
Sbjct: 468 VLKKVQKDLGTVVFEPLVRTYAAAGKKLPGMRHRLKIENVEVSEETAKLLDSV 520
>emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 72.8 bits (177), Expect = 4e-11
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSI 160
+L+KVQKDLG VFE L+RTYA AG K PG+R RLK+ENV VS +T KLLDS+
Sbjct: 468 VLKKVQKDLGTVVFEPLVRTYAAAGKKLPGMRHRLKIENVEVSEETAKLLDSV 520
>gb|EMT02140.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 480
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSI 160
+L+KVQKDLG VFE L+RTYA AG K PG+R RLK+ENV +S +T+KL+DSI
Sbjct: 425 VLKKVQKDLGTVVFEPLVRTYAAAGKKFPGMRHRLKIENVELSEETDKLVDSI 477
>dbj|BAJ90949.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 200
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSI 160
+L+KVQKDLG VFE L+RTYA AG K PG+R RLK+ENV +S +T+KL+DSI
Sbjct: 145 VLKKVQKDLGTVVFEPLVRTYAAAGKKFPGMRHRLKIENVELSEETDKLVDSI 197
>ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein
SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/52 (67%), Positives = 43/52 (82%)
Frame = +2
Query: 5 LQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSI 160
L+KVQKDLG VFE L+RTYA AG K PG+R+RLK+ENV V +T++LLDSI
Sbjct: 481 LKKVQKDLGTPVFEPLLRTYAAAGKKFPGMRQRLKIENVEVGEETDQLLDSI 532
>ref|XP_006653269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Oryza brachyantha]
Length = 449
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +2
Query: 5 LQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSI 160
L+ V+KDLG VFESLIRTYA AG K PG+R RLK+ENV VS +T KLLDS+
Sbjct: 394 LKHVKKDLGAVVFESLIRTYAAAGKKLPGMRHRLKIENVEVSEETAKLLDSV 445
>ref|XP_004964414.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Setaria italica]
Length = 487
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSI 160
+L+KVQKDLG VFE L+RTYA AG K PG+R+RLK+ENV V + KLLDSI
Sbjct: 431 VLKKVQKDLGTLVFEPLVRTYAAAGKKFPGMRQRLKIENVEVGEEAAKLLDSI 483
>gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/52 (67%), Positives = 41/52 (78%)
Frame = +2
Query: 5 LQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSI 160
L+KVQKDLG VFE L+RTYA AG K PG+R+RLK+ENV V T +LLDSI
Sbjct: 571 LKKVQKDLGAPVFEPLVRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLLDSI 622
>gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/52 (67%), Positives = 41/52 (78%)
Frame = +2
Query: 5 LQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSI 160
L+KVQKDLG VFE L+RTYA AG K PG+R+RLK+ENV V T +LLDSI
Sbjct: 541 LKKVQKDLGAPVFEPLVRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLLDSI 592
>ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/52 (67%), Positives = 41/52 (78%)
Frame = +2
Query: 5 LQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSI 160
L+KVQKDLG VFE L+RTYA AG K PG+R+RLK+ENV V T +LLDSI
Sbjct: 481 LKKVQKDLGAPVFEPLVRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLLDSI 532
>ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSI 160
+L+KVQKDLG VFE L+RTYA AG K PG+R RLK+ENV VS + KL+DS+
Sbjct: 481 VLKKVQKDLGTVVFEPLVRTYAAAGKKFPGMRHRLKIENVEVSEEIAKLVDSL 533
>gb|ESW25758.1| hypothetical protein PHAVU_003G063200g [Phaseolus vulgaris]
Length = 489
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSISNE 169
+++K LG EVFESLIRTYA AG S ++RRLKMENV VS DT+KLL++IS E
Sbjct: 434 IVKKSMDSLGAEVFESLIRTYAAAGRTSSAMQRRLKMENVEVSEDTQKLLEAISVE 489
>ref|XP_006302183.1| hypothetical protein CARUB_v10020193mg [Capsella rubella]
gi|482570893|gb|EOA35081.1| hypothetical protein
CARUB_v10020193mg [Capsella rubella]
Length = 491
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSISNE 169
+L+KV +G E+FE LIRTYA AG P +RRRLKMENV V+ T+KLLD +S E
Sbjct: 435 ILKKVTDKIGAEIFEPLIRTYAAAGRSHPAMRRRLKMENVEVNEATKKLLDEVSQE 490
>ref|XP_002324293.2| hypothetical protein POPTR_0018s05820g [Populus trichocarpa]
gi|550318118|gb|EEF02858.2| hypothetical protein
POPTR_0018s05820g [Populus trichocarpa]
Length = 490
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSISNE 169
+L+K D+ EVFESLIRTYA AG KS +RRRLKMENV VS D EKLL++I E
Sbjct: 435 ILKKAVDDVAVEVFESLIRTYAVAGRKSQMMRRRLKMENVEVSDDCEKLLEAICVE 490
>ref|XP_004509657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like isoform X1 [Cicer arietinum]
Length = 490
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSISNE 169
+L+K +G EVFESLIRTYA AG S ++RRLKMENV V+ DT+KLL++IS E
Sbjct: 435 ILKKSVDSVGAEVFESLIRTYATAGKTSSSLQRRLKMENVNVNEDTQKLLEAISVE 490
>ref|XP_006392119.1| hypothetical protein EUTSA_v10023426mg [Eutrema salsugineum]
gi|557088625|gb|ESQ29405.1| hypothetical protein
EUTSA_v10023426mg [Eutrema salsugineum]
Length = 491
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSISNE 169
+L+K + D+G E+FE+LIR YA AG P +RRRLKMENV V+ T+KLLD I E
Sbjct: 435 ILKKGKDDVGTEIFETLIRIYAAAGKSPPAMRRRLKMENVEVNEATQKLLDEICQE 490
>ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297332434|gb|EFH62852.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 491
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSISNE 169
+L+ ++G E+FESLIRTYA AG P +RRRLKMENV V+ T+KLLD +S E
Sbjct: 435 ILKNGTDNIGAEIFESLIRTYAAAGKSHPAMRRRLKMENVEVNEVTKKLLDEVSQE 490
>ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|566176699|ref|XP_006381714.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus
trichocarpa] gi|550336465|gb|ERP59511.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 490
Score = 65.1 bits (157), Expect = 9e-09
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSISNE 169
+L+K D+ EVFESLIRTYA AG KS +RRRLKMENV VS D +KLL++I E
Sbjct: 435 ILKKAVDDVAVEVFESLIRTYAAAGRKSQLMRRRLKMENVEVSDDCQKLLEAICVE 490
>ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/56 (60%), Positives = 41/56 (73%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSISNE 169
+L+ +DLG EVFESLIR YA AG SP +RRRLKMENV VS +KLL+ +S E
Sbjct: 434 ILKSTVEDLGVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCKKLLEEVSVE 489
>ref|XP_004296672.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Fragaria vesca subsp. vesca]
Length = 490
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 2 LLQKVQKDLGPEVFESLIRTYANAGMKSPGIRRRLKMENVVVSSDTEKLLDSISNE 169
+L+K + LG EVFESLI+TYA AG +P +R RLKMENV VS ++KLL+SI E
Sbjct: 435 ILKKATESLGAEVFESLIKTYAAAGKTTPAMRHRLKMENVEVSEASKKLLESICVE 490