BLASTX nr result
ID: Zingiber24_contig00018311
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00018311
(368 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT08736.1| high mobility group I/Y-2 [Hyacinthus orientalis] 84 1e-14
ref|NP_001063124.1| Os09g0402100 [Oryza sativa Japonica Group] g... 70 2e-10
ref|XP_004973484.1| PREDICTED: HMG-Y-related protein A-like [Set... 69 8e-10
ref|YP_007363168.1| transcriptional regulator CarD [Myxococcus s... 64 2e-08
gb|EXB90895.1| HMG-Y-related protein A [Morus notabilis] 63 4e-08
gb|AFW62239.1| hypothetical protein ZEAMMB73_329593 [Zea mays] 63 5e-08
ref|NP_001144569.1| uncharacterized protein LOC100277576 [Zea ma... 63 5e-08
gb|EOY01045.1| HMG-Y-related protein B [Theobroma cacao] 61 2e-07
ref|YP_005372064.1| transcriptional regulator CarD [Corallococcu... 61 2e-07
gb|EMJ23090.1| hypothetical protein PRUPE_ppa018145mg [Prunus pe... 60 2e-07
ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|2... 60 2e-07
ref|NP_001105938.1| HMGI/Y protein [Zea mays] gi|11544762|emb|CA... 60 4e-07
ref|XP_006469214.1| PREDICTED: HMG-Y-related protein A-like [Cit... 59 5e-07
ref|XP_006448210.1| hypothetical protein CICLE_v10016374mg [Citr... 59 5e-07
ref|NP_001105009.1| high mobility group I/Y-2 [Zea mays] gi|9837... 59 5e-07
ref|XP_006291855.1| hypothetical protein CARUB_v10018031mg [Caps... 59 9e-07
ref|YP_633761.1| transcriptional regulator CarD [Myxococcus xant... 59 9e-07
ref|NP_001061850.2| Os08g0428800 [Oryza sativa Japonica Group] g... 59 9e-07
ref|XP_002445522.1| hypothetical protein SORBIDRAFT_07g020920 [S... 57 2e-06
ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vi... 57 2e-06
>gb|AAT08736.1| high mobility group I/Y-2 [Hyacinthus orientalis]
Length = 180
Score = 84.3 bits (207), Expect = 1e-14
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAEKAAG 201
PPKPK +L G+ PSPRPRGRPPK KDPL AVAKAA+G PR RGRPPK + G
Sbjct: 85 PPKPKTPLLAGSVSPSPRPRGRPPKPKDPLAAAVAKAASGMPRQRGRPPKKARVGG 140
>ref|NP_001063124.1| Os09g0402100 [Oryza sativa Japonica Group] gi|453692|gb|AAA33914.1|
AT hook 1 from AA 98-106, AT hook 2 from AA 129-137, AT
hook 3 from AA 154-162, AT hook 4 from AA 192-200 [Oryza
sativa Indica Group] gi|51091572|dbj|BAD36308.1| DNA
binding protein PF1 [Oryza sativa Japonica Group]
gi|113631357|dbj|BAF25038.1| Os09g0402100 [Oryza sativa
Japonica Group] gi|215687164|dbj|BAG90934.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 213
Score = 70.5 bits (171), Expect = 2e-10
Identities = 38/69 (55%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Frame = -1
Query: 368 PPKPKPDVLTGAELP----------SPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPK 219
PPKPK D A P SPRPRGRPPK KDPL AVAKA +G PR+RGRPPK
Sbjct: 104 PPKPK-DAAAAAAAPAPAPAAPAASSPRPRGRPPKPKDPLAEAVAKATSGMPRARGRPPK 162
Query: 218 AEKAAGSTP 192
K P
Sbjct: 163 KAKVEQEDP 171
>ref|XP_004973484.1| PREDICTED: HMG-Y-related protein A-like [Setaria italica]
Length = 196
Score = 68.6 bits (166), Expect = 8e-10
Identities = 36/63 (57%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAEK---AAGS 198
PP P TG SPRPRGRPPK KDPL+ AVA+A AG P++RGRPPK K A +
Sbjct: 102 PPPPPKAPSTG----SPRPRGRPPKPKDPLDAAVAQATAGMPKARGRPPKKAKIDATAAA 157
Query: 197 TPS 189
PS
Sbjct: 158 APS 160
>ref|YP_007363168.1| transcriptional regulator CarD [Myxococcus stipitatus DSM 14675]
gi|505164636|ref|WP_015351738.1| transcriptional
regulator CarD [Myxococcus stipitatus]
gi|441490789|gb|AGC47484.1| transcriptional regulator
CarD [Myxococcus stipitatus DSM 14675]
Length = 322
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/57 (61%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = -1
Query: 368 PPKPKPDVLT-GAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAEKAAG 201
PPKPKP+ GAE P+P+ RGRPPKAK P E A A+ AA P+ RGRPPKA+ A G
Sbjct: 266 PPKPKPEAPPPGAEAPAPKKRGRPPKAKPP-EVAGAEPAA--PKKRGRPPKAKPAEG 319
>gb|EXB90895.1| HMG-Y-related protein A [Morus notabilis]
Length = 184
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVA-KAAAGFPRSRGRPPKAEKAAGSTP 192
PPKPK + TG+ + SPRPRGRPPK +DP + K + G R RGRPPK K A S
Sbjct: 99 PPKPKAPLPTGSAVASPRPRGRPPKPRDPFSPPPSQKKSPGSGRPRGRPPKKAKTAPSAA 158
Query: 191 S 189
S
Sbjct: 159 S 159
>gb|AFW62239.1| hypothetical protein ZEAMMB73_329593 [Zea mays]
Length = 183
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAEKAAG 201
PPK + D PS R RGRPPK KDPL+ AV +A AG PR+RGRPPK K G
Sbjct: 94 PPKAR-DPGAPVSPPSGRGRGRPPKPKDPLDAAVKQATAGMPRARGRPPKKAKTEG 148
>ref|NP_001144569.1| uncharacterized protein LOC100277576 [Zea mays]
gi|195643916|gb|ACG41426.1| hypothetical protein [Zea
mays]
Length = 183
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAEKAAG 201
PPK + D PS R RGRPPK KDPL+ AV +A AG PR+RGRPPK K G
Sbjct: 94 PPKAR-DPGAPVSPPSGRGRGRPPKPKDPLDAAVKQATAGMPRARGRPPKKAKTEG 148
>gb|EOY01045.1| HMG-Y-related protein B [Theobroma cacao]
Length = 190
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/57 (50%), Positives = 33/57 (57%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAEKAAGS 198
PPKPK + G + PRPRGRPPK KDP + K + G R RGRPPK K S
Sbjct: 101 PPKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPSKPKTSGGTGRPRGRPPKKAKTGVS 157
>ref|YP_005372064.1| transcriptional regulator CarD [Corallococcus coralloides DSM 2259]
gi|504211797|ref|WP_014398899.1| transcriptional
regulator [Corallococcus coralloides]
gi|380732260|gb|AFE08262.1| transcriptional regulator
CarD [Corallococcus coralloides DSM 2259]
Length = 319
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAE 213
PPK KP+V GAE +P+ RGRPPKA+ P A A+ AA P+ RGRPPKA+
Sbjct: 265 PPKAKPEVAEGAEPAAPKKRGRPPKARPPEGAAPAEPAA--PKKRGRPPKAK 314
>gb|EMJ23090.1| hypothetical protein PRUPE_ppa018145mg [Prunus persica]
Length = 188
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/60 (50%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLE-TAVAKAAAGFPRSRGRPPKAEKAAGSTP 192
PPKPK + G + PRPRGRPPK +DP A K+ +G R RGRPPK K A + P
Sbjct: 99 PPKPKVPLPPGTVVSPPRPRGRPPKPRDPFSPQAEPKSPSGTGRPRGRPPKKAKTASAPP 158
>ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|223532819|gb|EEF34594.1|
Histone H1, putative [Ricinus communis]
Length = 199
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/64 (50%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVAK----AAAGFPRSRGRPPKAEKAAG 201
PPKPK + GA + PRPRGRPPK +DP + A A R RGRPPK AA
Sbjct: 108 PPKPKAPLPPGAVIAPPRPRGRPPKPRDPFAPVASPKKKIATAPTGRPRGRPPKLPSAAP 167
Query: 200 STPS 189
TPS
Sbjct: 168 PTPS 171
>ref|NP_001105938.1| HMGI/Y protein [Zea mays] gi|11544762|emb|CAB40848.2| HMGI/Y
protein [Zea mays]
Length = 191
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/56 (55%), Positives = 34/56 (60%)
Frame = -1
Query: 365 PKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAEKAAGS 198
P PK TG R RGRPPKAK PLE AV +A AG P+ RGRPPK K G+
Sbjct: 104 PAPKSPSSTG------RGRGRPPKAKSPLEAAVKQATAGMPKPRGRPPKKAKTEGA 153
>ref|XP_006469214.1| PREDICTED: HMG-Y-related protein A-like [Citrus sinensis]
Length = 210
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/58 (51%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVA---KAAAGFPRSRGRPPKAEKAA 204
PPKPK + G L PRPRGRPPK +DP A K++ G R RGRPPK K A
Sbjct: 112 PPKPKDPLPPGTVLSPPRPRGRPPKPRDPFAPPAASKKKSSGGSGRPRGRPPKKAKTA 169
>ref|XP_006448210.1| hypothetical protein CICLE_v10016374mg [Citrus clementina]
gi|557550821|gb|ESR61450.1| hypothetical protein
CICLE_v10016374mg [Citrus clementina]
Length = 251
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/58 (51%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVA---KAAAGFPRSRGRPPKAEKAA 204
PPKPK + G L PRPRGRPPK +DP A K++ G R RGRPPK K A
Sbjct: 153 PPKPKDPLPPGTVLSPPRPRGRPPKPRDPFAPPAASKKKSSGGSGRPRGRPPKKAKTA 210
>ref|NP_001105009.1| high mobility group I/Y-2 [Zea mays]
gi|9837562|gb|AAG00601.1|AF291748_1 high mobility group
I/Y-2 [Zea mays] gi|195605198|gb|ACG24429.1|
hypothetical protein [Zea mays]
gi|414870485|tpg|DAA49042.1| TPA: high mobility group
I/Y-2 [Zea mays]
Length = 193
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/56 (55%), Positives = 34/56 (60%)
Frame = -1
Query: 365 PKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAEKAAGS 198
P PK TG R RGRPPKAK PLE AV +A AG P+ RGRPPK K G+
Sbjct: 104 PAPKSPSSTG------RGRGRPPKAKSPLEAAVKQATAGMPKPRGRPPKKAKTDGA 153
>ref|XP_006291855.1| hypothetical protein CARUB_v10018031mg [Capsella rubella]
gi|482560562|gb|EOA24753.1| hypothetical protein
CARUB_v10018031mg [Capsella rubella]
Length = 207
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/65 (46%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Frame = -1
Query: 368 PPKPKPDV-------LTGAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAEK 210
PPKPKPDV ++ PRPRGRPPK+KD KA + R RGRPPK +K
Sbjct: 111 PPKPKPDVDPSNAAAVSAPSASPPRPRGRPPKSKDSQSEPKPKAPSSSGRPRGRPPKKQK 170
Query: 209 AAGST 195
T
Sbjct: 171 TESET 175
>ref|YP_633761.1| transcriptional regulator CarD [Myxococcus xanthus DK 1622]
gi|499874842|ref|WP_011555576.1| transcriptional
regulator [Myxococcus xanthus]
gi|1022328|emb|CAA91224.1| carD [Myxococcus xanthus]
gi|108464472|gb|ABF89657.1| transcriptional regulator
CarD [Myxococcus xanthus DK 1622]
Length = 316
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = -1
Query: 368 PPKPKPDVLT-GAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAEKAAGST 195
PPKPKP+ GAE P+P+ RGRPPK K P V AA P+ RGRPPK + G +
Sbjct: 261 PPKPKPEATAEGAEPPAPKKRGRPPKPKPP---EVEGAAPAAPKKRGRPPKVKPPEGES 316
>ref|NP_001061850.2| Os08g0428800 [Oryza sativa Japonica Group]
gi|25553691|dbj|BAC24935.1| putative high mobility group
I/Y (HMGI/Y protein) [Oryza sativa Japonica Group]
gi|38175502|dbj|BAD01198.1| putative high mobility group
I/Y (HMGI/Y protein) [Oryza sativa Japonica Group]
gi|255678466|dbj|BAF23764.2| Os08g0428800 [Oryza sativa
Japonica Group]
Length = 178
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAEKAAGSTP 192
PP PKP SPRPRGRPPK+KDP+ A+ P+SRGRPPK K A + P
Sbjct: 104 PPPPKPS--------SPRPRGRPPKSKDPISDAI-------PKSRGRPPKKAKTAPAPP 147
>ref|XP_002445522.1| hypothetical protein SORBIDRAFT_07g020920 [Sorghum bicolor]
gi|241941872|gb|EES15017.1| hypothetical protein
SORBIDRAFT_07g020920 [Sorghum bicolor]
Length = 198
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLETAVAKAAAGFPRSRGRPPKAEKAA--GST 195
PP PK G + R RGRPPKAK L+ AV +A AG P++RGRPPK K + G++
Sbjct: 103 PPPPKSPASAG----TGRGRGRPPKAKSALDAAVKQATAGMPKARGRPPKKAKTSEDGAS 158
Query: 194 PS 189
P+
Sbjct: 159 PA 160
>ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vinifera]
gi|297737664|emb|CBI26865.3| unnamed protein product
[Vitis vinifera]
Length = 182
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = -1
Query: 368 PPKPKPDVLTGAELPSPRPRGRPPKAKDPLE--TAVAKAAAGFPRSRGRPPKAEKAAGST 195
PPKPK + G L PRPRGRPPK +DP + KA++G + RGRPPK K S+
Sbjct: 96 PPKPKVPLPPGTVLAPPRPRGRPPKPRDPFAPVSPPKKASSGSGKPRGRPPKKPKVGTSS 155