BLASTX nr result

ID: Zingiber24_contig00017639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00017639
         (289 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY08489.1| Plant U-box 24 [Theobroma cacao]                       103   2e-20
gb|ESW22014.1| hypothetical protein PHAVU_005G119200g [Phaseolus...   101   9e-20
ref|XP_003540819.1| PREDICTED: E3 ubiquitin-protein ligase PUB24...   101   9e-20
ref|XP_003540288.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   101   9e-20
dbj|BAF02552.1| hypothetical protein [Nicotiana benthamiana]          101   1e-19
ref|XP_003539150.1| PREDICTED: E3 ubiquitin-protein ligase PUB24...   100   2e-19
gb|EOY33282.1| Plant U-box 24, putative [Theobroma cacao]             100   3e-19
gb|EMJ04450.1| hypothetical protein PRUPE_ppa019526mg [Prunus pe...   100   3e-19
ref|XP_003520715.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   100   3e-19
ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus comm...   100   3e-19
ref|XP_002323383.1| U-box domain-containing family protein [Popu...   100   3e-19
ref|XP_002308324.2| hypothetical protein POPTR_0006s21920g [Popu...    99   6e-19
ref|XP_004140266.1| PREDICTED: E3 ubiquitin-protein ligase PUB22...    99   6e-19
ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24...    99   6e-19
emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]    99   6e-19
ref|XP_004241334.1| PREDICTED: E3 ubiquitin-protein ligase PUB24...    98   1e-18
ref|XP_006494890.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...    98   1e-18
ref|XP_006424087.1| hypothetical protein CICLE_v10028564mg [Citr...    98   1e-18
ref|XP_004497654.1| PREDICTED: E3 ubiquitin-protein ligase PUB24...    97   2e-18
ref|XP_003543415.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...    97   2e-18

>gb|EOY08489.1| Plant U-box 24 [Theobroma cacao]
          Length = 408

 Score =  103 bits (258), Expect = 2e-20
 Identities = 50/69 (72%), Positives = 55/69 (79%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQA 28
           MD  EVP +F+CPISLQIMKDPVT +TGITYDR SIE+WLL  +   CPVTQQPLP D  
Sbjct: 1   MDDIEVPKYFVCPISLQIMKDPVTAITGITYDRESIEQWLLKGKNTSCPVTQQPLPRDSD 60

Query: 27  LLTPNHTLR 1
            LTPNHTLR
Sbjct: 61  -LTPNHTLR 68


>gb|ESW22014.1| hypothetical protein PHAVU_005G119200g [Phaseolus vulgaris]
          Length = 413

 Score =  101 bits (252), Expect = 9e-20
 Identities = 47/65 (72%), Positives = 51/65 (78%)
 Frame = -2

Query: 195 EVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQALLTP 16
           E+P  F CPISLQIMKDPVTTVTGITYDR SIE WLL  +   CP+TQQPLP +   LTP
Sbjct: 5   EIPQFFACPISLQIMKDPVTTVTGITYDRESIEYWLLKAKNCTCPITQQPLPRNSEFLTP 64

Query: 15  NHTLR 1
           NHTLR
Sbjct: 65  NHTLR 69


>ref|XP_003540819.1| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Glycine max]
          Length = 404

 Score =  101 bits (252), Expect = 9e-20
 Identities = 45/69 (65%), Positives = 55/69 (79%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQA 28
           M+  E+P +F+CPIS QIM+DPVTTVTGITYDR SIE+WLL  +  +CPV++QPLP    
Sbjct: 1   MEEVEIPQYFVCPISFQIMEDPVTTVTGITYDRESIEQWLLKAKDCVCPVSKQPLPRSSQ 60

Query: 27  LLTPNHTLR 1
            LTPNHTLR
Sbjct: 61  YLTPNHTLR 69


>ref|XP_003540288.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max]
          Length = 427

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/65 (70%), Positives = 52/65 (80%)
 Frame = -2

Query: 195 EVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQALLTP 16
           E+P  F+CPISLQIMKDPVTTVTGITYDR SIE+WLL  +   CP+T+QPLP     LTP
Sbjct: 13  EIPQFFLCPISLQIMKDPVTTVTGITYDRESIEKWLLKAKDCTCPITKQPLPRSPEFLTP 72

Query: 15  NHTLR 1
           NHTLR
Sbjct: 73  NHTLR 77


>dbj|BAF02552.1| hypothetical protein [Nicotiana benthamiana]
          Length = 425

 Score =  101 bits (251), Expect = 1e-19
 Identities = 49/73 (67%), Positives = 55/73 (75%), Gaps = 4/73 (5%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRK----PICPVTQQPLP 40
           M+  E+P +F+CPISLQIMKDPVTTVTGITYDR SIE WLL   +      CPVT+QPLP
Sbjct: 1   MEEVEIPQYFLCPISLQIMKDPVTTVTGITYDRESIEMWLLTAEEETETAACPVTKQPLP 60

Query: 39  DDQALLTPNHTLR 1
            D  LLTPNH LR
Sbjct: 61  KDTELLTPNHMLR 73


>ref|XP_003539150.1| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Glycine max]
          Length = 417

 Score =  100 bits (249), Expect = 2e-19
 Identities = 44/65 (67%), Positives = 53/65 (81%)
 Frame = -2

Query: 195 EVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQALLTP 16
           E+P +F+CPIS QIM+DPVTTVTGITYDR SIE+WLL  +  +CPV++QPLP     LTP
Sbjct: 5   EIPQYFVCPISFQIMEDPVTTVTGITYDRESIEKWLLKAKDCVCPVSKQPLPRSSQYLTP 64

Query: 15  NHTLR 1
           NHTLR
Sbjct: 65  NHTLR 69


>gb|EOY33282.1| Plant U-box 24, putative [Theobroma cacao]
          Length = 405

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/69 (68%), Positives = 54/69 (78%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQA 28
           MD  ++P +F+CPISLQIMKDPVT VTGITYDR SIE+WL +     CPVT+QPLP D  
Sbjct: 1   MDEIDIPQYFLCPISLQIMKDPVTAVTGITYDRESIEQWLKIATDTTCPVTKQPLPSDSD 60

Query: 27  LLTPNHTLR 1
            LTPNHTLR
Sbjct: 61  -LTPNHTLR 68


>gb|EMJ04450.1| hypothetical protein PRUPE_ppa019526mg [Prunus persica]
          Length = 403

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/69 (68%), Positives = 53/69 (76%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQA 28
           MD  EVP +F+CPISLQIM+DPVT +TGITYDR SIE WL   +   CPVT+QPLP D  
Sbjct: 1   MDDIEVPQYFVCPISLQIMQDPVTAITGITYDRDSIEHWLFQSKNTTCPVTKQPLPRDSE 60

Query: 27  LLTPNHTLR 1
            LTPNHTLR
Sbjct: 61  -LTPNHTLR 68


>ref|XP_003520715.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max]
          Length = 296

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 47/68 (69%), Positives = 54/68 (79%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQA 28
           MD  EVP +FICPISLQIMKDPVTT+TGITYDR SIE WL  ++   CP+T+QPLP   +
Sbjct: 1   MDEIEVPKYFICPISLQIMKDPVTTITGITYDRDSIEHWLFTNKSTTCPITRQPLP-KHS 59

Query: 27  LLTPNHTL 4
            LTPNHTL
Sbjct: 60  DLTPNHTL 67


>ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223536623|gb|EEF38265.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 403

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/69 (69%), Positives = 54/69 (78%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQA 28
           MD  E+P +FICPISLQIMKDPVT +TGITYDR SIE+WL   +  ICPVT+Q LP D  
Sbjct: 1   MDDIEIPQYFICPISLQIMKDPVTIITGITYDRDSIEQWLFTTKNTICPVTKQSLPKDFD 60

Query: 27  LLTPNHTLR 1
            LTPNHTLR
Sbjct: 61  -LTPNHTLR 68


>ref|XP_002323383.1| U-box domain-containing family protein [Populus trichocarpa]
           gi|222868013|gb|EEF05144.1| U-box domain-containing
           family protein [Populus trichocarpa]
          Length = 408

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 49/69 (71%), Positives = 51/69 (73%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQA 28
           MD  EVP  FICPI LQIMKDPVTT+TGITYDR SIERWL       CPVT+Q LP D  
Sbjct: 1   MDDIEVPRFFICPIYLQIMKDPVTTITGITYDRESIERWLFTSENTTCPVTKQSLPKDSD 60

Query: 27  LLTPNHTLR 1
            LTPNHTLR
Sbjct: 61  -LTPNHTLR 68


>ref|XP_002308324.2| hypothetical protein POPTR_0006s21920g [Populus trichocarpa]
           gi|550336818|gb|EEE91847.2| hypothetical protein
           POPTR_0006s21920g [Populus trichocarpa]
          Length = 409

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 48/69 (69%), Positives = 52/69 (75%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQA 28
           MD  EVP  F+CPISLQIMKDPVTT+TGITYDR SIE WL   +   CPVT+QPL  D  
Sbjct: 1   MDDIEVPKFFVCPISLQIMKDPVTTITGITYDRESIEHWLFTSQNTACPVTKQPLQKDLD 60

Query: 27  LLTPNHTLR 1
            LTPNHTLR
Sbjct: 61  -LTPNHTLR 68


>ref|XP_004140266.1| PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Cucumis sativus]
           gi|449481188|ref|XP_004156108.1| PREDICTED: E3
           ubiquitin-protein ligase PUB22-like [Cucumis sativus]
          Length = 412

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 44/65 (67%), Positives = 52/65 (80%)
 Frame = -2

Query: 195 EVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQALLTP 16
           EVP +F+CPISLQ+M+DPVT  TGITYDR+SIE WL    K +CP+T+QPL  D  LLTP
Sbjct: 12  EVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSDPDLLTP 71

Query: 15  NHTLR 1
           NHTLR
Sbjct: 72  NHTLR 76


>ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Vitis vinifera]
          Length = 466

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 47/69 (68%), Positives = 55/69 (79%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQA 28
           MD  E+P +F+CPISLQIMKDPVT +TGITYDR SIE+WLL  +   CPVT+QPL  D  
Sbjct: 7   MDDIEIPQYFLCPISLQIMKDPVTAMTGITYDRESIEQWLLTAKDTTCPVTKQPLERD-F 65

Query: 27  LLTPNHTLR 1
           +LTPNHTLR
Sbjct: 66  VLTPNHTLR 74


>emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]
          Length = 437

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 47/69 (68%), Positives = 55/69 (79%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQA 28
           MD  E+P +F+CPISLQIMKDPVT +TGITYDR SIE+WLL  +   CPVT+QPL  D  
Sbjct: 7   MDDIEIPQYFLCPISLQIMKDPVTAMTGITYDRESIEQWLLTAKDTTCPVTKQPLERD-F 65

Query: 27  LLTPNHTLR 1
           +LTPNHTLR
Sbjct: 66  VLTPNHTLR 74


>ref|XP_004241334.1| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Solanum
           lycopersicum]
          Length = 420

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 47/70 (67%), Positives = 56/70 (80%), Gaps = 2/70 (2%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLV--DRKPICPVTQQPLPDD 34
           M+  E+P +F+CPISLQIMKDPVTTVTGITYDR +IE WLL+  ++   CPVT+Q LP D
Sbjct: 1   MEEVEIPKYFLCPISLQIMKDPVTTVTGITYDRENIETWLLMAEEKTSTCPVTKQILPRD 60

Query: 33  QALLTPNHTL 4
            ALLTPNH L
Sbjct: 61  TALLTPNHML 70


>ref|XP_006494890.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Citrus sinensis]
          Length = 405

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/69 (68%), Positives = 53/69 (76%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQA 28
           MD  EVP +FICPISLQIMKDPVT +TGI+YDR SIE+WL   +   CPVT+QPLP D  
Sbjct: 1   MDEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSG 60

Query: 27  LLTPNHTLR 1
            LT NHTLR
Sbjct: 61  -LTSNHTLR 68


>ref|XP_006424087.1| hypothetical protein CICLE_v10028564mg [Citrus clementina]
           gi|557526021|gb|ESR37327.1| hypothetical protein
           CICLE_v10028564mg [Citrus clementina]
          Length = 405

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/69 (68%), Positives = 53/69 (76%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQPLPDDQA 28
           MD  EVP +FICPISLQIMKDPVT +TGI+YDR SIE+WL   +   CPVT+QPLP D  
Sbjct: 1   MDEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSG 60

Query: 27  LLTPNHTLR 1
            LT NHTLR
Sbjct: 61  -LTSNHTLR 68


>ref|XP_004497654.1| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Cicer arietinum]
          Length = 410

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/70 (70%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = -2

Query: 207 MDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRK-PICPVTQQPLPDDQ 31
           MD  EVP +FICPISLQIMKDPVT +TGITYDR SIE WL  ++    CPVT+QPLP D 
Sbjct: 1   MDEIEVPQYFICPISLQIMKDPVTAITGITYDRDSIEHWLFTNKNTTYCPVTKQPLPLDS 60

Query: 30  ALLTPNHTLR 1
             LTPNHTLR
Sbjct: 61  D-LTPNHTLR 69


>ref|XP_003543415.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max]
          Length = 422

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 46/76 (60%), Positives = 53/76 (69%)
 Frame = -2

Query: 228 LFHRPGFMDSGEVPHHFICPISLQIMKDPVTTVTGITYDRASIERWLLVDRKPICPVTQQ 49
           + +    M   E P  F+CPISLQIMKDPVTTVTGITYDR SIE+WLL  +   CP+T+Q
Sbjct: 1   MLYESDIMTEIETPQFFLCPISLQIMKDPVTTVTGITYDRESIEQWLLKAKDCTCPITKQ 60

Query: 48  PLPDDQALLTPNHTLR 1
            LP     LTPNHTLR
Sbjct: 61  RLPRSTEFLTPNHTLR 76


Top