BLASTX nr result
ID: Zingiber24_contig00018082
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00018082
(548 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indi... 110 2e-22
ref|XP_006654624.1| PREDICTED: single-stranded DNA-binding prote... 110 3e-22
ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group] g... 110 3e-22
ref|XP_006654625.1| PREDICTED: single-stranded DNA-binding prote... 109 4e-22
ref|XP_006858687.1| hypothetical protein AMTR_s00066p00089800 [A... 108 8e-22
ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding prote... 107 2e-21
ref|XP_006288685.1| hypothetical protein CARUB_v10001995mg [Caps... 105 7e-21
ref|NP_192844.2| mitochondrially targeted single-stranded DNA bi... 104 1e-20
dbj|BAK06246.1| predicted protein [Hordeum vulgare subsp. vulgare] 104 1e-20
ref|XP_002874672.1| mitochondrially targeted single-stranded DNA... 104 1e-20
emb|CAB43041.1| putative protein [Arabidopsis thaliana] gi|72678... 104 1e-20
gb|EMT18609.1| Single-stranded DNA-binding protein, mitochondria... 104 2e-20
ref|XP_004157233.1| PREDICTED: single-stranded DNA-binding prote... 103 2e-20
ref|XP_004135584.1| PREDICTED: single-stranded DNA-binding prote... 103 2e-20
ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho... 103 3e-20
ref|XP_006396965.1| hypothetical protein EUTSA_v10028973mg [Eutr... 103 4e-20
ref|XP_002319495.2| single-strand-binding family protein [Populu... 102 5e-20
gb|AFW78633.1| hypothetical protein ZEAMMB73_663564 [Zea mays] 102 6e-20
ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding prote... 102 6e-20
gb|ACR34446.1| unknown [Zea mays] gi|413945979|gb|AFW78628.1| hy... 102 6e-20
>gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indica Group]
gi|222632182|gb|EEE64314.1| hypothetical protein
OsJ_19151 [Oryza sativa Japonica Group]
Length = 245
Score = 110 bits (275), Expect = 2e-22
Identities = 63/127 (49%), Positives = 77/127 (60%), Gaps = 2/127 (1%)
Frame = -1
Query: 386 ARFYFSSSMKLRLLRGRVLEHLKGSFAQPRFPLGHWRGSQACFSTISLXXXXXXXXXXXX 207
ARF +S L +L+ L+ Q R P+ +R SQA ST+S
Sbjct: 36 ARFTMNS------LSNGLLKGLRRVLEQQRKPIDFYRKSQAWSSTVSFSDIDEKSEMGGD 89
Query: 206 XXXEG--KILEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGM 33
+ LEPQ VDP KG FRGVH+AI+CGKVGQ P+QKILRNGRTVT+FTVGTGGM
Sbjct: 90 DDYTDSRRELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTVGTGGM 149
Query: 32 YDQRISG 12
+DQR+ G
Sbjct: 150 FDQRVVG 156
>ref|XP_006654624.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform X1 [Oryza brachyantha]
Length = 212
Score = 110 bits (274), Expect = 3e-22
Identities = 66/131 (50%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Frame = -1
Query: 386 ARFYFSSSMKLRLLRG--RVLEHLKGSFAQPRFPLGHWRGSQACFSTISLXXXXXXXXXX 213
ARF S+ + LL+G RVLE Q R P+ R SQA ST+S
Sbjct: 3 ARFTMSA-LNTGLLKGLRRVLE-------QQRKPIDFCRKSQAWSSTVSFSDLDEKNDIG 54
Query: 212 XXXXXEG--KILEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTG 39
+ LEPQ VDP KG FRGVH+AI+CGKVGQ P+QKILRNGRTVT+FT+GTG
Sbjct: 55 DDGDYTDSRRELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTIGTG 114
Query: 38 GMYDQRISGKE 6
GM+DQR++G +
Sbjct: 115 GMFDQRLAGDD 125
>ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group]
gi|48475206|gb|AAT44275.1| putative single-strand DNA
binding protein [Oryza sativa Japonica Group]
gi|113579555|dbj|BAF17918.1| Os05g0509700 [Oryza sativa
Japonica Group] gi|215706976|dbj|BAG93436.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 206
Score = 110 bits (274), Expect = 3e-22
Identities = 59/114 (51%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Frame = -1
Query: 347 LRGRVLEHLKGSFAQPRFPLGHWRGSQACFSTISLXXXXXXXXXXXXXXXEG--KILEPQ 174
L +L+ L+ Q R P+ +R SQA ST+S + LEPQ
Sbjct: 4 LSNGLLKGLRRVLEQQRKPIDFYRKSQAWSSTVSFSDIDEKSEMGGDDDYTDSRRELEPQ 63
Query: 173 GVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISG 12
VDP KG FRGVH+AI+CGKVGQ P+QKILRNGRTVT+FTVGTGGM+DQR+ G
Sbjct: 64 SVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTVGTGGMFDQRVVG 117
>ref|XP_006654625.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform X2 [Oryza brachyantha]
Length = 206
Score = 109 bits (273), Expect = 4e-22
Identities = 63/125 (50%), Positives = 78/125 (62%), Gaps = 4/125 (3%)
Frame = -1
Query: 368 SSMKLRLLRG--RVLEHLKGSFAQPRFPLGHWRGSQACFSTISLXXXXXXXXXXXXXXXE 195
S++ LL+G RVLE Q R P+ R SQA ST+S
Sbjct: 2 SALNTGLLKGLRRVLE-------QQRKPIDFCRKSQAWSSTVSFSDLDEKNDIGDDGDYT 54
Query: 194 G--KILEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQR 21
+ LEPQ VDP KG FRGVH+AI+CGKVGQ P+QKILRNGRTVT+FT+GTGGM+DQR
Sbjct: 55 DSRRELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTIGTGGMFDQR 114
Query: 20 ISGKE 6
++G +
Sbjct: 115 LAGDD 119
>ref|XP_006858687.1| hypothetical protein AMTR_s00066p00089800 [Amborella trichopoda]
gi|548862798|gb|ERN20154.1| hypothetical protein
AMTR_s00066p00089800 [Amborella trichopoda]
Length = 255
Score = 108 bits (270), Expect = 8e-22
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISGKE 6
L+PQGVDP +G FRGVHKAI+CGK+GQ P+QKILRNGRTVTIFTVGTGGM+DQRI G E
Sbjct: 25 LQPQGVDPKRGWAFRGVHKAIICGKIGQPPVQKILRNGRTVTIFTVGTGGMFDQRILGSE 84
Query: 5 H 3
H
Sbjct: 85 H 85
>ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Vitis vinifera] gi|296089740|emb|CBI39559.3| unnamed
protein product [Vitis vinifera]
Length = 208
Score = 107 bits (266), Expect = 2e-21
Identities = 50/60 (83%), Positives = 55/60 (91%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISGKE 6
L+ QGVDP KG FRGVHKAI+CGKVGQAP+QKILRNGRTVTIFTVGTGGM+DQRI GK+
Sbjct: 62 LQLQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQRIGGKD 121
>ref|XP_006288685.1| hypothetical protein CARUB_v10001995mg [Capsella rubella]
gi|482557391|gb|EOA21583.1| hypothetical protein
CARUB_v10001995mg [Capsella rubella]
Length = 202
Score = 105 bits (262), Expect = 7e-21
Identities = 48/58 (82%), Positives = 54/58 (93%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISG 12
L+PQGVDP KG FRGVH+AI+CGKVGQ+PLQKILRNGRTVTIFTVGTGGM+DQR+ G
Sbjct: 56 LQPQGVDPRKGWGFRGVHRAIICGKVGQSPLQKILRNGRTVTIFTVGTGGMFDQRLVG 113
>ref|NP_192844.2| mitochondrially targeted single-stranded DNA binding protein
[Arabidopsis thaliana] gi|38258307|sp|Q84J78.1|SSB_ARATH
RecName: Full=Single-stranded DNA-binding protein,
mitochondrial; Flags: Precursor
gi|28393531|gb|AAO42186.1| unknown protein [Arabidopsis
thaliana] gi|28827408|gb|AAO50548.1| unknown protein
[Arabidopsis thaliana] gi|34556071|emb|CAE46651.1|
single-stranded DNA binding protein [Arabidopsis
thaliana] gi|332657567|gb|AEE82967.1| mitochondrially
targeted single-stranded DNA binding protein
[Arabidopsis thaliana]
Length = 201
Score = 104 bits (260), Expect = 1e-20
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISG 12
L+P GVDP KG FRGVH+AI+CGKVGQAPLQKILRNGRTVTIFTVGTGGM+DQR+ G
Sbjct: 55 LQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVG 112
>dbj|BAK06246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 104 bits (260), Expect = 1e-20
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISG 12
LEPQ VDP KG FRGVH+AI+CGKVGQAP+QKILRNGRTVTIFT+GTGGM+DQR+ G
Sbjct: 60 LEPQSVDPKKGWGFRGVHRAIICGKVGQAPVQKILRNGRTVTIFTIGTGGMFDQRVIG 117
>ref|XP_002874672.1| mitochondrially targeted single-stranded DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
gi|297320509|gb|EFH50931.1| mitochondrially targeted
single-stranded DNA binding protein [Arabidopsis lyrata
subsp. lyrata]
Length = 201
Score = 104 bits (260), Expect = 1e-20
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISG 12
L+P GVDP KG FRGVH+AI+CGKVGQAPLQKILRNGRTVTIFTVGTGGM+DQR+ G
Sbjct: 55 LQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVG 112
>emb|CAB43041.1| putative protein [Arabidopsis thaliana] gi|7267804|emb|CAB81207.1|
putative protein [Arabidopsis thaliana]
Length = 254
Score = 104 bits (260), Expect = 1e-20
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISG 12
L+P GVDP KG FRGVH+AI+CGKVGQAPLQKILRNGRTVTIFTVGTGGM+DQR+ G
Sbjct: 55 LQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVG 112
>gb|EMT18609.1| Single-stranded DNA-binding protein, mitochondrial [Aegilops
tauschii]
Length = 254
Score = 104 bits (259), Expect = 2e-20
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISG 12
LEPQ VDP KG FRGVH+AI+CGKVGQAP+QKILRNGRT+TIFT+GTGGM+DQR+ G
Sbjct: 77 LEPQSVDPKKGWGFRGVHRAIICGKVGQAPVQKILRNGRTITIFTIGTGGMFDQRVIG 134
>ref|XP_004157233.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 214
Score = 103 bits (258), Expect = 2e-20
Identities = 46/56 (82%), Positives = 53/56 (94%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRI 18
L+PQGVDP +G +RGVHKAI+CG+VGQAP+QKILRNGRT+TIFTVGTGGMYDQRI
Sbjct: 64 LQPQGVDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRI 119
>ref|XP_004135584.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 214
Score = 103 bits (258), Expect = 2e-20
Identities = 46/56 (82%), Positives = 53/56 (94%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRI 18
L+PQGVDP +G +RGVHKAI+CG+VGQAP+QKILRNGRT+TIFTVGTGGMYDQRI
Sbjct: 64 LQPQGVDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRI 119
>ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis] gi|223531260|gb|EEF33103.1|
Single-stranded DNA-binding protein, mitochondrial
precursor, putative [Ricinus communis]
Length = 213
Score = 103 bits (257), Expect = 3e-20
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISG 12
L+ QGVDP KG FRGVHKAI+CGKVGQAP+QKILRNGRTVTIFTVGTGGM+DQRI G
Sbjct: 67 LQIQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQRIVG 124
>ref|XP_006396965.1| hypothetical protein EUTSA_v10028973mg [Eutrema salsugineum]
gi|567163147|ref|XP_006396966.1| hypothetical protein
EUTSA_v10028973mg [Eutrema salsugineum]
gi|567163150|ref|XP_006396967.1| hypothetical protein
EUTSA_v10028973mg [Eutrema salsugineum]
gi|557097982|gb|ESQ38418.1| hypothetical protein
EUTSA_v10028973mg [Eutrema salsugineum]
gi|557097983|gb|ESQ38419.1| hypothetical protein
EUTSA_v10028973mg [Eutrema salsugineum]
gi|557097984|gb|ESQ38420.1| hypothetical protein
EUTSA_v10028973mg [Eutrema salsugineum]
Length = 201
Score = 103 bits (256), Expect = 4e-20
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISG 12
L+P GVDP KG FRGVH+AI+CGKVGQAPLQKILR+GRTVTIFTVGTGGM+DQR+ G
Sbjct: 55 LQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRSGRTVTIFTVGTGGMFDQRLMG 112
>ref|XP_002319495.2| single-strand-binding family protein [Populus trichocarpa]
gi|550324675|gb|EEE95418.2| single-strand-binding family
protein [Populus trichocarpa]
Length = 215
Score = 102 bits (255), Expect = 5e-20
Identities = 54/101 (53%), Positives = 65/101 (64%), Gaps = 6/101 (5%)
Frame = -1
Query: 290 LGHWRGSQACFSTISLXXXXXXXXXXXXXXXEGKILEP------QGVDPDKGGNFRGVHK 129
+G R ++C+ST+S +L QGVDP KG FRGVH+
Sbjct: 27 VGLQRSLRSCYSTVSFNSDNEEGKNDKVEEEFDDLLGDRRESRFQGVDPRKGWEFRGVHR 86
Query: 128 AILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISGKE 6
AI+CGKVGQAP+QKILRNGRTVTIFTVGTGGM+DQRI G +
Sbjct: 87 AIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQRIIGSK 127
>gb|AFW78633.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 223
Score = 102 bits (254), Expect = 6e-20
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISG 12
L PQGVDP+KG FRGVH+AI+CGKVGQ P+QKILRNG TVT+FTVGTGGM+DQR+ G
Sbjct: 60 LRPQGVDPNKGWEFRGVHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIG 117
>ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Glycine max]
Length = 217
Score = 102 bits (254), Expect = 6e-20
Identities = 47/58 (81%), Positives = 52/58 (89%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISG 12
L+ QGVDP KG FRGVHKAI+CGKVGQAP+QKILRNGR +TIFTVGTGGM+DQRI G
Sbjct: 71 LQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNITIFTVGTGGMFDQRIQG 128
>gb|ACR34446.1| unknown [Zea mays] gi|413945979|gb|AFW78628.1| hypothetical protein
ZEAMMB73_663564 [Zea mays]
Length = 151
Score = 102 bits (254), Expect = 6e-20
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = -1
Query: 185 LEPQGVDPDKGGNFRGVHKAILCGKVGQAPLQKILRNGRTVTIFTVGTGGMYDQRISG 12
L PQGVDP+KG FRGVH+AI+CGKVGQ P+QKILRNG TVT+FTVGTGGM+DQR+ G
Sbjct: 60 LRPQGVDPNKGWEFRGVHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIG 117