BLASTX nr result

ID: Zingiber24_contig00018546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00018546
         (486 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW59466.1| hypothetical protein ZEAMMB73_490689 [Zea mays]         99   4e-19
ref|NP_001169245.1| hypothetical protein [Zea mays] gi|223975761...    99   4e-19
ref|XP_004976825.1| PREDICTED: probable UDP-arabinose 4-epimeras...    96   4e-18
gb|ACN27984.1| unknown [Zea mays] gi|414585426|tpg|DAA35997.1| T...    94   2e-17
ref|NP_001147087.1| LOC100280696 [Zea mays] gi|195607132|gb|ACG2...    94   2e-17
ref|XP_006845984.1| hypothetical protein AMTR_s00155p00032400 [A...    93   3e-17
dbj|BAK01474.1| predicted protein [Hordeum vulgare subsp. vulgare]     92   5e-17
ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Viti...    90   3e-16
ref|XP_006356905.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...    89   8e-16
gb|EOY25603.1| NAD(P)-binding Rossmann-fold superfamily protein ...    88   1e-15
ref|XP_006353041.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...    87   2e-15
ref|XP_004233190.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...    87   2e-15
ref|XP_004233189.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...    87   2e-15
gb|EMJ12947.1| hypothetical protein PRUPE_ppa006315mg [Prunus pe...    86   5e-15
gb|ACJ11755.1| UDP-D-xylose 4-epimerase [Gossypium hirsutum]           85   9e-15
ref|XP_002529901.1| UDP-glucose 4-epimerase, putative [Ricinus c...    85   1e-14
ref|XP_004158661.1| PREDICTED: LOW QUALITY PROTEIN: UDP-arabinos...    84   1e-14
ref|XP_004134548.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...    84   2e-14
ref|XP_006468378.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...    84   3e-14
ref|XP_006448811.1| hypothetical protein CICLE_v10015404mg [Citr...    84   3e-14

>gb|AFW59466.1| hypothetical protein ZEAMMB73_490689 [Zea mays]
          Length = 140

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 47/69 (68%), Positives = 56/69 (81%)
 Frame = -2

Query: 209 RSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGPSVFSR 30
           RSRSQ R +RPW LSGMD ++SRR+    GK+A+A  LT +CI++LKQSPSFSG SVFSR
Sbjct: 6   RSRSQARTTRPWILSGMDFADSRRKPNFTGKIAVAAALTVMCIIVLKQSPSFSGTSVFSR 65

Query: 29  HEAGVTHVL 3
           HE GVTHVL
Sbjct: 66  HETGVTHVL 74


>ref|NP_001169245.1| hypothetical protein [Zea mays] gi|223975761|gb|ACN32068.1| unknown
           [Zea mays] gi|413919533|gb|AFW59465.1| hypothetical
           protein ZEAMMB73_490689 [Zea mays]
          Length = 415

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 47/69 (68%), Positives = 56/69 (81%)
 Frame = -2

Query: 209 RSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGPSVFSR 30
           RSRSQ R +RPW LSGMD ++SRR+    GK+A+A  LT +CI++LKQSPSFSG SVFSR
Sbjct: 6   RSRSQARTTRPWILSGMDFADSRRKPNFTGKIAVAAALTVMCIIVLKQSPSFSGTSVFSR 65

Query: 29  HEAGVTHVL 3
           HE GVTHVL
Sbjct: 66  HETGVTHVL 74


>ref|XP_004976825.1| PREDICTED: probable UDP-arabinose 4-epimerase 2-like [Setaria
           italica]
          Length = 414

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 47/74 (63%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
 Frame = -2

Query: 221 LPAN-RSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           +PA  RSRSQ R +RPW L GMD +++RR+    GK+A+A  LT +CI++LKQSPSFSG 
Sbjct: 1   MPATPRSRSQARTTRPWILPGMDFTDTRRKPNFTGKIAVAAALTVMCIIVLKQSPSFSGT 60

Query: 44  SVFSRHEAGVTHVL 3
           SVFSRHE GVTHVL
Sbjct: 61  SVFSRHEIGVTHVL 74


>gb|ACN27984.1| unknown [Zea mays] gi|414585426|tpg|DAA35997.1| TPA: UDP-arabinose
           4-epimerase 2 [Zea mays]
          Length = 416

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 47/70 (67%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
 Frame = -2

Query: 209 RSRSQ-PRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGPSVFS 33
           RSRSQ  R +RPW LSGMD + SRR+  + GK+A+A  LT +CI++LKQSPSFSG SVFS
Sbjct: 6   RSRSQGSRTTRPWILSGMDFAGSRRKPNLTGKIAVAAALTVMCIIVLKQSPSFSGTSVFS 65

Query: 32  RHEAGVTHVL 3
           RHE GVTHVL
Sbjct: 66  RHETGVTHVL 75


>ref|NP_001147087.1| LOC100280696 [Zea mays] gi|195607132|gb|ACG25396.1| UDP-arabinose
           4-epimerase 2 [Zea mays]
          Length = 416

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 47/70 (67%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
 Frame = -2

Query: 209 RSRSQ-PRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGPSVFS 33
           RSRSQ  R +RPW LSGMD + SRR+  + GK+A+A  LT +CI++LKQSPSFSG SVFS
Sbjct: 6   RSRSQGSRTTRPWILSGMDFAGSRRKPNLTGKIAVAAALTVMCIIVLKQSPSFSGTSVFS 65

Query: 32  RHEAGVTHVL 3
           RHE GVTHVL
Sbjct: 66  RHETGVTHVL 75


>ref|XP_006845984.1| hypothetical protein AMTR_s00155p00032400 [Amborella trichopoda]
           gi|548848740|gb|ERN07659.1| hypothetical protein
           AMTR_s00155p00032400 [Amborella trichopoda]
          Length = 417

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 44/74 (59%), Positives = 56/74 (75%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           MLP+ R+R+Q R+SR W  SGMD  +SRR+   +GK+ +A  LTALCI +L+QS SF G 
Sbjct: 1   MLPSARNRAQSRSSRSWSFSGMDYGDSRRKPHFVGKVLLAGFLTALCIFMLRQSSSFDGT 60

Query: 44  SVFSRHEAGVTHVL 3
           +VFSRHE GVTHVL
Sbjct: 61  NVFSRHEDGVTHVL 74


>dbj|BAK01474.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 412

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 44/69 (63%), Positives = 52/69 (75%)
 Frame = -2

Query: 209 RSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGPSVFSR 30
           RSRSQ R +R W LSGMD  ++RR+    GK+A+A  LT +CIL+LKQSP F G SVFSR
Sbjct: 6   RSRSQARTTRSWILSGMDFGDTRRKPNFAGKIAVAAALTVMCILVLKQSPGFGGTSVFSR 65

Query: 29  HEAGVTHVL 3
           HE GVTHVL
Sbjct: 66  HETGVTHVL 74


>ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera]
           gi|297740899|emb|CBI31081.3| unnamed protein product
           [Vitis vinifera]
          Length = 418

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 43/74 (58%), Positives = 56/74 (75%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   RSR+QPR SR  P  GM+ ++ +R+S ++GK+ +A  LTALCIL+LKQS +F+ P
Sbjct: 1   MLNFTRSRNQPRPSRSMPFGGMEYADPKRKSNVVGKILLAATLTALCILMLKQSSNFNTP 60

Query: 44  SVFSRHEAGVTHVL 3
           S FSRHE GVTHVL
Sbjct: 61  SPFSRHEPGVTHVL 74


>ref|XP_006356905.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Solanum tuberosum]
          Length = 418

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/74 (55%), Positives = 57/74 (77%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   R+R+QPR++R  PL  MD ++ ++++  +GK+ MA +LTALCIL+LKQSP F+ P
Sbjct: 1   MLNLVRTRTQPRSNRSMPLVAMDYADPKKKNNFVGKILMAAILTALCILMLKQSPDFNPP 60

Query: 44  SVFSRHEAGVTHVL 3
           + FSRHE GVTHVL
Sbjct: 61  TAFSRHEPGVTHVL 74


>gb|EOY25603.1| NAD(P)-binding Rossmann-fold superfamily protein isoform 1
           [Theobroma cacao] gi|508778348|gb|EOY25604.1|
           NAD(P)-binding Rossmann-fold superfamily protein isoform
           1 [Theobroma cacao]
          Length = 412

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 42/74 (56%), Positives = 55/74 (74%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   R R QPR++R  P +GMD  + +R+S  +GK+ +A  LTALCI++LKQSP+FS P
Sbjct: 1   MLNFARGRIQPRSTRSMPFAGMDYPDPKRKSNFVGKILLAATLTALCIIMLKQSPTFSTP 60

Query: 44  SVFSRHEAGVTHVL 3
           S FS+HE GVTHVL
Sbjct: 61  SRFSQHEEGVTHVL 74


>ref|XP_006353041.1| PREDICTED: UDP-arabinose 4-epimerase 1-like isoform X1 [Solanum
           tuberosum] gi|565372938|ref|XP_006353042.1| PREDICTED:
           UDP-arabinose 4-epimerase 1-like isoform X2 [Solanum
           tuberosum]
          Length = 417

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/74 (55%), Positives = 56/74 (75%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   R+R+Q R+SR   L GMD ++ +++S  +GK+ MA +LTALCIL+LKQSP+F+ P
Sbjct: 1   MLGLGRTRAQTRSSRSMSLGGMDYADPKKKSNFVGKILMAAVLTALCILMLKQSPTFNTP 60

Query: 44  SVFSRHEAGVTHVL 3
           S FSRH+ GV HVL
Sbjct: 61  SAFSRHQPGVIHVL 74


>ref|XP_004233190.1| PREDICTED: UDP-arabinose 4-epimerase 1-like isoform 2 [Solanum
           lycopersicum]
          Length = 417

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/74 (55%), Positives = 55/74 (74%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   R R+Q R+SR   L GMD ++ +++S  +GK+ MA +LTALCIL+LKQSP+F+ P
Sbjct: 1   MLGLGRGRAQTRSSRSMSLGGMDYADPKKKSNFVGKILMAAVLTALCILMLKQSPTFNTP 60

Query: 44  SVFSRHEAGVTHVL 3
           S FSRH+ GV HVL
Sbjct: 61  SAFSRHQPGVVHVL 74


>ref|XP_004233189.1| PREDICTED: UDP-arabinose 4-epimerase 1-like isoform 1 [Solanum
           lycopersicum]
          Length = 417

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/74 (55%), Positives = 55/74 (74%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   R R+Q R+SR   L GMD ++ +++S  +GK+ MA +LTALCIL+LKQSP+F+ P
Sbjct: 1   MLGLGRGRAQTRSSRSMSLGGMDYADPKKKSNFVGKILMAAVLTALCILMLKQSPTFNTP 60

Query: 44  SVFSRHEAGVTHVL 3
           S FSRH+ GV HVL
Sbjct: 61  SAFSRHQPGVVHVL 74


>gb|EMJ12947.1| hypothetical protein PRUPE_ppa006315mg [Prunus persica]
           gi|464895971|gb|AGH25534.1| UDP-D-xylose 4-epimerase
           [Prunus persica]
          Length = 417

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 41/74 (55%), Positives = 55/74 (74%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   R+RSQ R +R   L GMD  + +R++  +GK+ +A  LTALCI++LKQSPSF+ P
Sbjct: 1   MLNFGRARSQSRTNRSMSLGGMDYPDPKRKNNFVGKILLAATLTALCIIMLKQSPSFNTP 60

Query: 44  SVFSRHEAGVTHVL 3
           S+FS HE+GVTHVL
Sbjct: 61  SMFSLHESGVTHVL 74


>gb|ACJ11755.1| UDP-D-xylose 4-epimerase [Gossypium hirsutum]
          Length = 413

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 42/74 (56%), Positives = 54/74 (72%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   R RSQPR++R  PLSGM+  + +R+S  +GK+ MA  LTALCI++LKQSP+F+  
Sbjct: 1   MLNFARGRSQPRSTRSMPLSGMEYPDPKRKSNFVGKILMAATLTALCIIMLKQSPNFNTR 60

Query: 44  SVFSRHEAGVTHVL 3
           S FS HE GV HVL
Sbjct: 61  SRFSEHEEGVIHVL 74


>ref|XP_002529901.1| UDP-glucose 4-epimerase, putative [Ricinus communis]
           gi|223530628|gb|EEF32504.1| UDP-glucose 4-epimerase,
           putative [Ricinus communis]
          Length = 417

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/74 (52%), Positives = 56/74 (75%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   R+R+Q R +R  PL+G+D ++ +R+S ++GK+ +A  LTALCI++LKQSP+F+ P
Sbjct: 1   MLNFGRARNQQRTNRSMPLAGLDYADPKRKSNVVGKIILAAALTALCIIMLKQSPTFNTP 60

Query: 44  SVFSRHEAGVTHVL 3
           S FS HE GV HVL
Sbjct: 61  SPFSLHEDGVVHVL 74


>ref|XP_004158661.1| PREDICTED: LOW QUALITY PROTEIN: UDP-arabinose 4-epimerase 1-like
           [Cucumis sativus]
          Length = 412

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 41/74 (55%), Positives = 53/74 (71%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   RSR+QPR++R   L GMD S+ +R+  ++GK  +A  LTALCI++LKQSP+FS P
Sbjct: 1   MLNFGRSRTQPRSNRSLSLGGMDYSDPKRKXNVVGKFILAATLTALCIIMLKQSPAFSAP 60

Query: 44  SVFSRHEAGVTHVL 3
           S F   E GVTHVL
Sbjct: 61  SQFGVREPGVTHVL 74


>ref|XP_004134548.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis sativus]
          Length = 412

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 40/74 (54%), Positives = 54/74 (72%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   RSR+QPR++R   L GMD S+ ++++ ++GK  +A  LTALCI++LKQSP+FS P
Sbjct: 1   MLNFGRSRTQPRSNRSLSLGGMDYSDPKKKNNVVGKFILAATLTALCIIMLKQSPAFSAP 60

Query: 44  SVFSRHEAGVTHVL 3
           S F   E GVTHVL
Sbjct: 61  SQFGVREPGVTHVL 74


>ref|XP_006468378.1| PREDICTED: UDP-arabinose 4-epimerase 1-like isoform X1 [Citrus
           sinensis] gi|568828092|ref|XP_006468379.1| PREDICTED:
           UDP-arabinose 4-epimerase 1-like isoform X2 [Citrus
           sinensis] gi|568828094|ref|XP_006468380.1| PREDICTED:
           UDP-arabinose 4-epimerase 1-like isoform X3 [Citrus
           sinensis] gi|568828096|ref|XP_006468381.1| PREDICTED:
           UDP-arabinose 4-epimerase 1-like isoform X4 [Citrus
           sinensis]
          Length = 413

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   R+R+Q R +RP    G+D ++ +R+S   GK  +A  LTALCI +LKQSP+FS P
Sbjct: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60

Query: 44  SVFSRHEAGVTHVL 3
           S FS+HE GVTHVL
Sbjct: 61  SPFSQHEEGVTHVL 74


>ref|XP_006448811.1| hypothetical protein CICLE_v10015404mg [Citrus clementina]
           gi|557551422|gb|ESR62051.1| hypothetical protein
           CICLE_v10015404mg [Citrus clementina]
          Length = 413

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = -2

Query: 224 MLPANRSRSQPRASRPWPLSGMDNSESRRRSQIIGKLAMAFMLTALCILILKQSPSFSGP 45
           ML   R+R+Q R +RP    G+D ++ +R+S   GK  +A  LTALCI +LKQSP+FS P
Sbjct: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60

Query: 44  SVFSRHEAGVTHVL 3
           S FS+HE GVTHVL
Sbjct: 61  SPFSQHEEGVTHVL 74


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