BLASTX nr result
ID: Zingiber24_contig00017722
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00017722
(706 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAK07775.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 6e-08
ref|XP_004969517.1| PREDICTED: pentatricopeptide repeat-containi... 63 8e-08
gb|EMT04525.1| hypothetical protein F775_19583 [Aegilops tauschii] 62 2e-07
ref|XP_003566988.1| PREDICTED: pentatricopeptide repeat-containi... 59 2e-06
gb|AFW83548.1| hypothetical protein ZEAMMB73_840071 [Zea mays] 58 3e-06
dbj|BAD73375.1| pentatricopeptide (PPR) repeat-containing protei... 57 6e-06
ref|NP_001043842.2| Os01g0674700 [Oryza sativa Japonica Group] g... 57 6e-06
gb|EEE55166.1| hypothetical protein OsJ_02981 [Oryza sativa Japo... 57 6e-06
gb|EEC71257.1| hypothetical protein OsI_03237 [Oryza sativa Indi... 57 6e-06
ref|XP_002456122.1| hypothetical protein SORBIDRAFT_03g030920 [S... 56 1e-05
>dbj|BAK07775.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 969
Score = 63.5 bits (153), Expect = 6e-08
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 12/190 (6%)
Frame = +1
Query: 28 NRPMGLLGSGDCRSFSRNAWSNVSSFQGISILPRRFLGXXXXXXXXXXXXXXXGGSSKGR 207
N MGLL G C + N S+ G ++PRR + G +GR
Sbjct: 7 NASMGLLNLGGCGVLLPSLQPNSSAGHGF-LVPRRDVSALPLSW---------GLVRRGR 56
Query: 208 IFCA-------FEIEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSRHTGDGEE 366
+ A + G+ S+ R +EKE TF+P F DYVK++ESV+ DRS+ G+
Sbjct: 57 VLDAGFGAAGALASGEAGAGSSELRHIEKELTFSPTFTDYVKMMESVKLDRSKSLQGGDS 116
Query: 367 EGSKKRPVNKGKSFR-----MKQQHRSVRNDDSKQRPNAVENSSRSERVAVRGRNKDLED 531
+G R G R + + +S QR + R ER+ + GR ++
Sbjct: 117 DGRSSRRRFDGDGRREDRESIDPRKKSFERKTGSQRERG-RDQGRGERLPMNGRTEEFTG 175
Query: 532 ATRSITNRSE 561
+ N S+
Sbjct: 176 LVGDVKNSSD 185
>ref|XP_004969517.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Setaria italica]
Length = 967
Score = 63.2 bits (152), Expect = 8e-08
Identities = 55/190 (28%), Positives = 80/190 (42%), Gaps = 11/190 (5%)
Frame = +1
Query: 28 NRPMGLLGSGDCRSFSRNAWSNVSSFQG-------ISILPRRFLGXXXXXXXXXXXXXXX 186
N MGLL C S N S +G +S+LP R+
Sbjct: 6 NASMGLLSLSGCGSLLPTPQPNSSQGRGFSVPGRSVSVLPLRW-----------GLARKR 54
Query: 187 GGSSKGRIFCAFEIEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSR--HTGDG 360
G R A + G+ S+ R +EKE TF+P F DYVK++ESV+ DRS+ H D
Sbjct: 55 GRVLDSRTDGAVAGGESGAGSSELRHIEKELTFSPTFTDYVKIMESVKLDRSKNLHGSDS 114
Query: 361 EEEGSKKRPVNKGKSFRMKQQHRSVRNDDSKQRPNAVENSSRSERVAVRGRNKDL--EDA 534
+ S++R G +H R+ D++ +P R R + GR L +D
Sbjct: 115 DSRSSRRRFTGDG------DRHGDGRSGDARNKPFERNQGPRRNRRSDIGRVVKLAKDDN 168
Query: 535 TRSITNRSER 564
+ +T ER
Sbjct: 169 QKDVTGFVER 178
>gb|EMT04525.1| hypothetical protein F775_19583 [Aegilops tauschii]
Length = 901
Score = 61.6 bits (148), Expect = 2e-07
Identities = 59/220 (26%), Positives = 86/220 (39%), Gaps = 24/220 (10%)
Frame = +1
Query: 37 MGLLGSGDCRSFSRNAWSNVSSFQGISILPRRFLGXXXXXXXXXXXXXXXGGSSKGRIFC 216
MGLL G C F + N SS + PRR + G +
Sbjct: 10 MGLLNLGGCGVFLPSLQPN-SSAGHCFLAPRRDVSALGLVRRGRFLDAGFGAAG------ 62
Query: 217 AFEIEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRS---------------RHT 351
A + G+ S+ R +EKE TF+P F DYVK++ESV+ DRS R T
Sbjct: 63 ALASGEAGAGSSELRHIEKELTFSPTFTDYVKMMESVKLDRSKSLQGGDSDGRSSRRRFT 122
Query: 352 GDGEE----EGSKKRPVNKGKSFRMKQQHRSVRNDDSKQRPNAVENSSRSERVAVRGRN- 516
GDG+ G ++ + KSF + + R D + N S E + G+
Sbjct: 123 GDGDASAGGRGDRESVDPRKKSFERNRGAQRDRGGDQVRGGRLAMNDSAEEFTGLVGKGM 182
Query: 517 ----KDLEDATRSITNRSERFSIRVRTKDLEDATGSKRNK 624
K+ D R + +R +R + D+T S K
Sbjct: 183 VGDVKNSSDGQRKVEEYVQRRIVRGERSRIGDSTDSDDRK 222
>ref|XP_003566988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Brachypodium distachyon]
Length = 976
Score = 58.9 bits (141), Expect = 2e-06
Identities = 57/191 (29%), Positives = 84/191 (43%), Gaps = 51/191 (26%)
Frame = +1
Query: 232 DMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSRHTGDGEEEG--SKKRPVNKG-- 399
+ G+ S+ R +EKE TF+P F DYVK++ESV+ DRS+ + G+ +G S++R V G
Sbjct: 69 EAGTGSSELRHIEKELTFSPTFTDYVKMMESVKLDRSKSSQGGDSDGRSSRRRFVGDGDA 128
Query: 400 ---------------KSFRMK------------QQHRSVRNDDSKQRPNAV--------E 474
+SF K ++ RS ND +K V E
Sbjct: 129 SVGRRVDRELGDPRNQSFERKRGAHRDRGSERGREERSANNDIAKNFTGLVERRMSTDAE 188
Query: 475 NSSRS--------ERVAVRGRNKDLEDATRSITNRSERFSIRVRTKDLED----ATGSKR 618
NSS +R VRG D+T + N +F+ V+TKD D + G++
Sbjct: 189 NSSYRQGKVEEYVQRRIVRGERSKTGDSTDN--NGRRQFASYVKTKDNRDSMVESAGNRH 246
Query: 619 NKSADRWGLDE 651
S R L E
Sbjct: 247 AHSNARKDLQE 257
>gb|AFW83548.1| hypothetical protein ZEAMMB73_840071 [Zea mays]
Length = 956
Score = 57.8 bits (138), Expect = 3e-06
Identities = 57/211 (27%), Positives = 82/211 (38%), Gaps = 23/211 (10%)
Frame = +1
Query: 28 NRPMGLLGSGDCRSFSRNAWSNVSSFQGISILPRRFLGXXXXXXXXXXXXXXXGGSSKGR 207
N MG L G C + N +G SI R S G
Sbjct: 6 NASMGPLSLGGCGALLSTPQPNSWHCRGFSIPERSVFMLPLRRGLSRKRGWVLDSRSNG- 64
Query: 208 IFCAFEIEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRS-------------RH 348
A +++G+ S+ R +EKE TF+P F DYVK++ESV+ DRS R
Sbjct: 65 ---AVARDEVGAGSSELRHIEKELTFSPTFTDYVKIMESVKLDRSKNLHGADGQSLRRRF 121
Query: 349 TGDGEEEGSKKRPVNKGKSFRMKQ--QHRSVRNDDSKQRPNAVENSSRSERVAVRGRNKD 522
GDG + + + KSF Q Q ++++ K V+ + + R +
Sbjct: 122 AGDGRQRNRRSGDA-RNKSFERNQGPQRDLAKDENQKDVTGFVDKRATGHVKSSNRRQGE 180
Query: 523 LED-ATRSITNRSER-------FSIRVRTKD 591
+ED A R I R FS V+ KD
Sbjct: 181 VEDYAQRRIIRGGTRGNGDNGQFSSPVKAKD 211
>dbj|BAD73375.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group] gi|56202015|dbj|BAD73522.1|
pentatricopeptide (PPR) repeat-containing protein-like
[Oryza sativa Japonica Group]
Length = 988
Score = 57.0 bits (136), Expect = 6e-06
Identities = 40/132 (30%), Positives = 58/132 (43%)
Frame = +1
Query: 214 CAFEIEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSRHTGDGEEEGSKKRPVN 393
CA + G S+ R +EKE TF+P F DYVK++ESV+ DRS+ E +G R
Sbjct: 73 CAVAGGEAGPGSSELRHVEKELTFSPTFTDYVKIMESVKLDRSKSLESTESDGRSSRRRF 132
Query: 394 KGKSFRMKQQHRSVRNDDSKQRPNAVENSSRSERVAVRGRNKDLEDATRSITNRSERFSI 573
G + R+ D + + S+ R V R+ A I N S R
Sbjct: 133 TGDGDAPVVRRGDERSGDGRSTSFDRQKGSQRNRGDVNERSM----ANNDIQNNSIRLVE 188
Query: 574 RVRTKDLEDATG 609
+ + D+E G
Sbjct: 189 KKKPGDVEKRRG 200
>ref|NP_001043842.2| Os01g0674700 [Oryza sativa Japonica Group]
gi|255673547|dbj|BAF05756.2| Os01g0674700 [Oryza sativa
Japonica Group]
Length = 514
Score = 57.0 bits (136), Expect = 6e-06
Identities = 40/132 (30%), Positives = 58/132 (43%)
Frame = +1
Query: 214 CAFEIEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSRHTGDGEEEGSKKRPVN 393
CA + G S+ R +EKE TF+P F DYVK++ESV+ DRS+ E +G R
Sbjct: 73 CAVAGGEAGPGSSELRHVEKELTFSPTFTDYVKIMESVKLDRSKSLESTESDGRSSRRRF 132
Query: 394 KGKSFRMKQQHRSVRNDDSKQRPNAVENSSRSERVAVRGRNKDLEDATRSITNRSERFSI 573
G + R+ D + + S+ R V R+ A I N S R
Sbjct: 133 TGDGDAPVVRRGDERSGDGRSTSFDRQKGSQRNRGDVNERSM----ANNDIQNNSIRLVE 188
Query: 574 RVRTKDLEDATG 609
+ + D+E G
Sbjct: 189 KKKPGDVEKRRG 200
>gb|EEE55166.1| hypothetical protein OsJ_02981 [Oryza sativa Japonica Group]
Length = 994
Score = 57.0 bits (136), Expect = 6e-06
Identities = 40/132 (30%), Positives = 58/132 (43%)
Frame = +1
Query: 214 CAFEIEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSRHTGDGEEEGSKKRPVN 393
CA + G S+ R +EKE TF+P F DYVK++ESV+ DRS+ E +G R
Sbjct: 73 CAVAGGEAGPGSSELRHVEKELTFSPTFTDYVKIMESVKLDRSKSLESTESDGRSSRRRF 132
Query: 394 KGKSFRMKQQHRSVRNDDSKQRPNAVENSSRSERVAVRGRNKDLEDATRSITNRSERFSI 573
G + R+ D + + S+ R V R+ A I N S R
Sbjct: 133 TGDGDAPVVRRGDERSGDGRSTSFDRQKGSQRNRGDVNERSM----ANNDIQNNSIRLVE 188
Query: 574 RVRTKDLEDATG 609
+ + D+E G
Sbjct: 189 KKKPGDVEKRRG 200
>gb|EEC71257.1| hypothetical protein OsI_03237 [Oryza sativa Indica Group]
Length = 994
Score = 57.0 bits (136), Expect = 6e-06
Identities = 40/132 (30%), Positives = 58/132 (43%)
Frame = +1
Query: 214 CAFEIEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSRHTGDGEEEGSKKRPVN 393
CA + G S+ R +EKE TF+P F DYVK++ESV+ DRS+ E +G R
Sbjct: 73 CAVAGGEAGPGSSELRHVEKELTFSPTFTDYVKIMESVKLDRSKSLESTESDGRSSRRRF 132
Query: 394 KGKSFRMKQQHRSVRNDDSKQRPNAVENSSRSERVAVRGRNKDLEDATRSITNRSERFSI 573
G + R+ D + + S+ R V R+ A I N S R
Sbjct: 133 TGDGDAPVVRRGDERSGDGRSTSFDRQKGSQRNRGDVNERSM----ANNDIQNNSIRLVE 188
Query: 574 RVRTKDLEDATG 609
+ + D+E G
Sbjct: 189 KKKPGDVEKRRG 200
>ref|XP_002456122.1| hypothetical protein SORBIDRAFT_03g030920 [Sorghum bicolor]
gi|241928097|gb|EES01242.1| hypothetical protein
SORBIDRAFT_03g030920 [Sorghum bicolor]
Length = 937
Score = 56.2 bits (134), Expect = 1e-05
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 5/182 (2%)
Frame = +1
Query: 28 NRPMGLLGSGDCRSFSRNAWSNVSSFQGISILPRRFLGXXXXXXXXXXXXXXXGGSSKGR 207
N MGLL G C + N +G ++P R L KGR
Sbjct: 6 NASMGLLSLGGCGALLPTPQPNSCHGRGF-LVPERSLSMLPLRWGL--------SRKKGR 56
Query: 208 IFC-----AFEIEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSRHTGDGEEEG 372
+ A +G+ S+ R +EKE TF+P F DYVK++ESV+ DRS++ + +G
Sbjct: 57 VLDSRSDGAVAGGGVGTGSSELRHIEKELTFSPTFTDYVKIMESVKLDRSKNIHGADSDG 116
Query: 373 SKKRPVNKGKSFRMKQQHRSVRNDDSKQRPNAVENSSRSERVAVRGRNKDLEDATRSITN 552
R + F + + R+ D++ +P E + R + N+ +D T +
Sbjct: 117 RSSR-----RRFTGDDRRTNRRSGDARNKP--FERNQGPRRDLTKDENQ--KDVTGFVDK 167
Query: 553 RS 558
R+
Sbjct: 168 RA 169