BLASTX nr result

ID: Zingiber24_contig00018001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00018001
         (640 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ12357.1| hypothetical protein PRUPE_ppa027142mg, partial [...    62   2e-07
ref|XP_006659212.1| PREDICTED: uncharacterized protein LOC102718...    61   2e-07
gb|EEE68228.1| hypothetical protein OsJ_26412 [Oryza sativa Japo...    61   3e-07
ref|XP_006652814.1| PREDICTED: methyl-CpG-binding domain-contain...    58   3e-06
ref|XP_006652812.1| PREDICTED: methyl-CpG-binding domain-contain...    58   3e-06
gb|AFW61002.1| hypothetical protein ZEAMMB73_269384 [Zea mays]         56   8e-06
emb|CBI31785.3| unnamed protein product [Vitis vinifera]               56   8e-06
ref|XP_002444023.1| hypothetical protein SORBIDRAFT_07g006030 [S...    56   8e-06

>gb|EMJ12357.1| hypothetical protein PRUPE_ppa027142mg, partial [Prunus persica]
          Length = 747

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 52/162 (32%), Positives = 72/162 (44%), Gaps = 37/162 (22%)
 Frame = +2

Query: 8   KPIKKPLRASKRLAALKDTQMANP--------SAAGESHKAKP-------DAFSQVQEK- 139
           K IK P R+SKRLA ++   + N         +A G S K+K        D  SQ+ E  
Sbjct: 408 KEIKLPHRSSKRLAGVEPELLPNSMSSERALRNATGRSSKSKAIQAVNSADEASQLPEAG 467

Query: 140 --------PATTIVDQ--PPQLDSATGSFYEQKPLLLGRS-----------NNEKPYEST 256
                   P TT +D   P Q  + + +F E + +   +S           N E  +   
Sbjct: 468 PETKFANYPCTTTIDTSIPEQSSNKSENFLEDQAIPQEKSQKFETEKAAIENPEAQFSFP 527

Query: 257 LCSSWSDPCLEFAFKMLTSDIPIFEDTDTVQEYFSQLASTNN 382
              SWSDPCL+FAFK LT  IPI  + D  Q YF +   T++
Sbjct: 528 FMDSWSDPCLDFAFKTLTGAIPI--EDDLFQGYFQEKIETSH 567


>ref|XP_006659212.1| PREDICTED: uncharacterized protein LOC102718198 [Oryza brachyantha]
          Length = 1007

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 26/53 (49%), Positives = 37/53 (69%)
 Frame = +2

Query: 263  SSWSDPCLEFAFKMLTSDIPIFEDTDTVQEYFSQLASTNNPISSVPTSFSECP 421
            +SWSDPC+EFAFK LT DIP+ +DT  V+EYF Q     + ++ +P+ +S  P
Sbjct: 918  NSWSDPCIEFAFKTLTGDIPVLDDTSAVEEYFPQ-----HDLNKLPSDYSASP 965


>gb|EEE68228.1| hypothetical protein OsJ_26412 [Oryza sativa Japonica Group]
          Length = 899

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
 Frame = +2

Query: 131  QEKPATTIVDQPPQLDSATGSFYEQKPLLLGRSNNEKPYE------------STLCSSWS 274
            QE P +   D  P + SA    Y+  P          P+             S   +SWS
Sbjct: 756  QELPVSMQTDGKPVVSSALNVEYQNVPATAPAQPTRAPHPEAASYPSGLAVPSLFGNSWS 815

Query: 275  DPCLEFAFKMLTSDIPIFEDTDTVQEYFSQLASTNNP---ISSVPTSFS 412
            DPC+EFAFK L  DIP+ +DT  V++YF Q      P    S+ P+ FS
Sbjct: 816  DPCIEFAFKTLRGDIPVLDDTSAVEQYFPQHDLNKPPSPDYSASPSCFS 864


>ref|XP_006652814.1| PREDICTED: methyl-CpG-binding domain-containing protein 13-like
           isoform X3 [Oryza brachyantha]
          Length = 365

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 46/135 (34%), Positives = 58/135 (42%), Gaps = 26/135 (19%)
 Frame = +2

Query: 5   VKPIKKPLRASKRLAALKDTQMANPSAAGESHKAKPDAFSQVQ------EKPATTIVDQP 166
           VK I  PLRAS RLAALK  Q AN     E      D  +Q+Q      +K        P
Sbjct: 179 VKQIATPLRASPRLAALKINQEANNVPKDEPPSMHADTANQLQPKCSERQKAKANSSVLP 238

Query: 167 PQLDS-----ATGSFYEQKPLLLGRSNNEKPY---------------ESTLCSSWSDPCL 286
            + D+     A+G+   + P    +      Y                S L S WSDPCL
Sbjct: 239 EKKDASHTSNASGNVKNKYPSATEQIQGSSVYPQQVGTADAMPGSAISSLLRSIWSDPCL 298

Query: 287 EFAFKMLTSDIPIFE 331
           +FAFK LT DIP+ +
Sbjct: 299 KFAFKTLTGDIPVLD 313


>ref|XP_006652812.1| PREDICTED: methyl-CpG-binding domain-containing protein 13-like
           isoform X1 [Oryza brachyantha]
           gi|573940825|ref|XP_006652813.1| PREDICTED:
           methyl-CpG-binding domain-containing protein 13-like
           isoform X2 [Oryza brachyantha]
          Length = 393

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 46/135 (34%), Positives = 58/135 (42%), Gaps = 26/135 (19%)
 Frame = +2

Query: 5   VKPIKKPLRASKRLAALKDTQMANPSAAGESHKAKPDAFSQVQ------EKPATTIVDQP 166
           VK I  PLRAS RLAALK  Q AN     E      D  +Q+Q      +K        P
Sbjct: 207 VKQIATPLRASPRLAALKINQEANNVPKDEPPSMHADTANQLQPKCSERQKAKANSSVLP 266

Query: 167 PQLDS-----ATGSFYEQKPLLLGRSNNEKPY---------------ESTLCSSWSDPCL 286
            + D+     A+G+   + P    +      Y                S L S WSDPCL
Sbjct: 267 EKKDASHTSNASGNVKNKYPSATEQIQGSSVYPQQVGTADAMPGSAISSLLRSIWSDPCL 326

Query: 287 EFAFKMLTSDIPIFE 331
           +FAFK LT DIP+ +
Sbjct: 327 KFAFKTLTGDIPVLD 341


>gb|AFW61002.1| hypothetical protein ZEAMMB73_269384 [Zea mays]
          Length = 921

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/57 (42%), Positives = 33/57 (57%)
 Frame = +2

Query: 209 PLLLGRSNNEKPYESTLCSSWSDPCLEFAFKMLTSDIPIFEDTDTVQEYFSQLASTN 379
           P   G   +   ++S   + WSDPC+EFAFK LT DIP+ +DT  V +YF +    N
Sbjct: 824 PAEAGSDQSGLAFQSVFGNIWSDPCIEFAFKTLTGDIPVLDDTTAVTDYFPEQQDLN 880


>emb|CBI31785.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 50/139 (35%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
 Frame = +2

Query: 23  PLRASKRLAAL--------KDTQMANPSAAG-------ESHKAKPDAFSQVQEKPATTIV 157
           P RASKRLA L        K T   +  AAG       E    K +A ++ +EK   ++ 
Sbjct: 290 PRRASKRLAGLEADVTPELKTTNRGSRVAAGHSGEIEAEEQAEKVEAENKDKEKHGCSLS 349

Query: 158 ----DQPPQLDSATGSFYEQKPLLLGRSNNEKPYESTLCSSWSDPCLEFAFKMLTSDIPI 325
               D P  ++ A  +  E K    G  N E P+E     SW+DPC+EFA K LTSD   
Sbjct: 350 LPLGDGPIPIEHAGVAEDENK----GAGNPEPPHELPFGDSWTDPCIEFAIKTLTSDHLF 405

Query: 326 FEDTDTVQEYFSQLASTNN 382
            ED    Q+  S  A TNN
Sbjct: 406 IEDY-FQQQLSSPHAQTNN 423


>ref|XP_002444023.1| hypothetical protein SORBIDRAFT_07g006030 [Sorghum bicolor]
            gi|241940373|gb|EES13518.1| hypothetical protein
            SORBIDRAFT_07g006030 [Sorghum bicolor]
          Length = 961

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/57 (42%), Positives = 33/57 (57%)
 Frame = +2

Query: 209  PLLLGRSNNEKPYESTLCSSWSDPCLEFAFKMLTSDIPIFEDTDTVQEYFSQLASTN 379
            P   G   +   ++S   + WSDPC+EFAFK LT DIP+ +DT  V +YF +    N
Sbjct: 863  PTETGSDQSGLAFQSAFGNIWSDPCIEFAFKTLTGDIPVLDDTTAVTDYFPEQQDLN 919


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