BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00017963
         (2115 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   681   0.0  
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   677   0.0  
gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]       675   0.0  
ref|XP_002517017.1| conserved hypothetical protein [Ricinus comm...   674   0.0  
gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus pe...   674   0.0  
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu...   672   0.0  
ref|XP_006663567.1| PREDICTED: chloroplastic group IIA intron sp...   668   0.0  
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp...   665   0.0  
ref|XP_006838849.1| hypothetical protein AMTR_s00002p00265220 [A...   665   0.0  
ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron sp...   662   0.0  
gb|ABA94534.1| CRS1/YhbY domain containing protein, expressed [O...   661   0.0  
ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp...   659   0.0  
dbj|BAJ90192.1| predicted protein [Hordeum vulgare subsp. vulgare]    659   0.0  
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp...   657   0.0  
ref|XP_003590782.1| Chloroplastic group IIA intron splicing faci...   655   0.0  
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp...   653   0.0  
ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citr...   652   0.0  
ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citr...   652   0.0  
ref|XP_003577404.1| PREDICTED: chloroplastic group IIA intron sp...   651   0.0  
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp...   649   0.0  

>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
            gi|297737163|emb|CBI26364.3| unnamed protein product
            [Vitis vinifera]
          Length = 902

 Score =  681 bits (1756), Expect = 0.0
 Identities = 353/522 (67%), Positives = 413/522 (79%), Gaps = 7/522 (1%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRDT-YSLAQASEFSRGN 178
            TGGLVIWRSGTS+SLYRGV+YE+P  +  R         +SF   T  S A +S  + GN
Sbjct: 287  TGGLVIWRSGTSVSLYRGVSYEVPVQLNKRVYKKNETSHSSFSSITPNSFAISSNKTSGN 346

Query: 179  -----HMEDFHEG-VSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVD 340
                   ++ H    +  +   ++     E  Y+ EIDKLLD LGPRYTDWPG  P P+D
Sbjct: 347  APAVGSNQNVHASQATLNITDGENKDTESEVKYEDEIDKLLDGLGPRYTDWPGCDPLPID 406

Query: 341  ADLLPGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAI 520
            ADLLPG + GY+PPFRILPYGV+ +LGLKE TALRRL+RVLPPHFALGRSR+ +GLA+A+
Sbjct: 407  ADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLPPHFALGRSRQLEGLAMAM 466

Query: 521  VKLWEKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEIT 700
            +KLWE+SSIAK++LKRGVQLT+SERMAE+IKKLTGG +LSRNKD++V YRGK+FLS ++T
Sbjct: 467  IKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSSDVT 526

Query: 701  EALLERERLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGNDIDD 880
            EALLERERLAK LQDEEEQARLRAS+ +        + G AGTLGETLEA ARWG  +DD
Sbjct: 527  EALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEADARWGKRLDD 586

Query: 881  DHANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPIT 1060
                KM++ AE+ RHAN+VRKLER L +AE+K+ KA   L+KVEE LKPA    DPE IT
Sbjct: 587  HDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPANRPADPESIT 646

Query: 1061 EEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVAL 1240
            +EERFMFRKLGLRMKAFLLLGRRGVF GT+ENMHLHWKYRELVKII+KAKTF QVK  AL
Sbjct: 647  DEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTAL 706

Query: 1241 ALEAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREAL 1420
            ALE+ESGGVLV VDKVSKGFAIVV+RG+DY RP TLRPKNLLTKRKALARSIELQRREAL
Sbjct: 707  ALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRREAL 766

Query: 1421 NRHISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCS 1546
              HIS LQ+ V++LRSE+ QMD+ KD GDEELY KLDSAY +
Sbjct: 767  YNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAYAT 808


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  677 bits (1748), Expect = 0.0
 Identities = 352/522 (67%), Positives = 412/522 (78%), Gaps = 7/522 (1%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRDT-YSLAQASEFSRGN 178
            TGGLVIWRSGTS+SLYRGV+YE+P  +  R         +SF   T  S A +S  + GN
Sbjct: 287  TGGLVIWRSGTSVSLYRGVSYEVPVQLNKRVYKKNETSHSSFSSITPNSFAISSNKTSGN 346

Query: 179  -----HMEDFHEG-VSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVD 340
                   ++ H    +  +   ++     E  Y+ EIDKLLD LGPRYTDWP   P P+D
Sbjct: 347  APAVGSNQNVHASQATLXITDGENKDTESEVKYEDEIDKLLDGLGPRYTDWPXCDPLPID 406

Query: 341  ADLLPGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAI 520
            ADLLPG + GY+PPFRILPYGV+ +LGLKE TALRRL+RVLPPHFALGRSR+ +GLA+A+
Sbjct: 407  ADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLPPHFALGRSRQLEGLAMAM 466

Query: 521  VKLWEKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEIT 700
            +KLWE+SSIAK++LKRGVQLT+SERMAE+IKKLTGG +LSRNKD++V YRGK+FLS ++T
Sbjct: 467  IKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSSDVT 526

Query: 701  EALLERERLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGNDIDD 880
            EALLERERLAK LQDEEEQARLRAS+ +        + G AGTLGETLEA ARWG  +DD
Sbjct: 527  EALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEADARWGKRLDD 586

Query: 881  DHANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPIT 1060
                KM++ AE+ RHAN+VRKLER L +AE+K+ KA   L+KVEE LKPA    DPE IT
Sbjct: 587  HDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPANRPADPESIT 646

Query: 1061 EEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVAL 1240
            +EERFMFRKLGLRMKAFLLLGRRGVF GT+ENMHLHWKYRELVKII+KAKTF QVK  AL
Sbjct: 647  DEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTAL 706

Query: 1241 ALEAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREAL 1420
            ALE+ESGGVLV VDKVSKGFAIVV+RG+DY RP TLRPKNLLTKRKALARSIELQRREAL
Sbjct: 707  ALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRREAL 766

Query: 1421 NRHISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCS 1546
              HIS LQ+ V++LRSE+ QMD+ KD GDEELY KLDSAY +
Sbjct: 767  YNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAYAT 808


>gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]
          Length = 876

 Score =  675 bits (1742), Expect = 0.0
 Identities = 349/551 (63%), Positives = 429/551 (77%), Gaps = 10/551 (1%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRD---TYSLAQASEFSR 172
            TGGLVIWRSGTS+SLYRGV+YE+P                 +KR+   TY+L   S+ ++
Sbjct: 304  TGGLVIWRSGTSVSLYRGVSYEVPSV---------HLSKRIYKRNETFTYALPSVSDKTK 354

Query: 173  -----GNHMEDFHEGVSAEV--DKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPP 331
                 G+H +      ++E   +  KD +  PE  Y+ E+DKLL+ LGPRYTDWPG  P 
Sbjct: 355  DLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPL 414

Query: 332  PVDADLLPGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLA 511
            PVDADLLPG+V GY+PPFR+LPYGV+ +LGLKE T+LRRL+RVLPPHFA+GRSR+ QGLA
Sbjct: 415  PVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLA 474

Query: 512  LAIVKLWEKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSP 691
            +A++KLWEKSSIAKI+LKRGVQLT+SERMAE+IKKLTGG +LSRNKD++V YRGK+FLS 
Sbjct: 475  VAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKNFLSA 534

Query: 692  EITEALLERERLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGND 871
            ++ EAL+ERERLAK+LQDEEEQARLRAS+ +  +     + G AGTLGETL+A ARWG  
Sbjct: 535  DVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGTLGETLDADARWGKR 594

Query: 872  IDDDHANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPE 1051
            +D+ H  K+++ AE+ RHAN+VRKL++NL  A++K+ KA R L KVE+ LKPA+   DPE
Sbjct: 595  LDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALTKVEDYLKPADRQADPE 654

Query: 1052 PITEEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKN 1231
             IT+EERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKII+KAKTF QVK 
Sbjct: 655  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIMKAKTFDQVKK 714

Query: 1232 VALALEAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRR 1411
            VALALEAESGGVLV VD++SKG+AI+VYRG+DY RP T+RPKNLLTKR+ALARSIELQRR
Sbjct: 715  VALALEAESGGVLVSVDRISKGYAIIVYRGKDYQRPSTIRPKNLLTKRRALARSIELQRR 774

Query: 1412 EALNRHISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCSXXXXXXXXXXXXAYL 1591
            EAL +H+S LQ KVD++RSE+ QM   ++QGDEE Y +LDS+Y              AYL
Sbjct: 775  EALVKHVSALQAKVDKIRSEIDQMHSMEEQGDEEFYDRLDSSY-PTDDDDTEEEGDEAYL 833

Query: 1592 NTLNSDVAVDE 1624
             T  S+   +E
Sbjct: 834  ETYESENDAEE 844


>ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
            gi|223543652|gb|EEF45180.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 773

 Score =  674 bits (1740), Expect = 0.0
 Identities = 344/517 (66%), Positives = 420/517 (81%), Gaps = 4/517 (0%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGL--NSFKRDTYSLAQASEFSRG 175
            TGGLVIWRSGTS+SLYRGV+YE P  V++  Q  +R  L  NS    T  +   S+ +  
Sbjct: 172  TGGLVIWRSGTSVSLYRGVSYEDPS-VQLNKQILKRNELSNNSLSTATGIIRSPSKSAAS 230

Query: 176  N--HMEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDADL 349
            +  +M   +   +AE +++K++++  E  Y+ E+DKLL+ LGPRYTDW G  P PVDAD+
Sbjct: 231  SDLNMPHLNSDSTAEGEEKKEIEMETEVKYEDEVDKLLEGLGPRYTDWAGLDPLPVDADM 290

Query: 350  LPGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIVKL 529
            LPG++PGY+PPFRILPYGV+ +LG KE T+LRRL+R+LPPHFALGRSR+ QGLA A++KL
Sbjct: 291  LPGIIPGYQPPFRILPYGVRSSLGQKEATSLRRLARILPPHFALGRSRQLQGLADAMIKL 350

Query: 530  WEKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITEAL 709
            WEKSSIAKISLKRGVQLT+SERMAE+IKKLTGG +LSRNKD++V YRGKDFLSPE+TEAL
Sbjct: 351  WEKSSIAKISLKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVTEAL 410

Query: 710  LERERLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGNDIDDDHA 889
            +ERERLA++LQD+EEQARLRAS+       ++ +PG AGTL ETL+A ARWG  +D +H 
Sbjct: 411  VERERLAQSLQDKEEQARLRASALFVQTAETLEQPGTAGTLEETLDADARWGKCLDQNHR 470

Query: 890  NKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPITEEE 1069
             K++R AE+ RHAN+VRKLE  L  AE+K+ KA R L+KVE  LKPAE   DPE IT+EE
Sbjct: 471  EKIMREAEIARHANLVRKLESKLAFAEKKLMKAERALSKVEVFLKPAERQADPESITDEE 530

Query: 1070 RFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVALALE 1249
            RFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVKII+KAK   QVK +ALALE
Sbjct: 531  RFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKNIEQVKKIALALE 590

Query: 1250 AESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREALNRH 1429
            AESGG+LV VD+VSKG+AI+V+RG+DY RP  LRP NLLTKRKALARSIE+QR EAL +H
Sbjct: 591  AESGGILVSVDRVSKGYAIIVFRGKDYQRPSKLRPGNLLTKRKALARSIEIQRSEALLKH 650

Query: 1430 ISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAY 1540
            IS LQKKVD++R E+AQM+  KDQGDEELY +LD+ Y
Sbjct: 651  ISALQKKVDKIRYEIAQMEKVKDQGDEELYDRLDATY 687


>gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  674 bits (1738), Expect = 0.0
 Identities = 353/542 (65%), Positives = 426/542 (78%), Gaps = 6/542 (1%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRDTYS------LAQASE 163
            TGGLVIWRSGTS+SLYRGV+YE+P  VK+  +  ++  ++S    T +       A+ + 
Sbjct: 308  TGGLVIWRSGTSLSLYRGVSYEVPS-VKLNKRIYKKNDISSAPLPTVADKSVGDFAELAS 366

Query: 164  FSRGNHMEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDA 343
            +S     ++  E  S E   ++D +   E  Y+ E+DKLLD LGPR+ DWPG  P PVDA
Sbjct: 367  YSNVKTPQEKSENTSQE---KEDTEQLAEVKYEDEVDKLLDSLGPRFKDWPGCDPLPVDA 423

Query: 344  DLLPGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIV 523
            D+LPG+VPGY+PPFR+LPYGV+ TLGLKE T+LRRL+RVLPPHFALGRSR+ QGLA+A+ 
Sbjct: 424  DMLPGIVPGYQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPHFALGRSRQLQGLAVAMA 483

Query: 524  KLWEKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITE 703
            KLWEKS IAKI+LKRGVQLT+SERMAE+IK+LTGG +LSRNKD++V YRGK+FLSP++TE
Sbjct: 484  KLWEKSLIAKIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKDFLVFYRGKNFLSPDVTE 543

Query: 704  ALLERERLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGNDIDDD 883
            ALLERERLAK+LQDEEEQARLRAS+    N       G AGTLGETL+A A+WG  +D +
Sbjct: 544  ALLERERLAKSLQDEEEQARLRASAMFIPNVEVAQHFGTAGTLGETLDADAKWGKRLDKE 603

Query: 884  HANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPITE 1063
               K++R A++ RHA++VRKLER L  AE+K+ +A + L+KVEESLKP++   DPE IT+
Sbjct: 604  ---KVMREADILRHAHLVRKLERKLSFAERKLMRAEQALSKVEESLKPSKQQADPESITD 660

Query: 1064 EERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVALA 1243
            EERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVKI++ AKTF QVKN+ALA
Sbjct: 661  EERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKTFEQVKNIALA 720

Query: 1244 LEAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREALN 1423
            LEAESGGVLV VDKVSK FAI+VYRG+DYHRP TLRPKNLLTKRKALARSIELQR+EAL 
Sbjct: 721  LEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIELQRQEALL 780

Query: 1424 RHISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCSXXXXXXXXXXXXAYLNTLN 1603
            +HIS +Q KVD LRSE+ QMD  KDQGDE LY KLDS+Y              AYL T N
Sbjct: 781  KHISAVQSKVDTLRSEIEQMDSVKDQGDEALYNKLDSSY---PTDDEDSEEVDAYLETYN 837

Query: 1604 SD 1609
             +
Sbjct: 838  RE 839


>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
            gi|222864769|gb|EEF01900.1| hypothetical protein
            POPTR_0010s08770g [Populus trichocarpa]
          Length = 894

 Score =  672 bits (1733), Expect = 0.0
 Identities = 348/545 (63%), Positives = 424/545 (77%), Gaps = 5/545 (0%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQ-PVKIRYQSPERAGLNSFKRDT-YSLAQASEFSRG 175
            TGGLVIWRSG ++SLYRGV+YE P    K R    +    NS    T  ++   S+ S  
Sbjct: 279  TGGLVIWRSGATVSLYRGVSYEDPALKWKKRIFKKKETSSNSLPAATSITIGSQSKNSPD 338

Query: 176  N--HMEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDADL 349
            N  H       ++ E   +K+ +   +  Y+ E+DKLLD LGPRYTDWPG  P PVDAD+
Sbjct: 339  NEIHAPRPKTEINVEAANQKETKTQTDVKYEDEVDKLLDGLGPRYTDWPGLDPLPVDADM 398

Query: 350  LPGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIVKL 529
            LPGV+PGY+PPFRILPYGV+ TLG ++ T+LRRL+RVLPPHFA+GRSR+ QGLA+A++KL
Sbjct: 399  LPGVIPGYQPPFRILPYGVRPTLGRQDSTSLRRLARVLPPHFAVGRSRQLQGLAVAMIKL 458

Query: 530  WEKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITEAL 709
            WEKSSI K++LKRGVQLT+SERMAE+IKKLTGG +LSRNKD++V YRGKDFLSPE++EAL
Sbjct: 459  WEKSSIVKVALKRGVQLTTSERMAEDIKKLTGGLLLSRNKDFLVFYRGKDFLSPEVSEAL 518

Query: 710  LERERLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGNDIDDDHA 889
            LERERLAK+LQDEEEQARLRAS+ V  +D  + E GIAG+L ETL+A A+WG  +DD H 
Sbjct: 519  LERERLAKSLQDEEEQARLRASALVIPSDEIMEESGIAGSLEETLDADAKWGKRLDDCHK 578

Query: 890  NKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPITEEE 1069
             K++R AE+ RHA+IVR+LE+ L  A++K+ +A R L KVE  LKP+E   DPE IT+EE
Sbjct: 579  EKIIREAEIVRHASIVRRLEKKLAFAQRKLRRAERTLNKVEGFLKPSERQADPESITDEE 638

Query: 1070 RFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVALALE 1249
            RFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVKII+KAK+F QVK +ALALE
Sbjct: 639  RFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKSFEQVKKIALALE 698

Query: 1250 AESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREALNRH 1429
            AESGGVLV VDK+SKG+AI+VYRG+DY RP  LRPKNLLTKRKALARSIE+QR EAL  H
Sbjct: 699  AESGGVLVSVDKISKGYAIIVYRGKDYQRPSMLRPKNLLTKRKALARSIEIQRSEALQNH 758

Query: 1430 ISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCS-XXXXXXXXXXXXAYLNTLNS 1606
            +S L+ KV+++RSE+ QM   KD+GDEELY +LDSAY +             AYL T NS
Sbjct: 759  VSALEIKVEKIRSEIEQMGFVKDKGDEELYDRLDSAYLTDDDADDSEDEGDEAYLETYNS 818

Query: 1607 DVAVD 1621
            +  VD
Sbjct: 819  ENDVD 823


>ref|XP_006663567.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Oryza brachyantha]
          Length = 702

 Score =  668 bits (1723), Expect = 0.0
 Identities = 340/515 (66%), Positives = 422/515 (81%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRDTYSLAQASEFSRGNH 181
            TGGLVIWRSGTS+SLYRGV Y+IP+P K   ++ +  G+ S  +++   +      + N+
Sbjct: 55   TGGLVIWRSGTSVSLYRGVAYDIPEPTKRTSKNMQTLGMMSSIKESPGPSLLPN-EKVNN 113

Query: 182  MEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDADLLPGV 361
            M+D +  + +  +K + ++  PE  Y+ EI+KLLD+LGPRYTDWP   P PVDADLLP  
Sbjct: 114  MQDTNGALLSNTEKDRLVEPVPEIKYEDEINKLLDELGPRYTDWPRGDPSPVDADLLPAT 173

Query: 362  VPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIVKLWEKS 541
            VPGY+PPFR+LPYGV+ +LG ++ T LRRL+R LPPHFALGRSR+ QGLA A+VKLWEKS
Sbjct: 174  VPGYKPPFRVLPYGVRPSLGRRDTTNLRRLARGLPPHFALGRSRQLQGLAAAMVKLWEKS 233

Query: 542  SIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITEALLERE 721
            SIAKI+LKRGVQLT+SERMAE+IKKLTGG +LSRN D+IV YRGKDFLS E+ EALLERE
Sbjct: 234  SIAKIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNDFIVFYRGKDFLSSELAEALLERE 293

Query: 722  RLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGNDIDDDHANKMV 901
            RLAK+LQDEE QARL A+SS A +  + +EP +AGTLGETLEA++++GN +D++  +KM 
Sbjct: 294  RLAKSLQDEE-QARLNAASSFASSTEAPLEPTVAGTLGETLEANSKYGNKLDENFEDKMT 352

Query: 902  RAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPITEEERFMF 1081
            R  E  RHA++VRKLE  L +AE+K+ KA RVL KVE +LKP E  K  E IT+EERFMF
Sbjct: 353  RTVEAARHADLVRKLEWKLSLAEKKIAKAERVLGKVETALKPTEGSKLAETITDEERFMF 412

Query: 1082 RKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVALALEAESG 1261
            RKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKI++KAK+F +VK +AL+LEAESG
Sbjct: 413  RKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGEVKKIALSLEAESG 472

Query: 1262 GVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREALNRHISNL 1441
            G+LV VDKVSKG+AIVV+RG+DY RP  LRP+NLL+KRKALARSIE+QRREAL+RHI++L
Sbjct: 473  GILVSVDKVSKGYAIVVFRGKDYRRPSKLRPRNLLSKRKALARSIEIQRREALSRHIASL 532

Query: 1442 QKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCS 1546
             ++V QL+SEL QM+  K++GDEELYAKLDSAY S
Sbjct: 533  NRRVKQLKSELIQMEGVKEEGDEELYAKLDSAYSS 567


>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 883

 Score =  665 bits (1716), Expect = 0.0
 Identities = 334/515 (64%), Positives = 412/515 (80%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRDTYSLAQASEFSRGNH 181
            TGGLVIWRSGTS++LYRGV+YE P   +++ +   R  +   K       ++++ SR N 
Sbjct: 319  TGGLVIWRSGTSVALYRGVSYETPSE-RMKKRIMRRDEIRQ-KNSPIVDGESNQNSR-ND 375

Query: 182  MEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDADLLPGV 361
            ++   E      ++ K +    E +Y+ E+DKLLD LGPRYTDWPG+GP PVDADLLPG+
Sbjct: 376  VDSLREDSVDTSEENKSIDRQSEVNYEDEVDKLLDGLGPRYTDWPGSGPLPVDADLLPGI 435

Query: 362  VPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIVKLWEKS 541
            VPGY+PPFRILPYGV+ TL  +E TALRRL+RVLPPHFALGRSR+HQGLA  +VKLW++S
Sbjct: 436  VPGYQPPFRILPYGVRSTLAAREATALRRLARVLPPHFALGRSRQHQGLASVMVKLWQRS 495

Query: 542  SIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITEALLERE 721
            SIAKI++KRGVQLT+SERMAE+IKKLTGG +LSRNKD++V YRGKDFLSPE+ EALLE+E
Sbjct: 496  SIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVAEALLEKE 555

Query: 722  RLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGNDIDDDHANKMV 901
            RLAKTLQDEEE+ARLRAS ++     ++     AGTLGETL+A ARWG  +DD H   ++
Sbjct: 556  RLAKTLQDEEEKARLRASLNLTAGVTTINSSRTAGTLGETLDADARWGKRLDDKHKENVM 615

Query: 902  RAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPITEEERFMF 1081
            R AE+ RH ++VRKLE+ L  AE+K+ KA RVL+KVEE+L P +   +P+ +T+EERFMF
Sbjct: 616  REAELLRHGDLVRKLEKKLAFAEKKLMKAERVLSKVEETLNPLDRHAEPDSLTDEERFMF 675

Query: 1082 RKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVALALEAESG 1261
            RKLGLRMKAFLLLGRRG+FDGT+ENMHLHWKYRELVKI++KAK F QV  +ALALEAESG
Sbjct: 676  RKLGLRMKAFLLLGRRGIFDGTVENMHLHWKYRELVKIMVKAKNFEQVSKIALALEAESG 735

Query: 1262 GVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREALNRHISNL 1441
            G+LV VDKVSKG+AI+V+RG+DY RPPTLRPKNLLTKRKALARSIELQRREAL  HIS +
Sbjct: 736  GILVSVDKVSKGYAIIVFRGKDYSRPPTLRPKNLLTKRKALARSIELQRREALLEHISAV 795

Query: 1442 QKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCS 1546
            Q +V QL +E+ Q+   KD  D+ELY KL+SAY S
Sbjct: 796  QTRVGQLTAEIEQLASLKDSADDELYDKLNSAYSS 830


>ref|XP_006838849.1| hypothetical protein AMTR_s00002p00265220 [Amborella trichopoda]
            gi|548841355|gb|ERN01418.1| hypothetical protein
            AMTR_s00002p00265220 [Amborella trichopoda]
          Length = 882

 Score =  665 bits (1715), Expect = 0.0
 Identities = 337/521 (64%), Positives = 412/521 (79%), Gaps = 6/521 (1%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIP--QPVKIRYQSPERAGLNSFKRDTYSLAQASEFSRG 175
            TGGLVIWRSG+SI LYRG+ Y++   +P K + Q       N    D  +    SE    
Sbjct: 289  TGGLVIWRSGSSIVLYRGINYDVSDEKPAKKQTQVNRNFNRNGSAIDEVN-GSFSESVSS 347

Query: 176  NHMEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDADLLP 355
              ++ F E     ++ + + + P + +Y+KE+D+LL+ LGPRY DW G  P PVDADLLP
Sbjct: 348  RDLQRFPEEKGVNIENKTETEPPNKVNYEKEVDQLLEGLGPRYNDWAGCDPLPVDADLLP 407

Query: 356  GVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIVKLWE 535
            GVVPGY+PPFR+LPYG++ +LG  E T LRRL+RVLPPHFALGRSR+HQGLA+A+VK+WE
Sbjct: 408  GVVPGYKPPFRLLPYGMRFSLGRTEMTTLRRLARVLPPHFALGRSRQHQGLAVAMVKVWE 467

Query: 536  KSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITEALLE 715
            KSSI KI+LKRGVQ T  ERMAE+IK LTGG +LSRNKD++V YRGKDFLSPE+TEALLE
Sbjct: 468  KSSIVKIALKRGVQNTCGERMAEQIKSLTGGTLLSRNKDFMVFYRGKDFLSPEVTEALLE 527

Query: 716  RERLAKTLQDEEEQARLRASSSVALNDMSVI----EPGIAGTLGETLEAHARWGNDIDDD 883
            RERLAK LQDEEE ARL A++S+ ++D+S      EP  +GTL ETLEA ARWG ++D +
Sbjct: 528  RERLAKALQDEEENARLYATASI-ISDVSTTTAKEEPRFSGTLSETLEASARWGKNLDSE 586

Query: 884  HANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPITE 1063
               KM++AAE TRHA +VRKLER L +A+QK  +A + LAKVEE LKP +  +D E IT+
Sbjct: 587  EKEKMIKAAEATRHAGLVRKLERKLDLAQQKAMRAEKALAKVEEFLKPTDQSRDQESITD 646

Query: 1064 EERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVALA 1243
            EERFMFRKLGLRMKA+LLLG+RGVFDGT+ENMHLHWKYREL+KII+KAK F  VKN+AL+
Sbjct: 647  EERFMFRKLGLRMKAYLLLGKRGVFDGTVENMHLHWKYRELIKIILKAKNFGHVKNIALS 706

Query: 1244 LEAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREALN 1423
            LEAESGG+LV VDK+SKG+AI+VYRG+ Y RP  LRP+NLLTKRKALARSIELQRREALN
Sbjct: 707  LEAESGGILVSVDKISKGYAIIVYRGKGYKRPRLLRPQNLLTKRKALARSIELQRREALN 766

Query: 1424 RHISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCS 1546
             HISNLQK+V  L+SELAQM+  K++GDE+LYAKLDS YCS
Sbjct: 767  NHISNLQKRVQTLKSELAQMESIKEKGDEDLYAKLDSVYCS 807


>ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 838

 Score =  662 bits (1707), Expect = 0.0
 Identities = 339/519 (65%), Positives = 414/519 (79%), Gaps = 6/519 (1%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIP--QPVKIRYQSPERAGLNSFKRDTYSLAQASEFSRG 175
            TGGLVIWRSG S+SLYRGV+Y+ P  Q  K  Y+  E +     K       + SE +  
Sbjct: 283  TGGLVIWRSGNSVSLYRGVSYKDPSIQHNKQLYRKSENSSKFLSKPSNNFAVKPSELTSN 342

Query: 176  NHMEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDADLLP 355
            +      E + +  D+++   LP  + Y+ E+DKLLD LGPRYTDWPG  P PVDAD+LP
Sbjct: 343  SETNTSLEKLESTNDQKEKDNLPKLT-YEDEVDKLLDGLGPRYTDWPGCEPLPVDADMLP 401

Query: 356  GVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIVKLWE 535
              VPGY+PPFR+LP+GV+ TLGLKE T+LRR++R LPPHFALGR+R+ QGLA A++KLWE
Sbjct: 402  PTVPGYQPPFRVLPFGVRPTLGLKEATSLRRIARGLPPHFALGRNRQLQGLAAAMIKLWE 461

Query: 536  KSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITEALLE 715
            KSSIAK++LKRGVQLT+SERMAEEIKKLTGG ILSRNKD++V +RGK FLS ++TEALLE
Sbjct: 462  KSSIAKVALKRGVQLTTSERMAEEIKKLTGGTILSRNKDFLVFFRGKSFLSSDVTEALLE 521

Query: 716  RERLAKTLQDEEEQARLRASS----SVALNDMSVIEPGIAGTLGETLEAHARWGNDIDDD 883
            RER+AK +QDEEEQARLRASS    ++  +++SV E   AGTLGETL+A A+WG  +D+ 
Sbjct: 522  RERMAKAMQDEEEQARLRASSLLIPAINTSELSVAE---AGTLGETLDADAKWGKTLDER 578

Query: 884  HANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPITE 1063
            H  K++R  E  RHAN+VRKLE+ L +AE+K+ +A + L KVEESLKP+E+  DPE IT+
Sbjct: 579  HKQKVMREVEQLRHANLVRKLEQKLSLAERKIMRAEKALMKVEESLKPSENTADPESITD 638

Query: 1064 EERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVALA 1243
            EERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYREL+KII+KAK F QVK +ALA
Sbjct: 639  EERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELIKIIVKAKNFEQVKKIALA 698

Query: 1244 LEAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREALN 1423
            LEAESGGVLV VDKVSKG++I+VYRG+DY RP TLRPKNLLTKRKALARSIELQR EAL+
Sbjct: 699  LEAESGGVLVSVDKVSKGYSILVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRHEALS 758

Query: 1424 RHISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAY 1540
             HIS LQ  +++LRSE+ QM+  K++GDE LY KLDSAY
Sbjct: 759  THISTLQSNMEKLRSEIEQMEKVKEEGDEALYNKLDSAY 797


>gb|ABA94534.1| CRS1/YhbY domain containing protein, expressed [Oryza sativa Japonica
            Group]
          Length = 886

 Score =  661 bits (1705), Expect = 0.0
 Identities = 340/541 (62%), Positives = 426/541 (78%), Gaps = 2/541 (0%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRDT--YSLAQASEFSRG 175
            TGGLVIWRSGTS+SLYRGV Y+IP+P K   ++ +  G+ S  ++   +SL    +    
Sbjct: 243  TGGLVIWRSGTSVSLYRGVAYDIPEPTKGTSKNTQTLGMKSSIKEPPGHSLLPNEKV--- 299

Query: 176  NHMEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDADLLP 355
            N M+D +  + +  +K   ++  PE  Y+ EIDKLLD+LGPRY DWP   P PVDADLLP
Sbjct: 300  NEMQDNNGALVSNAEKDTLVEPVPEIKYEDEIDKLLDELGPRYDDWPRPDPSPVDADLLP 359

Query: 356  GVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIVKLWE 535
              VPGY+PPFR+LPYGV+ +L  ++ T LRRL+R LPPHFALGRSR+ QGLA A+VKLWE
Sbjct: 360  ATVPGYKPPFRVLPYGVRPSLSRRDTTNLRRLARGLPPHFALGRSRQLQGLAAAMVKLWE 419

Query: 536  KSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITEALLE 715
            KSSIAKI+LKRGVQLT+SERMAE+IKKLTGG +LSRN D++V YRGKDFLSPE+ E LLE
Sbjct: 420  KSSIAKIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNDFMVFYRGKDFLSPELAEKLLE 479

Query: 716  RERLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGNDIDDDHANK 895
            RER AK+LQDEE QARL A+SS +    + +EP +AGTLGETLEA++++GN +D+++ NK
Sbjct: 480  RERWAKSLQDEE-QARLNAASSFSSRTEAPVEPTVAGTLGETLEANSKYGNKLDENYENK 538

Query: 896  MVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPITEEERF 1075
            M R  E  RHA++VRKLE  L +A++K++KA RVL KVE +LKP E ++ PE IT+EERF
Sbjct: 539  MTRTVEAARHADLVRKLEWKLQLAQKKIEKAERVLGKVETALKPTEGIQPPETITDEERF 598

Query: 1076 MFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVALALEAE 1255
            MFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKI++KAK+F  VK +AL+LEAE
Sbjct: 599  MFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAE 658

Query: 1256 SGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREALNRHIS 1435
            SGG+LV VDKVSKG+AIVV+RG+DY RP  LRP+NLL+KRKALARSIE+QRREAL+ HI+
Sbjct: 659  SGGILVSVDKVSKGYAIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREALSHHIA 718

Query: 1436 NLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCSXXXXXXXXXXXXAYLNTLNSDVA 1615
             L ++V +L++EL QM+  K++GD ELYAKLDSAY S            AYL + ++ VA
Sbjct: 719  TLNRRVKKLKAELLQMEGVKEEGDVELYAKLDSAY-SSDEEDVEDEDDEAYLRSFDNSVA 777

Query: 1616 V 1618
            V
Sbjct: 778  V 778


>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 883

 Score =  659 bits (1700), Expect = 0.0
 Identities = 335/521 (64%), Positives = 406/521 (77%), Gaps = 6/521 (1%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRDTYSLAQA------SE 163
            TGGLVIWRSGTS++LYRGV+YE P          ER      +RD      +      S 
Sbjct: 319  TGGLVIWRSGTSVALYRGVSYETPS---------ERMKKRIMRRDEIRHKNSPIVDGESN 369

Query: 164  FSRGNHMEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDA 343
             +  N ++   E      ++ K++    E +Y+ E+DKLLD LGPRYTDWPG+GP PVDA
Sbjct: 370  QNPRNDVDSLREDSVDTSEENKNIDRQSEVNYEDEVDKLLDGLGPRYTDWPGSGPLPVDA 429

Query: 344  DLLPGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIV 523
            DLLPG+VPGY+PPFRILPYGV+ TL  +E TALRRL+RVLPPHFALGRSR+HQGLA  +V
Sbjct: 430  DLLPGIVPGYQPPFRILPYGVRSTLAAREATALRRLARVLPPHFALGRSRQHQGLASVMV 489

Query: 524  KLWEKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITE 703
            KLW++SSIAKI++KRGVQLT+SERMAE+IKKLTGG +LSRNKD++V YRGKDFLSPE+ E
Sbjct: 490  KLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVAE 549

Query: 704  ALLERERLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGNDIDDD 883
            ALLE+ERLAKTLQDEEE+ARLRAS  +     ++     AGTLGETL+A ARWG  +DD 
Sbjct: 550  ALLEKERLAKTLQDEEEKARLRASLLLTAGVTTINSSRTAGTLGETLDADARWGKRLDDK 609

Query: 884  HANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPITE 1063
                ++R AE+ RH ++VRKLE+ L  AE+K+ KA RVL+KVEE+L P +   +P+ +T+
Sbjct: 610  DKENVMREAELLRHGDLVRKLEKKLAFAERKLMKAERVLSKVEETLNPLDRRAEPDSLTD 669

Query: 1064 EERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVALA 1243
            EERFMFRKLGLRMKAFLLLGRRG+FDGT+ENMHLHWKYRELVKI++KAK F QV  +ALA
Sbjct: 670  EERFMFRKLGLRMKAFLLLGRRGIFDGTVENMHLHWKYRELVKIMVKAKNFEQVSKIALA 729

Query: 1244 LEAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREALN 1423
            LEAESGGVLV VDKVSKG+AI+V+RG+DY RPPTLRPKNLLTKRKALARSIELQRREAL 
Sbjct: 730  LEAESGGVLVSVDKVSKGYAIIVFRGKDYSRPPTLRPKNLLTKRKALARSIELQRREALL 789

Query: 1424 RHISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCS 1546
             HIS +Q +V QL +E+ Q+   KD  D+ELY KL+SAY S
Sbjct: 790  EHISAVQTRVGQLTAEIEQLASLKDSTDDELYDKLNSAYSS 830


>dbj|BAJ90192.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  659 bits (1700), Expect = 0.0
 Identities = 333/515 (64%), Positives = 411/515 (79%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRDTYSLAQASEFSRGNH 181
            TGGLVIWRSGTS+SLYRGV Y++P   K   ++ +  G+ S  +    +  +    + N 
Sbjct: 252  TGGLVIWRSGTSVSLYRGVAYDVPDTTKGTNRTWQDVGMKSSIKGP-PIPSSIPNEKVNS 310

Query: 182  MEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDADLLPGV 361
            M+  + G+ +  +K + ++  PE  Y++EI +LLD+LGPRY+DWPG+ P PVDADLLP  
Sbjct: 311  MQGSNGGLVSNTEKEEAIETVPEIKYEEEIGRLLDELGPRYSDWPGSNPLPVDADLLPAT 370

Query: 362  VPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIVKLWEKS 541
            +PGY+PPFR+LPYGV+R+L  K+ T LRRL+R LPPHFALGRSR+ QGLA A+VKLWE+S
Sbjct: 371  IPGYKPPFRVLPYGVRRSLSRKDTTNLRRLARGLPPHFALGRSRQLQGLAAAMVKLWERS 430

Query: 542  SIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITEALLERE 721
            SIAK++LKRGVQLT+SERMAE+IKKLTGG +LSRN D++V YRGKDFLS E+ EALLERE
Sbjct: 431  SIAKVALKRGVQLTTSERMAEDIKKLTGGVMLSRNNDFVVFYRGKDFLSTELAEALLERE 490

Query: 722  RLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGNDIDDDHANKMV 901
            R  K+LQDEE QARL A  S   +  + IE  +AGTLGETLEA++++GN++ D+H +KM 
Sbjct: 491  RSMKSLQDEE-QARLNAKLSFTSSTEAFIESTVAGTLGETLEANSKYGNELVDNHVDKMT 549

Query: 902  RAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPITEEERFMF 1081
            R  E  +HA++VRKLE  L +AE+++ KA RVL KVE +LKP E  K PE IT+EERFMF
Sbjct: 550  RTVEAAKHADLVRKLEWKLALAEKRIAKAERVLGKVETALKPTEDTKPPETITDEERFMF 609

Query: 1082 RKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVALALEAESG 1261
            RKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKI++KAK+F+ VK  AL+LE ESG
Sbjct: 610  RKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRTALSLEVESG 669

Query: 1262 GVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREALNRHISNL 1441
            GVLV VDKVSKG+AIVV+RG+DY RP  LRP+NLL+KRKALARSIELQR EAL RHI  L
Sbjct: 670  GVLVSVDKVSKGYAIVVFRGKDYKRPSMLRPRNLLSKRKALARSIELQRMEALGRHIEKL 729

Query: 1442 QKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCS 1546
             ++V+QLRSEL QM+  KDQGDEELYAKLDSAY S
Sbjct: 730  NRRVNQLRSELVQMEDVKDQGDEELYAKLDSAYSS 764


>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 835

 Score =  657 bits (1695), Expect = 0.0
 Identities = 349/548 (63%), Positives = 419/548 (76%), Gaps = 12/548 (2%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIP--QPVKIRYQSPERAGLNSFKRDTYSLAQASEFSRG 175
            TGGLVIWRSG S+SLYRGV+YE+P  Q  K  Y+  E    NS K     L   S  S G
Sbjct: 278  TGGLVIWRSGNSVSLYRGVSYEVPSVQQNKKIYRKSE----NSSKL----LPTPSYNSVG 329

Query: 176  NHME-DFHEGVSAEVDK------RKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPP 334
            N  +   + G SA + K       K+    P+ +Y+ E+DKLLD LGPRYTDWPG  P P
Sbjct: 330  NPSDIASNSGTSAPLAKLESTNDEKERDYLPKVNYEHEVDKLLDGLGPRYTDWPGCDPLP 389

Query: 335  VDADLLPGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLAL 514
            VDAD+LP  VPGY+PPFR+LP+GV+ TLGL+E TALRR++R LPPHFALGR+R+ QGLA+
Sbjct: 390  VDADMLPVTVPGYQPPFRVLPFGVRATLGLREATALRRIARTLPPHFALGRNRQLQGLAV 449

Query: 515  AIVKLWEKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPE 694
            A++KLWE SSIAK++LKRGVQLT+SERMAEEIKKLTGG +LSRNKD++V +RGK+FLS +
Sbjct: 450  AMIKLWEISSIAKVALKRGVQLTTSERMAEEIKKLTGGILLSRNKDFLVFFRGKNFLSAD 509

Query: 695  ITEALLERERLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGNDI 874
            +T+ALLERER+AK +QDEEEQARLRASS +   + +      AGTLGETL+A A+WG  +
Sbjct: 510  VTQALLERERMAKVMQDEEEQARLRASSLLIPTNNTSELSAEAGTLGETLDADAKWGKTL 569

Query: 875  DDDHANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEP 1054
            D+ H  K++R  E  RHAN+V+KLE+ L  AE+K+ +A + L KVE  LKP+E+  DPE 
Sbjct: 570  DERHKQKIMREVEQLRHANLVKKLEQKLSFAERKLRRAEKALMKVESFLKPSEYKADPES 629

Query: 1055 ITEEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNV 1234
            IT+EERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKII+KAKTF QVK +
Sbjct: 630  ITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIVKAKTFEQVKKI 689

Query: 1235 ALALEAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRRE 1414
            ALALEAESGGVLV VDKVSKG++++VYRG+DY RP TLRPKNLLTKRKALARSIELQR E
Sbjct: 690  ALALEAESGGVLVSVDKVSKGYSVIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRHE 749

Query: 1415 ALNRHISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCS---XXXXXXXXXXXXA 1585
            AL  HIS LQ KV ++RSE+ QM+  KD+GDE LY KLDSAY S               A
Sbjct: 750  ALMNHISTLQSKVGRIRSEIEQMEKVKDKGDEALYDKLDSAYPSDDENSEVEDGEQGDEA 809

Query: 1586 YLNTLNSD 1609
            YL T NS+
Sbjct: 810  YLKTYNSE 817


>ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
            truncatula] gi|355479830|gb|AES61033.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Medicago
            truncatula]
          Length = 838

 Score =  655 bits (1689), Expect = 0.0
 Identities = 340/518 (65%), Positives = 415/518 (80%), Gaps = 5/518 (0%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIP--QPVKIRYQSPERA-GLNSFKRDTYSLAQASEFSR 172
            TGGLVIWRSG S+SLYRGV+Y+ P  Q  K  Y+  E++    S   D + + + SEF+ 
Sbjct: 278  TGGLVIWRSGNSVSLYRGVSYKDPSIQQNKQLYRKNEKSLKFLSAPSDDFEV-EPSEFTT 336

Query: 173  GNHMEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDADLL 352
             +  +   E + +  D+++ + LP  S Y+ E+DKLLD LGPRYTDWPG  P PVDAD+L
Sbjct: 337  DSETKTSLEKLESTNDQKEKVNLPKIS-YEDEVDKLLDGLGPRYTDWPGCEPLPVDADML 395

Query: 353  PGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIVKLW 532
            P  VPGY+PPFR+LP+GV+ TLG KE T+LRR++R LPPHFALGR+R+ QGLA A++KLW
Sbjct: 396  PPTVPGYQPPFRVLPFGVRPTLGFKEATSLRRIARGLPPHFALGRNRQLQGLAAAMIKLW 455

Query: 533  EKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITEALL 712
            EKSSIAK++LKRGVQLT+SERMAEEIKKLTGG ILSRNKD++V YRGK+FLSP++T+ALL
Sbjct: 456  EKSSIAKVALKRGVQLTTSERMAEEIKKLTGGIILSRNKDFLVFYRGKNFLSPDVTQALL 515

Query: 713  ERERLAKTLQDEEEQARLRASSSV--ALNDMSVIEPGIAGTLGETLEAHARWGNDIDDDH 886
            ERE++AK++QDEEEQARLRASS +  A+N   +     AGTLGETL+A A+WG  +D+ H
Sbjct: 516  EREKMAKSMQDEEEQARLRASSLILPAINTSELSAE--AGTLGETLDADAKWGKTLDECH 573

Query: 887  ANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPITEE 1066
              K++R  E  RHANIVRKLE  L +AE+K+ +A R L KVE SLKP+E   DPE IT+E
Sbjct: 574  EQKVMREVEQLRHANIVRKLEEKLSLAERKIRRAERALMKVEVSLKPSETRADPESITDE 633

Query: 1067 ERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVALAL 1246
            ERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKII+KA  F  VK +ALAL
Sbjct: 634  ERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIVKANNFEHVKKIALAL 693

Query: 1247 EAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREALNR 1426
            EAESGGVLV VDKVSKG++I+VYRG+DY RP  LRPKNLLTKRKALARSIELQR EAL+ 
Sbjct: 694  EAESGGVLVSVDKVSKGYSILVYRGKDYQRPSMLRPKNLLTKRKALARSIELQRHEALSS 753

Query: 1427 HISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAY 1540
            HIS LQ KV++LRSE+ Q++  K++GDE LY +LDSAY
Sbjct: 754  HISTLQSKVEKLRSEIEQIEKVKEEGDEALYNRLDSAY 791


>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 933

 Score =  653 bits (1685), Expect = 0.0
 Identities = 336/535 (62%), Positives = 412/535 (77%), Gaps = 20/535 (3%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQ-------------PVKIRYQSPERAGLNSFKRDTY 142
            TGGLVIWRSGT++SLYRGV+YE+P              P     Q+ ++           
Sbjct: 318  TGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSGN 377

Query: 143  SLAQASEFSRGNHME-DFHEGVSAE------VDKRKDLQLPPESHYDKEIDKLLDDLGPR 301
            SL+ A++ +  +    D +  V A         + ++     E  Y+ E++KLLD LGPR
Sbjct: 378  SLSAAADKTAQDPSNFDSYNNVHATQVNLETASEEQETDFVREVKYEDEVEKLLDGLGPR 437

Query: 302  YTDWPGNGPPPVDADLLPGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFAL 481
            YTDWPG  P PVDAD+LPG+VPGY+PPFR+LPYGV+ TL  KE T L+RL+RVLPPHFAL
Sbjct: 438  YTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFAL 497

Query: 482  GRSRRHQGLALAIVKLWEKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIV 661
            GRSR+ QGLA+A++KLWEKSSIAKI+LKRGVQLT+SERM E+IKKLTGG +LSRNKD++V
Sbjct: 498  GRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLV 557

Query: 662  IYRGKDFLSPEITEALLERERLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGET 841
             YRGK+FLSP++TEAL ERERLAK+LQDEEEQARLRAS+ V  +  ++ + G AGTL ET
Sbjct: 558  FYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKET 617

Query: 842  LEAHARWGNDIDDDHANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESL 1021
            L+A++RWG  +DD H   +VR AE+ RHA +V+KLE+ L  AE+K+ +A R L+KVEESL
Sbjct: 618  LDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESL 677

Query: 1022 KPAEHVKDPEPITEEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIII 1201
            KPAE   DPE IT+EERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVKII+
Sbjct: 678  KPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIV 737

Query: 1202 KAKTFSQVKNVALALEAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKA 1381
            K KTF Q K +ALALEAESGGVLV VDK+SKG+A+VVYRG+DY RP TLRPKNLLTKRKA
Sbjct: 738  KVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKA 797

Query: 1382 LARSIELQRREALNRHISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCS 1546
            LARSIELQR+EAL +H++ L+    +LRSE+ QM+  K  GDE+LY KLDSAY +
Sbjct: 798  LARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYAT 852


>ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521988|gb|ESR33355.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 934

 Score =  652 bits (1681), Expect = 0.0
 Identities = 338/541 (62%), Positives = 414/541 (76%), Gaps = 26/541 (4%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRDTYSLAQASEFSRGNH 181
            TGGLVIWRSGT++SLYRGV+YE+P  V++  +  +R  L +      S++QA++      
Sbjct: 319  TGGLVIWRSGTAVSLYRGVSYEVPS-VQLNKRIYKRNELPAS-----SVSQATDKQIHKQ 372

Query: 182  MEDFHEGVSAEVDK--------------------------RKDLQLPPESHYDKEIDKLL 283
            +      +SA  DK                           ++     E  Y+ E++KLL
Sbjct: 373  ISMSGNSLSAAADKTAQDPSNFDSYNNVHVTQVNLETASEEQETDFVREVKYEDEVEKLL 432

Query: 284  DDLGPRYTDWPGNGPPPVDADLLPGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVL 463
            D LGPRYTDWPG  P PVDAD+LPG+VPGY+PPFR+LPYGV+ TL  KE T L+RL+RVL
Sbjct: 433  DGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVL 492

Query: 464  PPHFALGRSRRHQGLALAIVKLWEKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSR 643
            PPHFALGRSR+ QGLA+A++KLWEKSSIAKI+LKRGVQLT+SERM E+IKKLTGG +LSR
Sbjct: 493  PPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSR 552

Query: 644  NKDYIVIYRGKDFLSPEITEALLERERLAKTLQDEEEQARLRASSSVALNDMSVIEPGIA 823
            NKD++V YRGK+FLSP++TEAL ERERLAK+LQDEEEQARLRAS+ V  +  ++ + G A
Sbjct: 553  NKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTA 612

Query: 824  GTLGETLEAHARWGNDIDDDHANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLA 1003
            GTL ETL+A++RWG  +DD H   +VR AE+ RHA +V+KLE+ L  AE+K+ +A R L+
Sbjct: 613  GTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALS 672

Query: 1004 KVEESLKPAEHVKDPEPITEEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRE 1183
            KVEESLKPAE   DPE IT EERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRE
Sbjct: 673  KVEESLKPAERQADPESITNEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRE 732

Query: 1184 LVKIIIKAKTFSQVKNVALALEAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNL 1363
            LVKII+K KTF Q K +ALALEAESGGVLV VDK+SKG+A+VVYRG+DY RP TLRPKNL
Sbjct: 733  LVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNL 792

Query: 1364 LTKRKALARSIELQRREALNRHISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYC 1543
            LTKRKALARSIELQR+EAL +H++ L+    +LRSE+ QM+  K  GDE+LY KLDSAY 
Sbjct: 793  LTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYA 852

Query: 1544 S 1546
            +
Sbjct: 853  T 853


>ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521987|gb|ESR33354.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 860

 Score =  652 bits (1681), Expect = 0.0
 Identities = 338/541 (62%), Positives = 414/541 (76%), Gaps = 26/541 (4%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRDTYSLAQASEFSRGNH 181
            TGGLVIWRSGT++SLYRGV+YE+P  V++  +  +R  L +      S++QA++      
Sbjct: 319  TGGLVIWRSGTAVSLYRGVSYEVPS-VQLNKRIYKRNELPAS-----SVSQATDKQIHKQ 372

Query: 182  MEDFHEGVSAEVDK--------------------------RKDLQLPPESHYDKEIDKLL 283
            +      +SA  DK                           ++     E  Y+ E++KLL
Sbjct: 373  ISMSGNSLSAAADKTAQDPSNFDSYNNVHVTQVNLETASEEQETDFVREVKYEDEVEKLL 432

Query: 284  DDLGPRYTDWPGNGPPPVDADLLPGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVL 463
            D LGPRYTDWPG  P PVDAD+LPG+VPGY+PPFR+LPYGV+ TL  KE T L+RL+RVL
Sbjct: 433  DGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVL 492

Query: 464  PPHFALGRSRRHQGLALAIVKLWEKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSR 643
            PPHFALGRSR+ QGLA+A++KLWEKSSIAKI+LKRGVQLT+SERM E+IKKLTGG +LSR
Sbjct: 493  PPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSR 552

Query: 644  NKDYIVIYRGKDFLSPEITEALLERERLAKTLQDEEEQARLRASSSVALNDMSVIEPGIA 823
            NKD++V YRGK+FLSP++TEAL ERERLAK+LQDEEEQARLRAS+ V  +  ++ + G A
Sbjct: 553  NKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTA 612

Query: 824  GTLGETLEAHARWGNDIDDDHANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLA 1003
            GTL ETL+A++RWG  +DD H   +VR AE+ RHA +V+KLE+ L  AE+K+ +A R L+
Sbjct: 613  GTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALS 672

Query: 1004 KVEESLKPAEHVKDPEPITEEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRE 1183
            KVEESLKPAE   DPE IT EERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRE
Sbjct: 673  KVEESLKPAERQADPESITNEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRE 732

Query: 1184 LVKIIIKAKTFSQVKNVALALEAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNL 1363
            LVKII+K KTF Q K +ALALEAESGGVLV VDK+SKG+A+VVYRG+DY RP TLRPKNL
Sbjct: 733  LVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNL 792

Query: 1364 LTKRKALARSIELQRREALNRHISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYC 1543
            LTKRKALARSIELQR+EAL +H++ L+    +LRSE+ QM+  K  GDE+LY KLDSAY 
Sbjct: 793  LTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYA 852

Query: 1544 S 1546
            +
Sbjct: 853  T 853


>ref|XP_003577404.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Brachypodium distachyon]
          Length = 881

 Score =  651 bits (1680), Expect = 0.0
 Identities = 334/540 (61%), Positives = 418/540 (77%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRDTYSLAQASEFSRGNH 181
            TGGLVIWRSGTS+SLYRGV Y++P+  K   ++ +  G+ S   +   +  +    + N 
Sbjct: 237  TGGLVIWRSGTSVSLYRGVAYDVPETTKGTNRNWQALGMKS-SINIPPMPSSLPNEKVNG 295

Query: 182  MEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDADLLPGV 361
            M+D    + A  +  +  +  PE  Y++EID+LLD+LGPRY+DWPG+ P PVDADLLP  
Sbjct: 296  MQDRVGALVAVTENEETAETVPEIKYEEEIDRLLDELGPRYSDWPGSNPLPVDADLLPAT 355

Query: 362  VPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIVKLWEKS 541
            VPGY+PPFR+LPYGV+R+L  K+ T LRRL R LPPHFALGRSR+ QGLA A+VKLWE+S
Sbjct: 356  VPGYKPPFRVLPYGVRRSLSRKDTTNLRRLGRGLPPHFALGRSRQLQGLAAAMVKLWERS 415

Query: 542  SIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITEALLERE 721
            SIAKI+LKRGVQLT+SERMAE++KKLTGG +LSRN D++V YRGKDFLS E+ E LLERE
Sbjct: 416  SIAKIALKRGVQLTTSERMAEDLKKLTGGVMLSRNNDFVVFYRGKDFLSSELAEVLLERE 475

Query: 722  RLAKTLQDEEEQARLRASSSVALNDMSVIEPGIAGTLGETLEAHARWGNDIDDDHANKMV 901
            R  K+LQDEE QARL  + S A +  + IEP +AGTL ETLEA++++GN +D++H +KM 
Sbjct: 476  RSMKSLQDEE-QARLDRTPSFASSTEAFIEPSVAGTLEETLEANSKYGNKVDENHMDKMT 534

Query: 902  RAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPEPITEEERFMF 1081
            +  E  +HA++VRKLE  L +AE+++ KA RVL KVE +LKP+E     E ITEEERFMF
Sbjct: 535  KTVEAAKHADVVRKLEWKLSLAEKRIAKAERVLGKVETALKPSEDTNPHETITEEERFMF 594

Query: 1082 RKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKNVALALEAESG 1261
            RKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKI++K K+F++VK +AL+LE ESG
Sbjct: 595  RKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKVKSFTEVKRIALSLEVESG 654

Query: 1262 GVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRREALNRHISNL 1441
            G+LV VDKVSKG+AIVV+RG+DY RP  LRP+NLL+KRKALARSIE+QR +ALNRHI  L
Sbjct: 655  GILVSVDKVSKGYAIVVFRGKDYRRPSMLRPRNLLSKRKALARSIEIQRMQALNRHIGKL 714

Query: 1442 QKKVDQLRSELAQMDLAKDQGDEELYAKLDSAYCSXXXXXXXXXXXXAYLNTLNSDVAVD 1621
             ++V+QLRSEL Q++ AKDQGD ELYAKLDSAY S            AYL + +S V  D
Sbjct: 715  NRRVNQLRSELVQIEGAKDQGDVELYAKLDSAY-SSEDEDVEDEDDEAYLRSFDSAVGRD 773


>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score =  649 bits (1673), Expect = 0.0
 Identities = 338/523 (64%), Positives = 410/523 (78%), Gaps = 10/523 (1%)
 Frame = +2

Query: 2    TGGLVIWRSGTSISLYRGVTYEIPQPVKIRYQSPERAGLNSFKRDTYSLAQASE------ 163
            TGGLV+WRSGTS+SLYRGV+YE+P  V++  Q  +R  ++S    T +    +E      
Sbjct: 291  TGGLVVWRSGTSLSLYRGVSYEVPS-VQLNKQIFKRNEISSTSLPTVADKSVAEPYVCAT 349

Query: 164  FSRGNHMEDFHEGVSAEVDKRKDLQLPPESHYDKEIDKLLDDLGPRYTDWPGNGPPPVDA 343
            +S      +  E  S E +  + L   PE  Y+ E+D+LLD +GPR+ DWPG  P PVDA
Sbjct: 350  YSNVKTPLEMSENASQETEDTEQL---PEVKYEDEVDELLDSIGPRFKDWPGCDPLPVDA 406

Query: 344  DLLPGVVPGYEPPFRILPYGVKRTLGLKEGTALRRLSRVLPPHFALGRSRRHQGLALAIV 523
            D+LPG+VPG++PPFRILPYGV+ TLGLKE T+LRRL+RVLPPHFALGR+R+ QGLA+A+ 
Sbjct: 407  DMLPGIVPGFQPPFRILPYGVRSTLGLKEATSLRRLARVLPPHFALGRNRQLQGLAVAMS 466

Query: 524  KLWEKSSIAKISLKRGVQLTSSERMAEEIKKLTGGAILSRNKDYIVIYRGKDFLSPEITE 703
            KLWE+S IAKI+LKRGVQLT+SERMAE+IKKLTGG +LSRNKD++V YRGK+FLS E+TE
Sbjct: 467  KLWERSLIAKIALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSAEVTE 526

Query: 704  ALLERERLAKTLQDEEEQARLRASSSVALNDMSVIEP----GIAGTLGETLEAHARWGND 871
            AL+ERERLAK+LQDEEEQARLRAS+ V    M  IEP    G AGTLGETL+A A+WG  
Sbjct: 527  ALVERERLAKSLQDEEEQARLRASAMV----MPSIEPAQHFGTAGTLGETLDADAKWGKR 582

Query: 872  IDDDHANKMVRAAEMTRHANIVRKLERNLLIAEQKVDKAGRVLAKVEESLKPAEHVKDPE 1051
            +D  H  K+ + A + RHA +VRKLE+ L  AE+K+  A + L+KVEESLKP++   DPE
Sbjct: 583  LDVHHKEKVTQEAGILRHAKLVRKLEQKLAFAERKLMGAEQALSKVEESLKPSKQQADPE 642

Query: 1052 PITEEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIIKAKTFSQVKN 1231
             IT+EERFMFRKLGL+MKAFLLLGRRGVFDGT+ENMHLHWKYRELVKI++ AK F QVK 
Sbjct: 643  SITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKNFDQVKK 702

Query: 1232 VALALEAESGGVLVCVDKVSKGFAIVVYRGRDYHRPPTLRPKNLLTKRKALARSIELQRR 1411
            +ALALEAESGGVLV VDKVSK +AI+VYRG DY RP  LRPKNLLTKRKALARSIELQR+
Sbjct: 703  IALALEAESGGVLVSVDKVSKKYAIIVYRGNDYQRPSMLRPKNLLTKRKALARSIELQRQ 762

Query: 1412 EALNRHISNLQKKVDQLRSELAQMDLAKDQGDEELYAKLDSAY 1540
            EAL +HI+ +Q +VD+LRSE+ QMD  K  GDE LY KLDS Y
Sbjct: 763  EALLKHIAAVQSRVDRLRSEIEQMDTVKHHGDEALYNKLDSCY 805