BLASTX nr result

ID: Zingiber24_contig00018442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00018442
         (237 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307256.2| hypothetical protein POPTR_0005s18010g [Popu...    60   4e-07

>ref|XP_002307256.2| hypothetical protein POPTR_0005s18010g [Populus trichocarpa]
           gi|550339208|gb|EEE94252.2| hypothetical protein
           POPTR_0005s18010g [Populus trichocarpa]
          Length = 1348

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = +3

Query: 6   VVLPLEIEIHGKTNYSDGSGLITLDIEAFEPLDVMKAVVI-ISLTNHGADLLRLVSIELT 182
           V++PLE+E  GK  YS  +GL+++ +E   P DV   VV+ ISL N    +L +V++   
Sbjct: 473 VMVPLELEWDGKVAYSGFAGLVSVSLETLVPYDVGSTVVVAISLRNEAPHVLNVVNVREV 532

Query: 183 DGLDLFTVRYKEGFLLFP 236
             +  F ++Y EG LLFP
Sbjct: 533 AAVKAFQIKYIEGLLLFP 550


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