BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00018043
         (888 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK07145.1| predicted protein [Hordeum vulgare subsp. vulgare]    148   3e-33
dbj|BAJ84943.1| predicted protein [Hordeum vulgare subsp. vulgare]    148   3e-33
gb|ADQ38902.1| bHLH transcription factor [Musa acuminata AAA Group]   147   5e-33
gb|ACN34591.1| unknown [Zea mays] gi|414885909|tpg|DAA61923.1| T...   145   2e-32
ref|XP_004957106.1| PREDICTED: transcription factor BIM2-like is...   143   7e-32
ref|XP_004957105.1| PREDICTED: transcription factor BIM2-like is...   143   7e-32
ref|XP_004957107.1| PREDICTED: transcription factor BIM2-like is...   143   1e-31
ref|XP_004973763.1| PREDICTED: transcription factor BIM1-like [S...   142   2e-31
gb|EOY22175.1| Transcription factor BIM1, putative isoform 3 [Th...   142   2e-31
gb|EOY22174.1| Transcription factor BIM1, putative isoform 2 [Th...   142   2e-31
gb|EOY22173.1| Transcription factor BIM1, putative isoform 1 [Th...   142   2e-31
tpg|DAA61920.1| TPA: putative HLH DNA-binding domain superfamily...   141   3e-31
gb|ACN36276.1| unknown [Zea mays] gi|414885908|tpg|DAA61922.1| T...   141   3e-31
gb|ACL52596.1| unknown [Zea mays] gi|414885905|tpg|DAA61919.1| T...   141   3e-31
ref|NP_001130805.1| putative HLH DNA-binding domain superfamily ...   141   3e-31
ref|XP_003578285.1| PREDICTED: transcription factor BIM1-like [B...   140   6e-31
ref|XP_006661342.1| PREDICTED: transcription factor BIM1-like [O...   140   8e-31
gb|ACG28929.1| transcription factor BIM2 [Zea mays]                   138   2e-30
ref|NP_001062109.1| Os08g0490000 [Oryza sativa Japonica Group] g...   137   5e-30
gb|EEE68905.1| hypothetical protein OsJ_27750 [Oryza sativa Japo...   137   5e-30

>dbj|BAK07145.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 378

 Score =  148 bits (373), Expect = 3e-33
 Identities = 114/290 (39%), Positives = 156/290 (53%), Gaps = 11/290 (3%)
 Frame = -3

Query: 886 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-------GKLSLQQNSNQAPA 728
           DKA+FLLEVIEYIRFLQEK QKYE S+PE +Q++ KL+P             Q+  Q P 
Sbjct: 125 DKATFLLEVIEYIRFLQEKAQKYEASFPEWNQENAKLLPWSNMYFRSSWKNAQSKGQIPE 184

Query: 727 NVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQT 548
           +          + A+P   ++ K ++   A A    IS   +  +T  ++  +S ++  T
Sbjct: 185 DASPDPSQFIRNGASPGFNITGKLDDNHTAVASAA-ISGAQDQAETDHMAS-VSCRSADT 242

Query: 547 TTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLADGAV 368
            TN +NN++                      QSQP             W++   + D AV
Sbjct: 243 PTNILNNVS---------------------PQSQP------------QWADPSGVDDCAV 269

Query: 367 INQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVE 188
            +  LN  ++L+IDEGTI+VS+ YS ELLNTLT AL+SSGIDLSQANI+VQINLGKRAV+
Sbjct: 270 NSDVLNN-QQLMIDEGTISVSSQYSQELLNTLTHALQSSGIDLSQANISVQINLGKRAVK 328

Query: 187 RRSGAASTSCTTNKDMEDLVSGKQAKGYNRARLMA----ELPSEASKRQK 50
           R +   S+S    K+  DL       G+ +A L A    ELP  A+KR K
Sbjct: 329 RPTAGQSSSF---KEHTDLGPTNDMMGHQQAMLGAAAAEELP-HATKRYK 374


>dbj|BAJ84943.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 605

 Score =  148 bits (373), Expect = 3e-33
 Identities = 114/290 (39%), Positives = 156/290 (53%), Gaps = 11/290 (3%)
 Frame = -3

Query: 886  DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-------GKLSLQQNSNQAPA 728
            DKA+FLLEVIEYIRFLQEK QKYE S+PE +Q++ KL+P             Q+  Q P 
Sbjct: 352  DKATFLLEVIEYIRFLQEKAQKYEASFPEWNQENAKLLPWSNMYFRSSWKNAQSKGQIPE 411

Query: 727  NVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQT 548
            +          + A+P   ++ K ++   A A    IS   +  +T  ++  +S ++  T
Sbjct: 412  DASPDPSQFIRNGASPGFNITGKLDDNHTAVASAA-ISGAQDQAETDHMAS-VSCRSADT 469

Query: 547  TTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLADGAV 368
             TN +NN++                      QSQP             W++   + D AV
Sbjct: 470  PTNILNNVS---------------------PQSQP------------QWADPSGVDDCAV 496

Query: 367  INQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVE 188
             +  LN  ++L+IDEGTI+VS+ YS ELLNTLT AL+SSGIDLSQANI+VQINLGKRAV+
Sbjct: 497  NSDVLNN-QQLMIDEGTISVSSQYSQELLNTLTHALQSSGIDLSQANISVQINLGKRAVK 555

Query: 187  RRSGAASTSCTTNKDMEDLVSGKQAKGYNRARLMA----ELPSEASKRQK 50
            R +   S+S    K+  DL       G+ +A L A    ELP  A+KR K
Sbjct: 556  RPTAGQSSSF---KEHTDLGPTNDMMGHQQAMLGAAAAEELP-HATKRYK 601


>gb|ADQ38902.1| bHLH transcription factor [Musa acuminata AAA Group]
          Length = 331

 Score =  147 bits (371), Expect = 5e-33
 Identities = 105/281 (37%), Positives = 152/281 (54%), Gaps = 2/281 (0%)
 Frame = -3

Query: 886 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLLVSH 707
           DKASFLLEVIEYI+FLQEKVQKYE S+P  +Q++ KLMP       +SNQ P + ++   
Sbjct: 79  DKASFLLEVIEYIKFLQEKVQKYE-SFPGWNQENEKLMPW------SSNQGPGDGMVDPP 131

Query: 706 VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVNN 527
            +  + +   H+ S K  +  I GA P  +S+ HN  +  +  G +    +   +N   +
Sbjct: 132 NLTKNGSQSGHLFSGKFVDSSIPGA-PMSLSNAHNVAEADMSPGAV---LVPMQSNYYAS 187

Query: 526 LAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLADGAVINQSLNE 347
           +      +Q    P ER  + +          N  SQ Q  W  S  +AD  + +  LNE
Sbjct: 188 VGRGSGFMQ----PQERVISDSD---------NPVSQSQSEWQSSSCMADCNLSSGMLNE 234

Query: 346 KEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVERRSGAAS 167
            EEL+IDEGTI++S+ YS  LL  L++A+ SSG+DLSQA+I+VQINLGK A +R + A  
Sbjct: 235 HEELIIDEGTISISSVYSQGLLTALSQAMASSGVDLSQASISVQINLGKGASKRPTTANM 294

Query: 166 TSCTTNKDMEDL--VSGKQAKGYNRARLMAELPSEASKRQK 50
           ++   + D   +  + G    G N      E   +  KRQK
Sbjct: 295 SNAKDHSDNSHIHQIMGNTVPGSN-----IEESEQVPKRQK 330


>gb|ACN34591.1| unknown [Zea mays] gi|414885909|tpg|DAA61923.1| TPA: putative HLH
           DNA-binding domain superfamily protein [Zea mays]
          Length = 327

 Score =  145 bits (366), Expect = 2e-32
 Identities = 105/279 (37%), Positives = 152/279 (54%)
 Frame = -3

Query: 886 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLLVSH 707
           DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P   S  Q S  +P +    SH
Sbjct: 89  DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLP--WSKGQISGDSPPD---PSH 143

Query: 706 VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVNN 527
            + N S+  ++   +  +   I  +     S   + ++T  ++ G  Y++ +TT N    
Sbjct: 144 FMRNGSSPGSNFTGKLDDNHNIVTS--AAASGAQDQVETDHMASG-CYRSAETTAN---- 196

Query: 526 LAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLADGAVINQSLNE 347
                             TN   SQSQP             W+    + D AV +++LN 
Sbjct: 197 -----------------FTNNAMSQSQP------------QWTGPSPVDDSAVNSETLN- 226

Query: 346 KEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVERRSGAAS 167
            ++L+IDEGTI VS+ YS ELLN+LT AL+SSG+DLSQANI+VQIN+GKRA +R   AA 
Sbjct: 227 NQQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGKRAAKR--PAAG 284

Query: 166 TSCTTNKDMEDLVSGKQAKGYNRARLMAELPSEASKRQK 50
            S  + +  +   S +       +   A+  S A+KR K
Sbjct: 285 VSSNSKEPADPASSNELGHQLTLSGAGADCLSHATKRHK 323


>ref|XP_004957106.1| PREDICTED: transcription factor BIM2-like isoform X2 [Setaria
            italica]
          Length = 513

 Score =  143 bits (361), Expect = 7e-32
 Identities = 113/289 (39%), Positives = 154/289 (53%), Gaps = 10/289 (3%)
 Frame = -3

Query: 886  DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSL-------QQNSNQAPA 728
            DKA+FLLEVIEYIRFLQEKV KYE ++PE +Q++ K++P            +Q+  Q P 
Sbjct: 264  DKATFLLEVIEYIRFLQEKVTKYEATFPEWNQENAKMLPWSNMYFRSFWKNEQSKGQIPG 323

Query: 727  NVLL-VSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQ 551
              L   SH + N S+  ++   +              +   HN + +   SG       Q
Sbjct: 324  ESLPDPSHFMRNGSSPGSNFTGK--------------LDDNHNMVTSAAASGAQD----Q 365

Query: 550  TTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLADGA 371
            T T+P+ ++ F        +      TN T SQSQP             W+    + D A
Sbjct: 366  TETDPMASMCFRSAETPANI------TNNTLSQSQP------------QWTGPSPVDDCA 407

Query: 370  VINQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAV 191
            V ++ LN  + L I+EGTI+VS+ YS ELLN+LT AL+SSG+DLSQA+I+VQINLGKRAV
Sbjct: 408  VNSEMLNN-QPLAINEGTISVSSQYSQELLNSLTHALQSSGVDLSQASISVQINLGKRAV 466

Query: 190  ERRSGAASTSCTTNKDMEDLVSGKQAKGYNRARL--MAELPSEASKRQK 50
            +R   AA  SC   K+  D  S  +  G   A L   AE  S+A+KR K
Sbjct: 467  KR--PAAGVSC---KEPTDPASSDEI-GQQLAMLGGGAEDLSQAAKRHK 509


>ref|XP_004957105.1| PREDICTED: transcription factor BIM2-like isoform X1 [Setaria
           italica]
          Length = 510

 Score =  143 bits (361), Expect = 7e-32
 Identities = 113/289 (39%), Positives = 154/289 (53%), Gaps = 10/289 (3%)
 Frame = -3

Query: 886 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSL-------QQNSNQAPA 728
           DKA+FLLEVIEYIRFLQEKV KYE ++PE +Q++ K++P            +Q+  Q P 
Sbjct: 261 DKATFLLEVIEYIRFLQEKVTKYEATFPEWNQENAKMLPWSNMYFRSFWKNEQSKGQIPG 320

Query: 727 NVLL-VSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQ 551
             L   SH + N S+  ++   +              +   HN + +   SG       Q
Sbjct: 321 ESLPDPSHFMRNGSSPGSNFTGK--------------LDDNHNMVTSAAASGAQD----Q 362

Query: 550 TTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLADGA 371
           T T+P+ ++ F        +      TN T SQSQP             W+    + D A
Sbjct: 363 TETDPMASMCFRSAETPANI------TNNTLSQSQP------------QWTGPSPVDDCA 404

Query: 370 VINQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAV 191
           V ++ LN  + L I+EGTI+VS+ YS ELLN+LT AL+SSG+DLSQA+I+VQINLGKRAV
Sbjct: 405 VNSEMLNN-QPLAINEGTISVSSQYSQELLNSLTHALQSSGVDLSQASISVQINLGKRAV 463

Query: 190 ERRSGAASTSCTTNKDMEDLVSGKQAKGYNRARL--MAELPSEASKRQK 50
           +R   AA  SC   K+  D  S  +  G   A L   AE  S+A+KR K
Sbjct: 464 KR--PAAGVSC---KEPTDPASSDEI-GQQLAMLGGGAEDLSQAAKRHK 506


>ref|XP_004957107.1| PREDICTED: transcription factor BIM2-like isoform X3 [Setaria
           italica]
          Length = 497

 Score =  143 bits (360), Expect = 1e-31
 Identities = 112/282 (39%), Positives = 152/282 (53%), Gaps = 3/282 (1%)
 Frame = -3

Query: 886 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLL-VS 710
           DKA+FLLEVIEYIRFLQEKV KYE ++PE +Q++ K++P       +  Q P   L   S
Sbjct: 261 DKATFLLEVIEYIRFLQEKVTKYEATFPEWNQENAKMLPW------SKGQIPGESLPDPS 314

Query: 709 HVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVN 530
           H + N S+  ++   +              +   HN + +   SG       QT T+P+ 
Sbjct: 315 HFMRNGSSPGSNFTGK--------------LDDNHNMVTSAAASGAQD----QTETDPMA 356

Query: 529 NLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLADGAVINQSLN 350
           ++ F        +      TN T SQSQP             W+    + D AV ++ LN
Sbjct: 357 SMCFRSAETPANI------TNNTLSQSQP------------QWTGPSPVDDCAVNSEMLN 398

Query: 349 EKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVERRSGAA 170
             + L I+EGTI+VS+ YS ELLN+LT AL+SSG+DLSQA+I+VQINLGKRAV+R   AA
Sbjct: 399 N-QPLAINEGTISVSSQYSQELLNSLTHALQSSGVDLSQASISVQINLGKRAVKR--PAA 455

Query: 169 STSCTTNKDMEDLVSGKQAKGYNRARL--MAELPSEASKRQK 50
             SC   K+  D  S  +  G   A L   AE  S+A+KR K
Sbjct: 456 GVSC---KEPTDPASSDEI-GQQLAMLGGGAEDLSQAAKRHK 493


>ref|XP_004973763.1| PREDICTED: transcription factor BIM1-like [Setaria italica]
          Length = 495

 Score =  142 bits (357), Expect = 2e-31
 Identities = 112/289 (38%), Positives = 156/289 (53%), Gaps = 9/289 (3%)
 Frame = -3

Query: 886 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPG-----KLSLQQNSNQAPANV 722
           DKASFLLEVIEYIRFLQEKVQKYE+S+PE +Q++ K+MP      + S + + N+   N 
Sbjct: 246 DKASFLLEVIEYIRFLQEKVQKYEVSHPEWNQENAKIMPWSNIYFRSSWKNSQNKDEING 305

Query: 721 LLVSH---VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQ 551
            +VS     V  + ++P    + KT +   AGA  T   +     +   + G + +K  +
Sbjct: 306 DMVSSDPTQVTKNGSSPRFPFAAKTEDHNNAGAFETAPGAQ----ELAELKGCVPFKQAE 361

Query: 550 TTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLADGA 371
           T  N                      TNT  SQ Q  +  NS+  D           D A
Sbjct: 362 TPNNV---------------------TNTVASQQQA-QLTNSSPSD-----------DSA 388

Query: 370 VINQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAV 191
           V N  LN  E L IDEGTI++S+ YS  LL TL  AL++SG+DLSQA+I+VQINLGKRA 
Sbjct: 389 VPNGMLNNPE-LAIDEGTISLSSQYSQGLLTTLNLALQNSGVDLSQASISVQINLGKRAT 447

Query: 190 ERRSGAASTSCTTNKDMEDLVSGKQAKGYN-RARLMAELPSEASKRQKT 47
           +R   +A  S +T+KD+ +  S  Q  G+  R+   A   ++A+KR K+
Sbjct: 448 KR---SAPVSNSTSKDLINQASRDQEIGHQLRSGDGAREHTQATKRHKS 493


>gb|EOY22175.1| Transcription factor BIM1, putative isoform 3 [Theobroma cacao]
          Length = 564

 Score =  142 bits (357), Expect = 2e-31
 Identities = 102/244 (41%), Positives = 140/244 (57%), Gaps = 3/244 (1%)
 Frame = -3

Query: 886  DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLLVSH 707
            DKASFLLEVIEYI+FLQEKV KYE +Y   S +  KLMP +     N+++   N    S 
Sbjct: 297  DKASFLLEVIEYIQFLQEKVHKYEGTYQGWSHEPSKLMPWR-----NNHRPTENYADQSQ 351

Query: 706  VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVNN 527
             +N  SA PA V S K +E  I  A PT+  S HNP+++ + S   +++ I  +   +N 
Sbjct: 352  AINGVSA-PALVFSAKFDEKNITVA-PTIPGSAHNPIESDM-STATTFRAIDLSPGMMNK 408

Query: 526  LAFTHNLLQTKLFPLERETNTTQS--QSQPFEAYNSTSQDQCGWSESCSLA-DGAVINQS 356
                   LQ   F   + T          P +  N  SQ Q     S S   DGA+ ++ 
Sbjct: 409  TMPFPVSLQPNFFASAQSTGAAAQLVPRLPSDVANCASQPQSIACHSGSFTTDGALPSEK 468

Query: 355  LNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVERRSG 176
            L E +EL I+ GTI++S+ YS  LLNTLT+AL++SG+DLS A+I+VQI LGKR+  R + 
Sbjct: 469  LKE-QELTIEGGTISISSVYSQGLLNTLTQALQTSGVDLSHASISVQIELGKRSSSRPTA 527

Query: 175  AAST 164
            +AST
Sbjct: 528  SAST 531


>gb|EOY22174.1| Transcription factor BIM1, putative isoform 2 [Theobroma cacao]
          Length = 564

 Score =  142 bits (357), Expect = 2e-31
 Identities = 102/244 (41%), Positives = 140/244 (57%), Gaps = 3/244 (1%)
 Frame = -3

Query: 886  DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLLVSH 707
            DKASFLLEVIEYI+FLQEKV KYE +Y   S +  KLMP +     N+++   N    S 
Sbjct: 297  DKASFLLEVIEYIQFLQEKVHKYEGTYQGWSHEPSKLMPWR-----NNHRPTENYADQSQ 351

Query: 706  VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVNN 527
             +N  SA PA V S K +E  I  A PT+  S HNP+++ + S   +++ I  +   +N 
Sbjct: 352  AINGVSA-PALVFSAKFDEKNITVA-PTIPGSAHNPIESDM-STATTFRAIDLSPGMMNK 408

Query: 526  LAFTHNLLQTKLFPLERETNTTQS--QSQPFEAYNSTSQDQCGWSESCSLA-DGAVINQS 356
                   LQ   F   + T          P +  N  SQ Q     S S   DGA+ ++ 
Sbjct: 409  TMPFPVSLQPNFFASAQSTGAAAQLVPRLPSDVANCASQPQSIACHSGSFTTDGALPSEK 468

Query: 355  LNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVERRSG 176
            L E +EL I+ GTI++S+ YS  LLNTLT+AL++SG+DLS A+I+VQI LGKR+  R + 
Sbjct: 469  LKE-QELTIEGGTISISSVYSQGLLNTLTQALQTSGVDLSHASISVQIELGKRSSSRPTA 527

Query: 175  AAST 164
            +AST
Sbjct: 528  SAST 531


>gb|EOY22173.1| Transcription factor BIM1, putative isoform 1 [Theobroma cacao]
          Length = 614

 Score =  142 bits (357), Expect = 2e-31
 Identities = 102/244 (41%), Positives = 140/244 (57%), Gaps = 3/244 (1%)
 Frame = -3

Query: 886  DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLLVSH 707
            DKASFLLEVIEYI+FLQEKV KYE +Y   S +  KLMP +     N+++   N    S 
Sbjct: 347  DKASFLLEVIEYIQFLQEKVHKYEGTYQGWSHEPSKLMPWR-----NNHRPTENYADQSQ 401

Query: 706  VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVNN 527
             +N  SA PA V S K +E  I  A PT+  S HNP+++ + S   +++ I  +   +N 
Sbjct: 402  AINGVSA-PALVFSAKFDEKNITVA-PTIPGSAHNPIESDM-STATTFRAIDLSPGMMNK 458

Query: 526  LAFTHNLLQTKLFPLERETNTTQS--QSQPFEAYNSTSQDQCGWSESCSLA-DGAVINQS 356
                   LQ   F   + T          P +  N  SQ Q     S S   DGA+ ++ 
Sbjct: 459  TMPFPVSLQPNFFASAQSTGAAAQLVPRLPSDVANCASQPQSIACHSGSFTTDGALPSEK 518

Query: 355  LNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVERRSG 176
            L E +EL I+ GTI++S+ YS  LLNTLT+AL++SG+DLS A+I+VQI LGKR+  R + 
Sbjct: 519  LKE-QELTIEGGTISISSVYSQGLLNTLTQALQTSGVDLSHASISVQIELGKRSSSRPTA 577

Query: 175  AAST 164
            +AST
Sbjct: 578  SAST 581


>tpg|DAA61920.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 514

 Score =  141 bits (356), Expect = 3e-31
 Identities = 105/290 (36%), Positives = 152/290 (52%), Gaps = 11/290 (3%)
 Frame = -3

Query: 886  DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-----------GKLSLQQNSN 740
            DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P              S  Q S 
Sbjct: 263  DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISG 322

Query: 739  QAPANVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYK 560
             +P +    SH + N S+  ++   +  +   I  +     S   + ++T  ++ G  Y+
Sbjct: 323  DSPPD---PSHFMRNGSSPGSNFTGKLDDNHNIVTS--AAASGAQDQVETDHMASG-CYR 376

Query: 559  TIQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLA 380
            + +TT N                      TN   SQSQP             W+    + 
Sbjct: 377  SAETTAN---------------------FTNNAMSQSQP------------QWTGPSPVD 403

Query: 379  DGAVINQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGK 200
            D AV +++LN  ++L+IDEGTI VS+ YS ELLN+LT AL+SSG+DLSQANI+VQIN+GK
Sbjct: 404  DSAVNSETLN-NQQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGK 462

Query: 199  RAVERRSGAASTSCTTNKDMEDLVSGKQAKGYNRARLMAELPSEASKRQK 50
            RA +R   AA  S  + +  +   S +       +   A+  S A+KR K
Sbjct: 463  RAAKR--PAAGVSSNSKEPADPASSNELGHQLTLSGAGADCLSHATKRHK 510


>gb|ACN36276.1| unknown [Zea mays] gi|414885908|tpg|DAA61922.1| TPA: putative HLH
           DNA-binding domain superfamily protein [Zea mays]
          Length = 340

 Score =  141 bits (356), Expect = 3e-31
 Identities = 105/290 (36%), Positives = 152/290 (52%), Gaps = 11/290 (3%)
 Frame = -3

Query: 886 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-----------GKLSLQQNSN 740
           DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P              S  Q S 
Sbjct: 89  DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISG 148

Query: 739 QAPANVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYK 560
            +P +    SH + N S+  ++   +  +   I  +     S   + ++T  ++ G  Y+
Sbjct: 149 DSPPD---PSHFMRNGSSPGSNFTGKLDDNHNIVTS--AAASGAQDQVETDHMASG-CYR 202

Query: 559 TIQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLA 380
           + +TT N                      TN   SQSQP             W+    + 
Sbjct: 203 SAETTAN---------------------FTNNAMSQSQP------------QWTGPSPVD 229

Query: 379 DGAVINQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGK 200
           D AV +++LN  ++L+IDEGTI VS+ YS ELLN+LT AL+SSG+DLSQANI+VQIN+GK
Sbjct: 230 DSAVNSETLN-NQQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGK 288

Query: 199 RAVERRSGAASTSCTTNKDMEDLVSGKQAKGYNRARLMAELPSEASKRQK 50
           RA +R   AA  S  + +  +   S +       +   A+  S A+KR K
Sbjct: 289 RAAKR--PAAGVSSNSKEPADPASSNELGHQLTLSGAGADCLSHATKRHK 336


>gb|ACL52596.1| unknown [Zea mays] gi|414885905|tpg|DAA61919.1| TPA: putative HLH
            DNA-binding domain superfamily protein [Zea mays]
          Length = 515

 Score =  141 bits (356), Expect = 3e-31
 Identities = 105/290 (36%), Positives = 152/290 (52%), Gaps = 11/290 (3%)
 Frame = -3

Query: 886  DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-----------GKLSLQQNSN 740
            DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P              S  Q S 
Sbjct: 264  DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISG 323

Query: 739  QAPANVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYK 560
             +P +    SH + N S+  ++   +  +   I  +     S   + ++T  ++ G  Y+
Sbjct: 324  DSPPD---PSHFMRNGSSPGSNFTGKLDDNHNIVTS--AAASGAQDQVETDHMASG-CYR 377

Query: 559  TIQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLA 380
            + +TT N                      TN   SQSQP             W+    + 
Sbjct: 378  SAETTAN---------------------FTNNAMSQSQP------------QWTGPSPVD 404

Query: 379  DGAVINQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGK 200
            D AV +++LN  ++L+IDEGTI VS+ YS ELLN+LT AL+SSG+DLSQANI+VQIN+GK
Sbjct: 405  DSAVNSETLN-NQQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGK 463

Query: 199  RAVERRSGAASTSCTTNKDMEDLVSGKQAKGYNRARLMAELPSEASKRQK 50
            RA +R   AA  S  + +  +   S +       +   A+  S A+KR K
Sbjct: 464  RAAKR--PAAGVSSNSKEPADPASSNELGHQLTLSGAGADCLSHATKRHK 511


>ref|NP_001130805.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
           gi|194690162|gb|ACF79165.1| unknown [Zea mays]
           gi|414885907|tpg|DAA61921.1| TPA: putative HLH
           DNA-binding domain superfamily protein [Zea mays]
          Length = 478

 Score =  141 bits (356), Expect = 3e-31
 Identities = 105/290 (36%), Positives = 152/290 (52%), Gaps = 11/290 (3%)
 Frame = -3

Query: 886 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-----------GKLSLQQNSN 740
           DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P              S  Q S 
Sbjct: 227 DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISG 286

Query: 739 QAPANVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYK 560
            +P +    SH + N S+  ++   +  +   I  +     S   + ++T  ++ G  Y+
Sbjct: 287 DSPPD---PSHFMRNGSSPGSNFTGKLDDNHNIVTS--AAASGAQDQVETDHMASG-CYR 340

Query: 559 TIQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLA 380
           + +TT N                      TN   SQSQP             W+    + 
Sbjct: 341 SAETTAN---------------------FTNNAMSQSQP------------QWTGPSPVD 367

Query: 379 DGAVINQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGK 200
           D AV +++LN  ++L+IDEGTI VS+ YS ELLN+LT AL+SSG+DLSQANI+VQIN+GK
Sbjct: 368 DSAVNSETLN-NQQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGK 426

Query: 199 RAVERRSGAASTSCTTNKDMEDLVSGKQAKGYNRARLMAELPSEASKRQK 50
           RA +R   AA  S  + +  +   S +       +   A+  S A+KR K
Sbjct: 427 RAAKR--PAAGVSSNSKEPADPASSNELGHQLTLSGAGADCLSHATKRHK 474


>ref|XP_003578285.1| PREDICTED: transcription factor BIM1-like [Brachypodium distachyon]
          Length = 477

 Score =  140 bits (353), Expect = 6e-31
 Identities = 112/288 (38%), Positives = 147/288 (51%), Gaps = 8/288 (2%)
 Frame = -3

Query: 886 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-------GKLSLQQNSNQAPA 728
           DKA+FLLEVIEYIRFLQEK QKYE S+PE +Q++ KL+P             Q+  Q P 
Sbjct: 234 DKATFLLEVIEYIRFLQEKAQKYEASFPEWNQENAKLLPWSNIYFRSSWKSAQSKGQIPE 293

Query: 727 NVLL-VSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQ 551
           + L   S  V N S+   ++  +              +   H    T V SG ++     
Sbjct: 294 DALPDPSQFVTNGSSPGFNITGK--------------LDDNH----TTVASGAVA----- 330

Query: 550 TTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLADGA 371
                  +LA   ++        E   N T          N TSQ Q  W+    + D A
Sbjct: 331 ----GTPDLAENDHMASVSCRSAETPINITN---------NVTSQYQPQWAGPSGVDDCA 377

Query: 370 VINQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAV 191
           V +  LN+ ++L IDEGTI+VS+ YS ELLNTLT AL+SSGIDLSQANI+VQINLGKRAV
Sbjct: 378 VNSSMLND-QQLTIDEGTISVSSQYSQELLNTLTHALQSSGIDLSQANISVQINLGKRAV 436

Query: 190 ERRSGAASTSCTTNKDMEDLVSGKQAKGYNRARLMAELPSEASKRQKT 47
           +R     S+S   +K++ D          N      ELP  A+KR K+
Sbjct: 437 KRSVAGQSSS---SKELTD------PDPSNEMVAAEELP-HATKRHKS 474


>ref|XP_006661342.1| PREDICTED: transcription factor BIM1-like [Oryza brachyantha]
          Length = 442

 Score =  140 bits (352), Expect = 8e-31
 Identities = 107/292 (36%), Positives = 154/292 (52%), Gaps = 12/292 (4%)
 Frame = -3

Query: 886 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGK-------LSLQQNSNQAPA 728
           DKA+FLLEVIEYIRFLQEKVQKYE S PE +Q++ K++P             Q+  Q P 
Sbjct: 190 DKATFLLEVIEYIRFLQEKVQKYETSAPEWNQENAKILPWSNIYFRSFWKNSQSKGQTPG 249

Query: 727 NVLL-VSHVVNNDSAAPAHVVSEKT-NEIKIAGARPTLISSTHNPLKTCVVSGGISYKTI 554
           + L   S  + N S++  +   +   N   +  A     S     L+T   +  +SY++ 
Sbjct: 250 DDLPDPSQFIRNGSSSGFNFTGKPDDNHTMVTSAAA---SGAQEQLETDHTAS-VSYRSA 305

Query: 553 QTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLADG 374
           +T TN  NN+                                 TSQ Q  W+    + D 
Sbjct: 306 ETPTNITNNV---------------------------------TSQVQTQWASPSGVDDC 332

Query: 373 AVINQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRA 194
           A+ ++ LN  ++L IDEGTI++ST YS +LL TLT AL+SSG+DLSQA+++VQINLGKRA
Sbjct: 333 AMNSEILNN-QQLAIDEGTISLSTQYSQQLLGTLTHALESSGVDLSQASLSVQINLGKRA 391

Query: 193 VERRSGAASTSCTTNKDMEDLVSGKQAKGYNRARL---MAELPSEASKRQKT 47
           V+R  G  S+S   +K++ +  S  +  G+    L     ELP  ++KR K+
Sbjct: 392 VKRPGGDGSSS---SKELPNPSSNNENMGHQLTMLGGGAEELP-HSTKRHKS 439


>gb|ACG28929.1| transcription factor BIM2 [Zea mays]
          Length = 514

 Score =  138 bits (348), Expect = 2e-30
 Identities = 104/290 (35%), Positives = 151/290 (52%), Gaps = 11/290 (3%)
 Frame = -3

Query: 886  DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-----------GKLSLQQNSN 740
            DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P              S  Q S 
Sbjct: 263  DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISG 322

Query: 739  QAPANVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYK 560
             +P +    SH + N S+  ++   +  +   I  +     S   +  +T  ++ G  Y+
Sbjct: 323  DSPPD---PSHFMRNGSSPGSNFTGKLDDNHNIVTS--AAASGAQDQAETDHMASG-CYR 376

Query: 559  TIQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLA 380
            + +TT N                      TN   SQSQP             W+    + 
Sbjct: 377  SAETTAN---------------------FTNNAMSQSQP------------QWTGPSPVD 403

Query: 379  DGAVINQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGK 200
            D A+ +++LN  ++L+IDEGTI VS+ YS ELLN+LT AL+SSG+DLSQANI+VQIN+GK
Sbjct: 404  DSAMNSETLN-NQQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGK 462

Query: 199  RAVERRSGAASTSCTTNKDMEDLVSGKQAKGYNRARLMAELPSEASKRQK 50
            RA +R   AA  S  + +  +   S +       +   A+  S A+KR K
Sbjct: 463  RAAKR--PAAGVSSNSKEPADPASSNELGHQLTLSGAGADGLSHATKRHK 510


>ref|NP_001062109.1| Os08g0490000 [Oryza sativa Japonica Group]
            gi|42408484|dbj|BAD09664.1| bHLH protein family-like
            [Oryza sativa Japonica Group]
            gi|113624078|dbj|BAF24023.1| Os08g0490000 [Oryza sativa
            Japonica Group] gi|215712355|dbj|BAG94482.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218201360|gb|EEC83787.1| hypothetical protein
            OsI_29691 [Oryza sativa Indica Group]
            gi|323388945|gb|ADX60277.1| bHLH transcription factor
            [Oryza sativa Japonica Group]
          Length = 508

 Score =  137 bits (345), Expect = 5e-30
 Identities = 109/291 (37%), Positives = 153/291 (52%), Gaps = 11/291 (3%)
 Frame = -3

Query: 886  DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-------GKLSLQQNSNQAPA 728
            DKASFLLEVIEYIRFLQEKVQKYE+SYPE +Q++ K++P             QN  Q PA
Sbjct: 256  DKASFLLEVIEYIRFLQEKVQKYEVSYPEWNQENAKVVPWTNIYFRSSWKNAQNKGQVPA 315

Query: 727  NVLL-VSHVVNNDSAA--PAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKT 557
            +       ++ N S    P    S+  N ++ A A      +  +P+        +SY++
Sbjct: 316  DHSPDPPELLKNGSPYMFPFTGNSDNNNAVETAAASGAQDQAETDPMSR------VSYRS 369

Query: 556  IQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLAD 377
            + T +   NN+A               +  T+Q  +Q                   S A+
Sbjct: 370  VDTPSP--NNVA---------------DKVTSQPHAQLVRP---------------SPAE 397

Query: 376  GAVINQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKR 197
               +N       +L IDEGTI++S+ YS ELLN L  AL++SGIDLSQA+I+VQINLGKR
Sbjct: 398  NHTVNCDKLNNSDLAIDEGTISLSSQYSQELLNKLNHALENSGIDLSQASISVQINLGKR 457

Query: 196  AVERRSGAASTSCTTNKDMEDLVSGKQAKGYN-RARLMAELPSEASKRQKT 47
            A++R + AA+   +T+K++ D  S  QA G   R    AE   +ASKR K+
Sbjct: 458  AMKRSTPAAT---STSKELTDPASNSQAMGRQLRLGDGAEEHRQASKRHKS 505


>gb|EEE68905.1| hypothetical protein OsJ_27750 [Oryza sativa Japonica Group]
          Length = 467

 Score =  137 bits (345), Expect = 5e-30
 Identities = 109/291 (37%), Positives = 153/291 (52%), Gaps = 11/291 (3%)
 Frame = -3

Query: 886 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-------GKLSLQQNSNQAPA 728
           DKASFLLEVIEYIRFLQEKVQKYE+SYPE +Q++ K++P             QN  Q PA
Sbjct: 215 DKASFLLEVIEYIRFLQEKVQKYEVSYPEWNQENAKVVPWTNIYFRSSWKNAQNKGQVPA 274

Query: 727 NVLL-VSHVVNNDSAA--PAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKT 557
           +       ++ N S    P    S+  N ++ A A      +  +P+        +SY++
Sbjct: 275 DHSPDPPELLKNGSPYMFPFTGNSDNNNAVETAAASGAQDQAETDPMSR------VSYRS 328

Query: 556 IQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSTSQDQCGWSESCSLAD 377
           + T +   NN+A               +  T+Q  +Q                   S A+
Sbjct: 329 VDTPSP--NNVA---------------DKVTSQPHAQLVRP---------------SPAE 356

Query: 376 GAVINQSLNEKEELLIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKR 197
              +N       +L IDEGTI++S+ YS ELLN L  AL++SGIDLSQA+I+VQINLGKR
Sbjct: 357 NHTVNCDKLNNSDLAIDEGTISLSSQYSQELLNKLNHALENSGIDLSQASISVQINLGKR 416

Query: 196 AVERRSGAASTSCTTNKDMEDLVSGKQAKGYN-RARLMAELPSEASKRQKT 47
           A++R + AA+   +T+K++ D  S  QA G   R    AE   +ASKR K+
Sbjct: 417 AMKRSTPAAT---STSKELTDPASNSQAMGRQLRLGDGAEEHRQASKRHKS 464