BLASTX nr result

ID: Zingiber24_contig00018257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00018257
         (577 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF69983.1| zinc finger (C3HC4 type RING finger) family prote...    60   4e-07

>gb|ABF69983.1| zinc finger (C3HC4 type RING finger) family protein [Musa
           acuminata]
          Length = 297

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = -3

Query: 575 FTGFGISISMNSLLIEYLRWRA-XXXXXXXXXXXXXXXSEARNLARVEDGDDTRQQDLEN 399
           FTGFGI+IS N+ L+EYLRWRA                 E+RNL  VE+G + RQ + EN
Sbjct: 227 FTGFGIAISTNASLVEYLRWRARRNLRLAQQQSDNRQQQESRNLPDVENGGNVRQHESEN 286

Query: 398 QIQDLNPLQ 372
           QIQ+ +P Q
Sbjct: 287 QIQNPDPSQ 295


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