BLASTX nr result

ID: Zingiber24_contig00018053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00018053
         (207 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGB51444.1| casein kinase beta chain [Cocos nucifera]               58   1e-06
ref|XP_004138933.1| PREDICTED: putative casein kinase II subunit...    55   7e-06

>gb|AGB51444.1| casein kinase beta chain [Cocos nucifera]
          Length = 200

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/50 (60%), Positives = 39/50 (78%), Gaps = 6/50 (12%)
 Frame = +2

Query: 2   LDKHLEKASPSTSRGLIGKDKDRLTVPPSASMKQPEHR------SLSKNK 133
           LDKHLEK+SPSTSRGL G++K+RL+V  +++ KQP+H       SLSKNK
Sbjct: 26  LDKHLEKSSPSTSRGLNGREKERLSVLSTSAGKQPDHHRDQRSASLSKNK 75


>ref|XP_004138933.1| PREDICTED: putative casein kinase II subunit beta-4-like [Cucumis
           sativus] gi|449505605|ref|XP_004162519.1| PREDICTED:
           putative casein kinase II subunit beta-4-like [Cucumis
           sativus]
          Length = 295

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 3/47 (6%)
 Frame = +2

Query: 2   LDKHLEKASPSTSRGLIGKDKDRLTVPPSASMK-QPEHR--SLSKNK 133
           LDKHLEK SPSTSRGL  K+K+RL+VP +++ K Q +HR  SLSKNK
Sbjct: 36  LDKHLEKTSPSTSRGLHSKEKERLSVPSTSTGKPQLDHRSASLSKNK 82


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