BLASTX nr result
ID: Zingiber24_contig00018475
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00018475
(317 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006342357.1| PREDICTED: 40S ribosomal protein S3-2-like [... 69 6e-10
ref|XP_006657946.1| PREDICTED: 40S ribosomal protein S3-1-like [... 67 2e-09
ref|XP_004243723.1| PREDICTED: 40S ribosomal protein S3-3-like [... 67 2e-09
gb|EXC04962.1| 40S ribosomal protein S3-3 [Morus notabilis] 67 3e-09
gb|EMJ18016.1| hypothetical protein PRUPE_ppa023112mg [Prunus pe... 66 4e-09
ref|XP_003619403.1| 40S ribosomal protein S3 [Medicago truncatul... 66 4e-09
gb|AGV54411.1| 40S ribosomal protein S3-3-like protein [Phaseolu... 65 7e-09
gb|EXB38920.1| 40S ribosomal protein S3-3 [Morus notabilis] 64 2e-08
ref|XP_002318635.1| hypothetical protein POPTR_0012s07830g [Popu... 64 3e-08
ref|XP_006854617.1| hypothetical protein AMTR_s00030p00157370 [A... 63 4e-08
gb|EMS62171.1| 40S ribosomal protein S3-3 [Triticum urartu] 63 4e-08
ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [... 63 4e-08
ref|XP_003548259.1| PREDICTED: 40S ribosomal protein S3-3 [Glyci... 63 4e-08
gb|ACU19000.1| unknown [Glycine max] 63 4e-08
ref|XP_002322150.1| 40S ribosomal protein S3 [Populus trichocarp... 63 4e-08
ref|XP_003535986.1| PREDICTED: 40S ribosomal protein S3-3 [Glyci... 63 5e-08
ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatul... 63 5e-08
ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatul... 63 5e-08
ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [... 63 5e-08
ref|NP_001235326.1| uncharacterized protein LOC100499737 [Glycin... 63 5e-08
>ref|XP_006342357.1| PREDICTED: 40S ribosomal protein S3-2-like [Solanum tuberosum]
Length = 239
Score = 68.9 bits (167), Expect = 6e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPAEM 205
PKGKQGPTTPLPDLVTIHPPK+EEEYMR +V P E+
Sbjct: 197 PKGKQGPTTPLPDLVTIHPPKEEEEYMRLSVAAPVEI 233
>ref|XP_006657946.1| PREDICTED: 40S ribosomal protein S3-1-like [Oryza brachyantha]
Length = 232
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPAEMPIA 196
PKGKQGPTTPLPDLVTIH PKDE+EY +P +PAE+P+A
Sbjct: 196 PKGKQGPTTPLPDLVTIHAPKDEDEYSKP---LPAEIPVA 232
>ref|XP_004243723.1| PREDICTED: 40S ribosomal protein S3-3-like [Solanum lycopersicum]
Length = 239
Score = 67.0 bits (162), Expect = 2e-09
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPAEM 205
PKGKQGPTTPLPDLVTIHPPK+EEEY+R V P E+
Sbjct: 197 PKGKQGPTTPLPDLVTIHPPKEEEEYLRLPVAAPVEI 233
>gb|EXC04962.1| 40S ribosomal protein S3-3 [Morus notabilis]
Length = 282
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPAEMP 202
PKGKQGPTTPLPD+VTIHPPKDE+EY+RP+ V A++P
Sbjct: 194 PKGKQGPTTPLPDVVTIHPPKDEDEYLRPS-FVAADVP 230
>gb|EMJ18016.1| hypothetical protein PRUPE_ppa023112mg [Prunus persica]
Length = 113
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPAEM 205
PKGKQGPTTPLPDLVTIH PK+EE+Y+RP+V+ AE+
Sbjct: 67 PKGKQGPTTPLPDLVTIHQPKEEEDYIRPSVVAAAEI 103
>ref|XP_003619403.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|357498233|ref|XP_003619405.1| 40S ribosomal protein
S3 [Medicago truncatula] gi|355494418|gb|AES75621.1| 40S
ribosomal protein S3 [Medicago truncatula]
gi|355494420|gb|AES75623.1| 40S ribosomal protein S3
[Medicago truncatula]
Length = 235
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/41 (75%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRP-AVLVPAEMPIA 196
PKGKQGP TPLPD+VTIH PKDEEEY RP AV+ P +PIA
Sbjct: 194 PKGKQGPKTPLPDIVTIHTPKDEEEYTRPAAVVAPLPVPIA 234
>gb|AGV54411.1| 40S ribosomal protein S3-3-like protein [Phaseolus vulgaris]
gi|561018532|gb|ESW17336.1| hypothetical protein
PHAVU_007G231200g [Phaseolus vulgaris]
Length = 235
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/42 (69%), Positives = 36/42 (85%), Gaps = 2/42 (4%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPA--EMPIA 196
PKGKQGP TPLPD+VTIHPPK+EEEY+RPA ++ E+P+A
Sbjct: 194 PKGKQGPKTPLPDIVTIHPPKEEEEYIRPAPVLATDIEVPVA 235
>gb|EXB38920.1| 40S ribosomal protein S3-3 [Morus notabilis]
Length = 323
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/40 (70%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPA-VLVPAEMPI 199
PKGKQGPTTPLPD+VTIHPPK+E+EY+R A +L PA++ +
Sbjct: 277 PKGKQGPTTPLPDVVTIHPPKEEDEYLRSAPLLAPADIDL 316
>ref|XP_002318635.1| hypothetical protein POPTR_0012s07830g [Populus trichocarpa]
gi|222859308|gb|EEE96855.1| hypothetical protein
POPTR_0012s07830g [Populus trichocarpa]
Length = 178
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPAEMPIA 196
PKGK GP TPLPDLVTIHPPK+EEEY+ P + E+P+A
Sbjct: 139 PKGKVGPMTPLPDLVTIHPPKEEEEYVPPVMTTNIEIPVA 178
>ref|XP_006854617.1| hypothetical protein AMTR_s00030p00157370 [Amborella trichopoda]
gi|548858303|gb|ERN16084.1| hypothetical protein
AMTR_s00030p00157370 [Amborella trichopoda]
Length = 233
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLV 217
PKGKQGPTTPLPDLVTIH PK+EEEY RP ++V
Sbjct: 194 PKGKQGPTTPLPDLVTIHTPKEEEEYARPPLMV 226
>gb|EMS62171.1| 40S ribosomal protein S3-3 [Triticum urartu]
Length = 230
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/40 (70%), Positives = 35/40 (87%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPAEMPIA 196
PKGKQGP+TPLPDLVTIHPPKDE+E++RP + AE+ +A
Sbjct: 194 PKGKQGPSTPLPDLVTIHPPKDEDEFLRP---LAAEIAVA 230
>ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 235
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/42 (69%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPA--EMPIA 196
PKGKQGP TPLPDLVTIH PK+EEEY RPA ++ E+P+A
Sbjct: 194 PKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATDIEVPVA 235
>ref|XP_003548259.1| PREDICTED: 40S ribosomal protein S3-3 [Glycine max]
Length = 236
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/42 (69%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPA--EMPIA 196
PKGKQGP TPLPDLVTIH PK+EEEY RPA ++ E+P+A
Sbjct: 194 PKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATNIEVPVA 235
>gb|ACU19000.1| unknown [Glycine max]
Length = 236
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/42 (69%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPA--EMPIA 196
PKGKQGP TPLPDLVTIH PK+EEEY RPA ++ E+P+A
Sbjct: 194 PKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATNIEVPVA 235
>ref|XP_002322150.1| 40S ribosomal protein S3 [Populus trichocarpa]
gi|222869146|gb|EEF06277.1| 40S ribosomal protein S3
[Populus trichocarpa]
Length = 233
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPAEMPIA 196
PKGK GP TPLPDLVTIHPPK+EEEY+ P + E+P+A
Sbjct: 194 PKGKVGPMTPLPDLVTIHPPKEEEEYVPPLLTTNIEIPVA 233
>ref|XP_003535986.1| PREDICTED: 40S ribosomal protein S3-3 [Glycine max]
Length = 236
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/43 (67%), Positives = 36/43 (83%), Gaps = 3/43 (6%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPA---EMPIA 196
PKGKQGP TPLPDLVTIH PK+EEEY++PA ++ A E+P+A
Sbjct: 194 PKGKQGPKTPLPDLVTIHSPKEEEEYIQPAPVLAANDIEVPVA 236
>ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355504208|gb|AES85411.1| 40S ribosomal protein S3
[Medicago truncatula]
Length = 239
Score = 62.8 bits (151), Expect = 5e-08
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPAEMPI 199
PKGKQGP TPLPD+VTIH PK+EEEY+RPA +V ++ +
Sbjct: 194 PKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEV 232
>ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355478377|gb|AES59580.1| 40S ribosomal protein S3
[Medicago truncatula]
Length = 239
Score = 62.8 bits (151), Expect = 5e-08
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPAEMPI 199
PKGKQGP TPLPD+VTIH PK+EEEY+RPA +V ++ +
Sbjct: 194 PKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEV 232
>ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [Vitis vinifera]
gi|296081703|emb|CBI20708.3| unnamed protein product
[Vitis vinifera]
Length = 235
Score = 62.8 bits (151), Expect = 5e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPAEMP 202
PKGKQGPTTPLPDLVTIH PK+EEEY+ P + E+P
Sbjct: 194 PKGKQGPTTPLPDLVTIHTPKEEEEYVPPVLTTNIEVP 231
>ref|NP_001235326.1| uncharacterized protein LOC100499737 [Glycine max]
gi|255626187|gb|ACU13438.1| unknown [Glycine max]
Length = 236
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/43 (67%), Positives = 36/43 (83%), Gaps = 3/43 (6%)
Frame = -3
Query: 315 PKGKQGPTTPLPDLVTIHPPKDEEEYMRPAVLVPA---EMPIA 196
PKGKQGP TPLPDLVTIH PK+EEEY++PA ++ A E+P+A
Sbjct: 194 PKGKQGPKTPLPDLVTIHSPKEEEEYIQPAPVLAANDIEVPVA 236