BLASTX nr result
ID: Zingiber24_contig00018358
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00018358
(230 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
ref|XP_004294568.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
gb|EMJ13198.1| hypothetical protein PRUPE_ppa011078mg [Prunus pe... 67 2e-09
emb|CBI30774.3| unnamed protein product [Vitis vinifera] 67 2e-09
gb|EXB58283.1| hypothetical protein L484_015617 [Morus notabilis] 67 2e-09
ref|XP_006467567.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_006377256.1| hypothetical protein POPTR_0011s03060g [Popu... 67 2e-09
ref|XP_002316747.1| predicted protein [Populus trichocarpa] 67 2e-09
ref|XP_006449586.1| hypothetical protein CICLE_v10016169mg [Citr... 65 7e-09
ref|XP_006355563.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_006658667.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_004232997.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
gb|ACU23441.1| unknown [Glycine max] 62 8e-08
gb|ESW19954.1| hypothetical protein PHAVU_006G168700g [Phaseolus... 60 2e-07
gb|EOY27863.1| Pentatricopeptide repeat superfamily protein [The... 60 2e-07
ref|XP_004499754.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
gb|EMS61377.1| hypothetical protein TRIUR3_30925 [Triticum urartu] 58 1e-06
dbj|BAC83317.1| pentatricopeptide (PPR) repeat-containing protei... 58 1e-06
dbj|BAJ85448.1| predicted protein [Hordeum vulgare subsp. vulgar... 58 1e-06
>ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Cucumis sativus]
Length = 270
Score = 69.7 bits (169), Expect = 4e-10
Identities = 28/45 (62%), Positives = 37/45 (82%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 136
D+DTV R+ RAF+ LGQ D R +++KRY C+W+Y+HFKGE VRVR
Sbjct: 217 DEDTVRRVCRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVR 261
>ref|XP_004294568.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 300
Score = 67.4 bits (163), Expect = 2e-09
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRS 139
D+DTV R+ RAF+ GQ DK L+ +RY CKW+Y+HFKGE V+VR+
Sbjct: 244 DEDTVRRVARAFQEFGQEDKSKLVLRRYGCKWKYIHFKGERVKVRT 289
>gb|EMJ13198.1| hypothetical protein PRUPE_ppa011078mg [Prunus persica]
Length = 224
Score = 67.4 bits (163), Expect = 2e-09
Identities = 26/46 (56%), Positives = 38/46 (82%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRS 139
D+DTV R+ RAF+ LGQ + + L+ +RY+CKW+Y+HFKGE V+VR+
Sbjct: 168 DEDTVRRVARAFKELGQEENKTLVLRRYQCKWKYIHFKGERVKVRT 213
>emb|CBI30774.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 67.4 bits (163), Expect = 2e-09
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 136
D+DTV R+ AF+ LGQ DK+ L+ K+Y+CKW+Y+HF GE VRVR
Sbjct: 225 DEDTVRRVACAFQTLGQEDKQKLVLKKYQCKWKYIHFNGERVRVR 269
>gb|EXB58283.1| hypothetical protein L484_015617 [Morus notabilis]
Length = 326
Score = 67.0 bits (162), Expect = 2e-09
Identities = 26/45 (57%), Positives = 37/45 (82%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 136
D+DTV R+ AF+ LGQ +K+ LL ++Y+CKW+Y+HFKGE +RVR
Sbjct: 270 DEDTVRRVAYAFQKLGQEEKKKLLLRKYQCKWKYVHFKGERIRVR 314
>ref|XP_006467567.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Citrus sinensis]
Length = 281
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRSTETYN*GS 163
D+DTV RI AF+ +GQ+DK+ L+ K+Y KW+Y+HFKGE VRVR Y GS
Sbjct: 226 DEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRRDAWYESGS 279
>ref|XP_006377256.1| hypothetical protein POPTR_0011s03060g [Populus trichocarpa]
gi|550327464|gb|ERP55053.1| hypothetical protein
POPTR_0011s03060g [Populus trichocarpa]
Length = 262
Score = 67.0 bits (162), Expect = 2e-09
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 136
D+DTV R+ RAF+ LGQ +KR+L+ +RY CKW+Y+HF GE VRV+
Sbjct: 211 DEDTVWRVARAFKKLGQEEKRELVLERYLCKWKYIHFNGERVRVK 255
>ref|XP_002316747.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 67.0 bits (162), Expect = 2e-09
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 136
D+DTV R+ RAF+ LGQ +KR+L+ +RY CKW+Y+HF GE VRV+
Sbjct: 221 DEDTVWRVARAFKKLGQEEKRELVLERYLCKWKYIHFNGERVRVK 265
>ref|XP_006449586.1| hypothetical protein CICLE_v10016169mg [Citrus clementina]
gi|557552197|gb|ESR62826.1| hypothetical protein
CICLE_v10016169mg [Citrus clementina]
Length = 284
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRSTETYN*GS 163
D+DTV RI AF+ +GQ++K+ L+ K+Y KW+Y+HFKGE VRVR Y GS
Sbjct: 229 DEDTVRRIASAFQRVGQDEKQKLVLKKYLSKWKYIHFKGERVRVRRDAWYESGS 282
>ref|XP_006355563.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X1 [Solanum tuberosum]
gi|565378234|ref|XP_006355564.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X2 [Solanum tuberosum]
gi|565378236|ref|XP_006355565.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X3 [Solanum tuberosum]
Length = 265
Score = 64.7 bits (156), Expect = 1e-08
Identities = 25/45 (55%), Positives = 36/45 (80%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 136
D+DTV R+ RAF++LGQ DK+ L+ K+Y+ +W+Y+HF GE RVR
Sbjct: 217 DEDTVGRVARAFQMLGQEDKQKLVLKKYQSRWKYVHFNGERARVR 261
>ref|XP_006658667.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Oryza brachyantha]
Length = 230
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 136
D+DT RIGRAF LGQ DK L+ K+Y KW+Y+HF GE RVR
Sbjct: 180 DEDTTRRIGRAFAALGQEDKERLVLKKYLKKWKYIHFNGERARVR 224
>ref|XP_004232997.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Solanum lycopersicum]
Length = 265
Score = 62.4 bits (150), Expect = 6e-08
Identities = 24/45 (53%), Positives = 35/45 (77%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 136
D+DTV R+ RAF++LGQ D + L+ K+Y+ +W+Y+HF GE RVR
Sbjct: 217 DEDTVRRVARAFQMLGQEDNQKLVLKKYQSRWKYVHFNGERARVR 261
>ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X1 [Glycine max]
gi|571517206|ref|XP_006597502.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X2 [Glycine max]
Length = 288
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRS 139
D+DTV R+ RAF LG +KR L+ K+Y KW+Y+HF GE VRVR+
Sbjct: 233 DEDTVRRVARAFRELGDEEKRKLVIKQYGLKWKYIHFNGERVRVRT 278
>gb|ACU23441.1| unknown [Glycine max]
Length = 288
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRS 139
D+DTV R+ RAF LG +KR L+ K+Y KW+Y+HF GE VRVR+
Sbjct: 233 DEDTVRRVARAFRELGDEEKRKLVIKQYGLKWKYIHFNGERVRVRT 278
>gb|ESW19954.1| hypothetical protein PHAVU_006G168700g [Phaseolus vulgaris]
Length = 289
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRSTETY 151
D+DTV R+ RAF LG+ +KR L+ +RY KW+Y+HF E VRVR TE Y
Sbjct: 234 DEDTVRRVARAFTELGEEEKRKLVARRYGIKWKYIHFNRERVRVR-TEAY 282
>gb|EOY27863.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 276
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRSTET 148
D++TV ++ RAF+ LGQ DK+ L+ +RY KW+Y+HF GE VRV E+
Sbjct: 225 DENTVRKVARAFQKLGQEDKQKLVLRRYLSKWKYIHFNGERVRVTRYES 273
>ref|XP_004499754.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X5 [Cicer arietinum]
Length = 287
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 136
D+DTV ++ AF LGQ +KR + KRY KW+Y+HF GE VRVR
Sbjct: 236 DEDTVRKVTNAFRKLGQEEKRKSVIKRYGLKWKYIHFNGERVRVR 280
>gb|EMS61377.1| hypothetical protein TRIUR3_30925 [Triticum urartu]
Length = 300
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 136
D+DT RIGRAF GQ DK+ + ++Y KW+Y+HF GE VRVR
Sbjct: 250 DEDTTRRIGRAFATSGQEDKQKPVLEKYLKKWKYIHFNGERVRVR 294
>dbj|BAC83317.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|125600619|gb|EAZ40195.1| hypothetical protein
OsJ_24640 [Oryza sativa Japonica Group]
Length = 253
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 136
D+DT RIGRAF LGQ DK ++ ++Y K++Y+HF GE VRVR
Sbjct: 203 DEDTTRRIGRAFVTLGQEDKEKIVLEKYLKKYKYMHFNGERVRVR 247
>dbj|BAJ85448.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511571|dbj|BAJ91930.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326517433|dbj|BAK00083.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531618|dbj|BAJ97813.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 251
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +2
Query: 2 DDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 136
D+DT RIGRAF GQ DK+ + ++Y KW+Y+HF GE VRVR
Sbjct: 201 DEDTTRRIGRAFATSGQEDKQKPVLEKYLKKWKYIHFNGERVRVR 245